Click here to switch to the map view.

The map label for this gene is 66045881

Identifier: 66045881

GI number: 66045881

Start: 3215082

End: 3215459

Strand: Reverse

Name: 66045881

Synonym: Psyr_2645

Alternate gene names: NA

Gene position: 3215459-3215082 (Counterclockwise)

Preceding gene: 66045892

Following gene: 66045879

Centisome position: 52.77

GC content: 54.5

Gene sequence:

>378_bases
ATGCCGCCTCAAGGAAGTTTCGTTACCATCCACGCCAGGCCGCCCCACACAGGTACGTTTAGTTTGTCAGCAAAAGCGCT
TACCGTTCGCGAGGCCTACCAAGTGCTTCGCGACATCGGCTTGGGCGTTAGCGTCATGCGCCGTTTGGGTGAGAAACCGT
GGACTGAAATGTACAGTGGCATGACGAGCGTCGAAACCGATGGCTGGGTCATCACGTTCTACAACGATTGCGAAACTCTG
GATTACTGCGATAGCTGCTATTGCCCAGACGGTCGTGCGTACACCTTCGACTCATCGCAGCAGTTTGGTACTGATCCGGT
TGAGCTGTTGAGCACATGGGAGCACGCGGAGTTGGAAAAGCTGCTAAAGGTCTCATAG

Upstream 100 bases:

>100_bases
CCATTGAGCCTCAATCCCGCCAGGCCTTCGTCGATCGGGCTTGGATGTCATTCGAGATGACCGGATAGAGAGCGAGGCTG
CCAAGCGCCCGTGGCGCGGC

Downstream 100 bases:

>100_bases
CGAAAACTTGCGCCACAGCCGTAGCATCTTTGAGCAGAACCATGATGCAGAGGCATCGTCAGAGGCTGGGAAGGGAGACT
TACGGCGTGAGATATGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MPPQGSFVTIHARPPHTGTFSLSAKALTVREAYQVLRDIGLGVSVMRRLGEKPWTEMYSGMTSVETDGWVITFYNDCETL
DYCDSCYCPDGRAYTFDSSQQFGTDPVELLSTWEHAELEKLLKVS

Sequences:

>Translated_125_residues
MPPQGSFVTIHARPPHTGTFSLSAKALTVREAYQVLRDIGLGVSVMRRLGEKPWTEMYSGMTSVETDGWVITFYNDCETL
DYCDSCYCPDGRAYTFDSSQQFGTDPVELLSTWEHAELEKLLKVS
>Mature_124_residues
PPQGSFVTIHARPPHTGTFSLSAKALTVREAYQVLRDIGLGVSVMRRLGEKPWTEMYSGMTSVETDGWVITFYNDCETLD
YCDSCYCPDGRAYTFDSSQQFGTDPVELLSTWEHAELEKLLKVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14067; Mature: 13936

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPQGSFVTIHARPPHTGTFSLSAKALTVREAYQVLRDIGLGVSVMRRLGEKPWTEMYSG
CCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCC
MTSVETDGWVITFYNDCETLDYCDSCYCPDGRAYTFDSSQQFGTDPVELLSTWEHAELEK
CCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCHHHHHH
LLKVS
HHCCC
>Mature Secondary Structure 
PPQGSFVTIHARPPHTGTFSLSAKALTVREAYQVLRDIGLGVSVMRRLGEKPWTEMYSG
CCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCC
MTSVETDGWVITFYNDCETLDYCDSCYCPDGRAYTFDSSQQFGTDPVELLSTWEHAELEK
CCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCHHHHHH
LLKVS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA