| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is nfrA1 [H]
Identifier: 66045891
GI number: 66045891
Start: 3225794
End: 3226615
Strand: Direct
Name: nfrA1 [H]
Synonym: Psyr_2655
Alternate gene names: 66045891
Gene position: 3225794-3226615 (Clockwise)
Preceding gene: 66045890
Following gene: 66045893
Centisome position: 52.94
GC content: 60.58
Gene sequence:
>822_bases ATGACAGTCAACGCACAATCAAAACTGGCTTCCCGCTACGGCGCCGCGGACATCTCACCCCTCATGCCCTGGAACGAGAC GATCGATCAGTTGCTCGACCATCGCAGCGTCCGTGCTTTCATTGATCAGCCACTGCCTGACGGCACCATCGAGACCCTGG TCGCCGCGGCGCAGTCCGCCTCCACCTCTTCAAACCTGCAGTTCTGGAGCGTTGTCGCTGTTCAGGACAGCGATCGGAAA GCGCGCCTCTCGGCACTGGCAGGAAACCAGGCCTACATCGGGCAGGCGCCTCTGTTCTTTGTATGGCTTGCCGACCTGTC TAGGGTCACCCGCGTTGCTGAGCAGCAGGGTGTAGAGCTCGAAGCAGTGCCTTACTTGGAGAGCCTGTTGCTCGGTACGA TTGACGCCGCCTTAGCCGCTCAGAACGCCGTGGTTGCTCTGGAGTCTCTGGGACTTGGGAGCGTGTACATCGGCGCCATC CGAAACGACATTGAAGGCGTGGCCAAGGAGCTTGGTCTGCCTCCGCAGGTCTATCCAGTTTTCGGTCTCTGCGTAGGATA TCCATCTACCGAGCGACCAGCTCAGGTAAAACCACGGCTCCCCCAAGGTGCAGTGCTTCACCGCGAGACCTACTCGGTAG CGGCAGATGTGGAAGCGGTGGCTGTATACGATGAGCGCCTGGGCGCCTTCTACCAGCGTGAGGGCATGACGGCTTCCGGC TGGTCGGAGCAAGTGGTCAATCGGCTTCGCAGTGTCTCGAGCCTGCATGGGCGAGAGGAGCTGGTTGAGGAGCTGAAGCG GATGGGGTTTGGGCTGCGCTGA
Upstream 100 bases:
>100_bases TGTGGGACTGCGTGGGCCCCATGGTATATGAAACTTCGCGCGGGAAGCGTGTAGCACTGCCGGCGATTTGGTAGCCTCGG GCTCTATTTGGAGATCTCGA
Downstream 100 bases:
>100_bases AGACTCATCGCGCCGCTGTCGGGCTGAAAATTGGCTCACCGTTACCTTGGCCCTGTTAAGCGAAGTTCACTAAAGGCACG ACGCTTACATCGTCGCTCAC
Product: nitroreductase
Products: NA
Alternate protein names: NADPH-dependent FMN reductase; NADPH-dependent nitroreductase; NADPH-dependent oxidoreductase [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MTVNAQSKLASRYGAADISPLMPWNETIDQLLDHRSVRAFIDQPLPDGTIETLVAAAQSASTSSNLQFWSVVAVQDSDRK ARLSALAGNQAYIGQAPLFFVWLADLSRVTRVAEQQGVELEAVPYLESLLLGTIDAALAAQNAVVALESLGLGSVYIGAI RNDIEGVAKELGLPPQVYPVFGLCVGYPSTERPAQVKPRLPQGAVLHRETYSVAADVEAVAVYDERLGAFYQREGMTASG WSEQVVNRLRSVSSLHGREELVEELKRMGFGLR
Sequences:
>Translated_273_residues MTVNAQSKLASRYGAADISPLMPWNETIDQLLDHRSVRAFIDQPLPDGTIETLVAAAQSASTSSNLQFWSVVAVQDSDRK ARLSALAGNQAYIGQAPLFFVWLADLSRVTRVAEQQGVELEAVPYLESLLLGTIDAALAAQNAVVALESLGLGSVYIGAI RNDIEGVAKELGLPPQVYPVFGLCVGYPSTERPAQVKPRLPQGAVLHRETYSVAADVEAVAVYDERLGAFYQREGMTASG WSEQVVNRLRSVSSLHGREELVEELKRMGFGLR >Mature_272_residues TVNAQSKLASRYGAADISPLMPWNETIDQLLDHRSVRAFIDQPLPDGTIETLVAAAQSASTSSNLQFWSVVAVQDSDRKA RLSALAGNQAYIGQAPLFFVWLADLSRVTRVAEQQGVELEAVPYLESLLLGTIDAALAAQNAVVALESLGLGSVYIGAIR NDIEGVAKELGLPPQVYPVFGLCVGYPSTERPAQVKPRLPQGAVLHRETYSVAADVEAVAVYDERLGAFYQREGMTASGW SEQVVNRLRSVSSLHGREELVEELKRMGFGLR
Specific function: Reduces FMNH(2) to FMN, with NADPH as reductant. It also reduces nitroaromatic compounds, quinones and azo dyes [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin oxidoreductase frp family [H]
Homologues:
Organism=Escherichia coli, GI1787075, Length=249, Percent_Identity=36.9477911646586, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016446 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.5.1.29 [H]
Molecular weight: Translated: 29599; Mature: 29468
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVNAQSKLASRYGAADISPLMPWNETIDQLLDHRSVRAFIDQPLPDGTIETLVAAAQSA CCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC STSSNLQFWSVVAVQDSDRKARLSALAGNQAYIGQAPLFFVWLADLSRVTRVAEQQGVEL CCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE EAVPYLESLLLGTIDAALAAQNAVVALESLGLGSVYIGAIRNDIEGVAKELGLPPQVYPV EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH FGLCVGYPSTERPAQVKPRLPQGAVLHRETYSVAADVEAVAVYDERLGAFYQREGMTASG HHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCC WSEQVVNRLRSVSSLHGREELVEELKRMGFGLR HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TVNAQSKLASRYGAADISPLMPWNETIDQLLDHRSVRAFIDQPLPDGTIETLVAAAQSA CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC STSSNLQFWSVVAVQDSDRKARLSALAGNQAYIGQAPLFFVWLADLSRVTRVAEQQGVEL CCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE EAVPYLESLLLGTIDAALAAQNAVVALESLGLGSVYIGAIRNDIEGVAKELGLPPQVYPV EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH FGLCVGYPSTERPAQVKPRLPQGAVLHRETYSVAADVEAVAVYDERLGAFYQREGMTASG HHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCC WSEQVVNRLRSVSSLHGREELVEELKRMGFGLR HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 9836433 [H]