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The map label for this gene is arcD [H]

Identifier: 66045919

GI number: 66045919

Start: 3257181

End: 3258608

Strand: Direct

Name: arcD [H]

Synonym: Psyr_2683

Alternate gene names: 66045919

Gene position: 3257181-3258608 (Clockwise)

Preceding gene: 66045917

Following gene: 66045920

Centisome position: 53.45

GC content: 53.64

Gene sequence:

>1428_bases
ATGTCGACGCCCCCTGGAAAACTGAGATTGGGTGCTTTAGTCGCTCTGGTGGTCGGCTCAATGATTGGTGGAGGAATCTT
TTCCCTGCCACAGAATATGGCCGCCAGTGCAGAAGTAGGTGCTGTGCTGGTTGGCTGGGCCATCACCGCAATTGGCATGC
TGACGCTGGCATTCGTTTTTCAAACGCTGGCGAATCGCAAGCCCGATCTGGACGGTGGTGTCTACGTTTACGCCAAGGCT
GGTTTCGGCGACTACATGGGGTTCTCGTCCGCGTGGGGATACTGGATCAGCGCGTGGCTCGGCAATGTGGGTTACTTCGT
ACTGTTGTTCAGTACGCTGGGTTACTTTTTTCCTGTTTTTGGAGAGGGCAATACGGTTGCGGCGGTGATCGGGGCGTCAG
TGTTGCTCTGGGGCGTGCATTTTTTGGTGTTGCGCGGCATTCAGGAAGCAGCATTTATCAATCTGGTGACGACCGTTGCC
AAAGTGGTGCCGCTCATTTTATTCGTTTTGATAGCGGTCTTTGCATTCAAGCTGGATATTTTTACGACTGACATCTGGGG
CTTGGAAAAACCGGACATGGGCAGCGTGATGAACCAGGTTCGCCATATGATGCTGGTGACGGTATGGGTATTCATCGGTA
TTGAAGGTGCCAGTATCTTTTCTGCTCGGGCCAGCAAACGCAGTGATGTCGGCAAGGCGACGGTCATCGGTTTCATTACC
GTATTGCTGTTGCTGGTCCTGGTGAACGTATTATCACTGGGGGTCATGACCCAACCGGAACTGGCCAAACTGCAAAACCC
GTCAATGGCGGCTGTGCTCGAACATATAGTGGGTCCGTGGGGGGCTGCGCTGATCAGTGTAGGGCTGATCATTTCGCTGC
TTGGGGCTTTGCTGTCATGGGTGTTGCTCTGCGCCGAAATAATGTTCGCTGCCGCTAAAGACCATACAATGCCCGAGTTT
CTAAGCCGCGAAAATGCCAATCATGTGCCTGCCAATGCGCTGTGGCTGACTAACGCGATGGTGCAGGTTTTCCTGGTCAT
CACCCTCTTCTCGTCCAGTACTTACCTGTCGCTGATCTACCTGGCCACGTCGATGATCCTGATTCCTTATCTGTGGTCTG
CCGCGTATGCCCTGCGCCTGGCGATAGGAGGTGAAGGTTATGAAAACGCCAGACGCGAGCGCCGGAAAGATCTGTTCATC
GCGGCCGTCGCGCTTCTTTATGCCATTTGGTTGATATACGCCGGCGGCGTCAAATACCTGTTGCTCTCTGCCCTCCTCTA
CGCCCCCGGTGTGATCCTTTTCGCGAAGGCAAAACTCGAGGCAAAAAAACCGGTGTTCACCCACCTGGAAAACATGATGT
TCGTTGCCGTTCTTATAGGCGCTCTTATAGCGGCGTATGGGCTATATGACGGCTTCCTTACCCTCTAA

Upstream 100 bases:

>100_bases
ATGTATCTTTCGCACACCGACGAACGTTTGATTTATATCAGGCGCATCAAAAATAACATCGTCATACTGCACCTGATATC
CCACTCTGCCGGAGCCATTA

Downstream 100 bases:

>100_bases
AGCCTTGGCGGCTTGATGTTTAAAGGACGATCTCAATGCTCACCGAAAATGTTAAATTCGGCGTCCACTCCGAATGCGGA
AAACTCCGGAAAGTACTGGT

Product: arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MSTPPGKLRLGALVALVVGSMIGGGIFSLPQNMAASAEVGAVLVGWAITAIGMLTLAFVFQTLANRKPDLDGGVYVYAKA
GFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPVFGEGNTVAAVIGASVLLWGVHFLVLRGIQEAAFINLVTTVA
KVVPLILFVLIAVFAFKLDIFTTDIWGLEKPDMGSVMNQVRHMMLVTVWVFIGIEGASIFSARASKRSDVGKATVIGFIT
VLLLLVLVNVLSLGVMTQPELAKLQNPSMAAVLEHIVGPWGAALISVGLIISLLGALLSWVLLCAEIMFAAAKDHTMPEF
LSRENANHVPANALWLTNAMVQVFLVITLFSSSTYLSLIYLATSMILIPYLWSAAYALRLAIGGEGYENARRERRKDLFI
AAVALLYAIWLIYAGGVKYLLLSALLYAPGVILFAKAKLEAKKPVFTHLENMMFVAVLIGALIAAYGLYDGFLTL

Sequences:

>Translated_475_residues
MSTPPGKLRLGALVALVVGSMIGGGIFSLPQNMAASAEVGAVLVGWAITAIGMLTLAFVFQTLANRKPDLDGGVYVYAKA
GFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPVFGEGNTVAAVIGASVLLWGVHFLVLRGIQEAAFINLVTTVA
KVVPLILFVLIAVFAFKLDIFTTDIWGLEKPDMGSVMNQVRHMMLVTVWVFIGIEGASIFSARASKRSDVGKATVIGFIT
VLLLLVLVNVLSLGVMTQPELAKLQNPSMAAVLEHIVGPWGAALISVGLIISLLGALLSWVLLCAEIMFAAAKDHTMPEF
LSRENANHVPANALWLTNAMVQVFLVITLFSSSTYLSLIYLATSMILIPYLWSAAYALRLAIGGEGYENARRERRKDLFI
AAVALLYAIWLIYAGGVKYLLLSALLYAPGVILFAKAKLEAKKPVFTHLENMMFVAVLIGALIAAYGLYDGFLTL
>Mature_474_residues
STPPGKLRLGALVALVVGSMIGGGIFSLPQNMAASAEVGAVLVGWAITAIGMLTLAFVFQTLANRKPDLDGGVYVYAKAG
FGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPVFGEGNTVAAVIGASVLLWGVHFLVLRGIQEAAFINLVTTVAK
VVPLILFVLIAVFAFKLDIFTTDIWGLEKPDMGSVMNQVRHMMLVTVWVFIGIEGASIFSARASKRSDVGKATVIGFITV
LLLLVLVNVLSLGVMTQPELAKLQNPSMAAVLEHIVGPWGAALISVGLIISLLGALLSWVLLCAEIMFAAAKDHTMPEFL
SRENANHVPANALWLTNAMVQVFLVITLFSSSTYLSLIYLATSMILIPYLWSAAYALRLAIGGEGYENARRERRKDLFIA
AVALLYAIWLIYAGGVKYLLLSALLYAPGVILFAKAKLEAKKPVFTHLENMMFVAVLIGALIAAYGLYDGFLTL

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=465, Percent_Identity=46.0215053763441, Blast_Score=399, Evalue=1e-112,
Organism=Escherichia coli, GI2367353, Length=424, Percent_Identity=29.0094339622642, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1790575, Length=386, Percent_Identity=27.2020725388601, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1786908, Length=430, Percent_Identity=23.7209302325581, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004754
- InterPro:   IPR022461 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51200; Mature: 51069

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPPGKLRLGALVALVVGSMIGGGIFSLPQNMAASAEVGAVLVGWAITAIGMLTLAFVF
CCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QTLANRKPDLDGGVYVYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPVF
HHHHCCCCCCCCCEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
GEGNTVAAVIGASVLLWGVHFLVLRGIQEAAFINLVTTVAKVVPLILFVLIAVFAFKLDI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTTDIWGLEKPDMGSVMNQVRHMMLVTVWVFIGIEGASIFSARASKRSDVGKATVIGFIT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
VLLLLVLVNVLSLGVMTQPELAKLQNPSMAAVLEHIVGPWGAALISVGLIISLLGALLSW
HHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
VLLCAEIMFAAAKDHTMPEFLSRENANHVPANALWLTNAMVQVFLVITLFSSSTYLSLIY
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LATSMILIPYLWSAAYALRLAIGGEGYENARRERRKDLFIAAVALLYAIWLIYAGGVKYL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LLSALLYAPGVILFAKAKLEAKKPVFTHLENMMFVAVLIGALIAAYGLYDGFLTL
HHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STPPGKLRLGALVALVVGSMIGGGIFSLPQNMAASAEVGAVLVGWAITAIGMLTLAFVF
CCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2158926; 10984043; 1311296 [H]