| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is arcC [H]
Identifier: 66045922
GI number: 66045922
Start: 3261073
End: 3262002
Strand: Direct
Name: arcC [H]
Synonym: Psyr_2686
Alternate gene names: 66045922
Gene position: 3261073-3262002 (Clockwise)
Preceding gene: 66045921
Following gene: 66045925
Centisome position: 53.52
GC content: 58.06
Gene sequence:
>930_bases ATGCGTATTGTCGTAGCTCTGGGCGGTAACGCCCTGCTTCGCCGTGGTCAACCCATGACGGCGGACAACCAGCGTGCCAA TATCCGAGTCGCCGCTGAACAAATCGCCAGGATATACCCGGGTAATCAACTGGTCATCGCCCACGGCAACGGACCGCAAG TAGGTTTGCTGTCTCTGCAAGCGGCAGCCTACACGCCGGTTTCGCCCTATCCGCTCGACGTACTGGGTGCCGAAACGGAG GGCATGATCGGCTATATGATCGAACAGGAACTGGGCAACCTGCTGGACTTCGAGGTGCCCTTCGCTACCTTGCTCACGCA GGTTGAAGTGGATCCGGCGGATCCCGCCTTCAACAATCCAGGCAAACCTGTCGGCCCGGTATACACCCAGGCCGAAGCTG AACGACTGGCTGCCGAAAAGGGCTGGGCCATCGCTCCGGATGGTGATAAATACCGACGCGTGGTGGCCAGCCCACGACCT AAACGCATCTTTGAAATTCGCCCTGTCAAATGGCTGCTTGAGAAAGGCTGCATCGTGATCTGCGCGGGTGGTGGCGGCAT CCCGACCATTTATACCGCGTCTGGCAAACTGACGGGTGTCGAGGCCGTCATCGACAAGGATCTGTGTTCGGCAATGCTGG CTGAAGAACTCGAAAGTGATTTGCTGCTGATTGCCACTGACGTCAATGCCGCCTACGTTGATTTCGGCAAACCAACCCAG AAAGCAATCGGTCAGGCGCACCCTGACGAAATGGACAAATTGGGATTTGCTGTGGGGTCCATGGGGCCCAAGGTTCAGGC CGCCTGCGAATTCGCCCGCCATACGGGAAAAGTTGCCGCTATCGGATCACTTTCCGACATTGAAGCGATCGTCCAGGGGC ACGCGGGTACGCGCATCAGTACCGGGCAACCGGGTATCAACTACCGGTAG
Upstream 100 bases:
>100_bases ATTTAAGCGCCAGCCTTCTTTCTGCCACCAGACTGCCCAACTGCAGCACATATTTGATGCCGATGCTGCAGTGGCTTTCG AACGCCTACAGGACTGTACT
Downstream 100 bases:
>100_bases TGCATGCCAGCCGTATGTATCGGCTGGCTTTTGCCGCGGAAGGCTGATCCCCTGACTGATCAGGCGACCGGCAAAGATCA TCAGCATGGCGAACAGACTC
Product: carbamate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MRIVVALGGNALLRRGQPMTADNQRANIRVAAEQIARIYPGNQLVIAHGNGPQVGLLSLQAAAYTPVSPYPLDVLGAETE GMIGYMIEQELGNLLDFEVPFATLLTQVEVDPADPAFNNPGKPVGPVYTQAEAERLAAEKGWAIAPDGDKYRRVVASPRP KRIFEIRPVKWLLEKGCIVICAGGGGIPTIYTASGKLTGVEAVIDKDLCSAMLAEELESDLLLIATDVNAAYVDFGKPTQ KAIGQAHPDEMDKLGFAVGSMGPKVQAACEFARHTGKVAAIGSLSDIEAIVQGHAGTRISTGQPGINYR
Sequences:
>Translated_309_residues MRIVVALGGNALLRRGQPMTADNQRANIRVAAEQIARIYPGNQLVIAHGNGPQVGLLSLQAAAYTPVSPYPLDVLGAETE GMIGYMIEQELGNLLDFEVPFATLLTQVEVDPADPAFNNPGKPVGPVYTQAEAERLAAEKGWAIAPDGDKYRRVVASPRP KRIFEIRPVKWLLEKGCIVICAGGGGIPTIYTASGKLTGVEAVIDKDLCSAMLAEELESDLLLIATDVNAAYVDFGKPTQ KAIGQAHPDEMDKLGFAVGSMGPKVQAACEFARHTGKVAAIGSLSDIEAIVQGHAGTRISTGQPGINYR >Mature_309_residues MRIVVALGGNALLRRGQPMTADNQRANIRVAAEQIARIYPGNQLVIAHGNGPQVGLLSLQAAAYTPVSPYPLDVLGAETE GMIGYMIEQELGNLLDFEVPFATLLTQVEVDPADPAFNNPGKPVGPVYTQAEAERLAAEKGWAIAPDGDKYRRVVASPRP KRIFEIRPVKWLLEKGCIVICAGGGGIPTIYTASGKLTGVEAVIDKDLCSAMLAEELESDLLLIATDVNAAYVDFGKPTQ KAIGQAHPDEMDKLGFAVGSMGPKVQAACEFARHTGKVAAIGSLSDIEAIVQGHAGTRISTGQPGINYR
Specific function: Arginine degradation via arginine deiminase; third step. [C]
COG id: COG0549
COG function: function code E; Carbamate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786732, Length=298, Percent_Identity=51.006711409396, Blast_Score=280, Evalue=6e-77, Organism=Escherichia coli, GI1789238, Length=312, Percent_Identity=41.025641025641, Blast_Score=184, Evalue=9e-48, Organism=Escherichia coli, GI1786516, Length=309, Percent_Identity=38.8349514563107, Blast_Score=171, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR003964 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.2 [H]
Molecular weight: Translated: 32755; Mature: 32755
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVVALGGNALLRRGQPMTADNQRANIRVAAEQIARIYPGNQLVIAHGNGPQVGLLSLQ CEEEEEECCCHHHHCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCEEEEEEE AAAYTPVSPYPLDVLGAETEGMIGYMIEQELGNLLDFEVPFATLLTQVEVDPADPAFNNP EHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCEECCCCHHHHHEEEECCCCCCCCCCC GKPVGPVYTQAEAERLAAEKGWAIAPDGDKYRRVVASPRPKRIFEIRPVKWLLEKGCIVI CCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHCCCCCCEEEEECCHHHHHHCCCEEE CAGGGGIPTIYTASGKLTGVEAVIDKDLCSAMLAEELESDLLLIATDVNAAYVDFGKPTQ EECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHH KAIGQAHPDEMDKLGFAVGSMGPKVQAACEFARHTGKVAAIGSLSDIEAIVQGHAGTRIS HHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEC TGQPGINYR CCCCCCCCC >Mature Secondary Structure MRIVVALGGNALLRRGQPMTADNQRANIRVAAEQIARIYPGNQLVIAHGNGPQVGLLSLQ CEEEEEECCCHHHHCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCEEEEEEE AAAYTPVSPYPLDVLGAETEGMIGYMIEQELGNLLDFEVPFATLLTQVEVDPADPAFNNP EHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCEECCCCHHHHHEEEECCCCCCCCCCC GKPVGPVYTQAEAERLAAEKGWAIAPDGDKYRRVVASPRPKRIFEIRPVKWLLEKGCIVI CCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHCCCCCCEEEEECCHHHHHHCCCEEE CAGGGGIPTIYTASGKLTGVEAVIDKDLCSAMLAEELESDLLLIATDVNAAYVDFGKPTQ EECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHH KAIGQAHPDEMDKLGFAVGSMGPKVQAACEFARHTGKVAAIGSLSDIEAIVQGHAGTRIS HHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCEEC TGQPGINYR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2537202; 10984043 [H]