| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is str [H]
Identifier: 66045906
GI number: 66045906
Start: 3241417
End: 3242247
Strand: Direct
Name: str [H]
Synonym: Psyr_2670
Alternate gene names: 66045906
Gene position: 3241417-3242247 (Clockwise)
Preceding gene: 66045905
Following gene: 66045908
Centisome position: 53.19
GC content: 56.08
Gene sequence:
>831_bases ATGCCGCCTGTTTTTCCTGCTCATTGGCACGTTTCGCAACCTGTTCTCATTGCGGACACCTTTTCCAGCCTCGTTTGGAA AGTTTCATTGCCAGACGGGACTCCTGCAATCGTCAAGGGATTGAAACCTATAGAAGACATTGCTGATGAACTGCGCGGGG CCGACTATCTGGTATGGCGCAATGGGAGGGGAGCAGTCCGGTTGCTCGGTCGTGAGAACAATCTGATGTTGCTCGAATAT GCCGGGGAGCGAATGCTCTCTCACATCGTTGCCGAGCACGGCGACTACCAGGCGACCGAAATTGCAGCGGAACTAATGGC GAAGCTGTATGCCGCATCTGAGGAACCCCTGCCTTCTGCCCTTCTCCCGATCCGGGATCGCTTTGCAGCTTTGTTTCAGC GGGCGCGCGATGATCAAAACGCAGGTTGTCAAACTGACTACGTCCACGCGGCGATTATAGCCGATCAAATGATGAGCAAT GCCTCGGAACTGCGTGGGCTACATGGCGATCTGCATCATGAAAACATCATGTTCTCCAGTCGCGGCTGGCTGGTGATAGA TCCCGTCGGTCTGGTCGGTGAAGTGGGCTTTGGCGCCGCCAATATGTTCTACGATCCGGCTGACAGAGACGACCTTTGTC TCGATCCTAGACGCATTGCACAGATGGCGGACGCATTCTCTCGTGCGCTGGACGTCGATCCGCGTCGCCTGCTCGACCAG GCGTACGCTTATGGGTGCCTTTCCGCAGCTTGGAACGCGGATGGAGAAGAGGAGCAACGCGATCTAGCTATCGCGGCCGC GATCAAGCAGGTGCGACAGACGTCATACTAG
Upstream 100 bases:
>100_bases CCTTCGCTGTCCTATTCAATGTATTGGGGATCGAAGCCCCCGACCGCGAACGCCTTGCCTTCTATCTGCGATTGGACCCT CTGACTTGGGGTTGATGTTC
Downstream 100 bases:
>100_bases ATATCAAGCGACTTCTCCTATCCCCTGGGAACACATCAATCTTACCGGAGAATATCGTTGGCCAAAGCCTTAGCGTAGGA TTTCGCCCTCTCCCGCAAAC
Product: aminoglycoside/hydroxyurea antibiotic resistance kinase
Products: NA
Alternate protein names: Streptomycin 3''-phosphotransferase; SPH [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEY AGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSN ASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLLDQ AYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY
Sequences:
>Translated_276_residues MPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEY AGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSN ASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLLDQ AYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY >Mature_275_residues PPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYA GERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSNA SELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLLDQA YAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY
Specific function: The aminoglycoside phosphotransferases achieve inactivation of their antibiotic substrates by phosphorylation [H]
COG id: COG3570
COG function: function code V; Streptomycin 6-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aminoglycoside phosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006748 [H]
Pfam domain/function: PF04655 APH_6_hur [H]
EC number: =2.7.1.87 [H]
Molecular weight: Translated: 30546; Mature: 30415
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWR CCCCCCCCCCCCCCEEEHCCHHHHEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCEEEEE NGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSA CCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHH LLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSNASELRGLHGDLHHENIMFSS HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEEEC RGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLLDQ CCCEEECCCHHHHHCCCCHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWR CCCCCCCCCCCCCEEEHCCHHHHEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCEEEEE NGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSA CCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHH LLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSNASELRGLHGDLHHENIMFSS HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEEEC RGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLLDQ CCCEEECCCHHHHHCCCCHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3889831 [H]