Click here to switch to the map view.

The map label for this gene is 66045879

Identifier: 66045879

GI number: 66045879

Start: 3210976

End: 3212205

Strand: Reverse

Name: 66045879

Synonym: Psyr_2643

Alternate gene names: NA

Gene position: 3212205-3210976 (Counterclockwise)

Preceding gene: 66045881

Following gene: 66045878

Centisome position: 52.71

GC content: 53.09

Gene sequence:

>1230_bases
ATGAATAGGGCTCAGCTGATAAACTTTGAGGCGCTAGAGTTTTTGCTGCAACCAGCTATATCCGAAGGGCAGCATCGGAG
CCTCCCTGCAATCGCGCTTCGAGTTGATGGTAAAGGCATGACTGTCAATGAAGGGCGAGCTGCAGTGATGCGCCTGGCCA
CTGCAATTGCCTGGCGTGAGGGTGCGAAAGTAGAGATCGTCATGTGGGGTGGTGGTAGCCATCCACATCGAGTAGGCATG
CTTCGCAACAATGCCTTTACCGAGTTTTTTTCTGACGAGAATCTCCACTCCCCTCAAAGCGATGAAGCCCGCAAAGCAAT
GGCCTACTATCGCGAAGGGCTGTCACTCAGCAATCCCTTCTACTCGTTTCTCGGATTCTACAAAGCGTTTGCCCGCTCTT
TACCTATTGGCCGAGAACGAGGGCCGTGGATCCAGCAAGCCCTCCCGGTATTAACGGACAGAGACTCAATTGCCCGTCGT
GATGAGTTGCAGGCTCTTGCCACCGACATTTCCAACTACCTAGCAACACAAGGCCGCCATGCTATCGCCCATGCCGAACG
CGACGATATCGTAGATCCTGATGACCCGGATGATCACCAGCGAATTCACATGGACAAGCCACTGATGAGACATCTTGCTG
AGCTCGCTATGGAGGAGCGTCTTGAGGTGCCAGCACGATGGGAATTTGAACGGGAGCACCTGTATGAGCTCGAAGGATTT
CGTACTCTGTTTGACCAGGAGCAGTTGGACAGCCTGAAGCGGGGTGAGCTCGCTCCGAACCGGCAATGCGAAATTCCTGA
TGAGTTTTACGTACTCGCACGCAAAGGAAAGTCATGCGCTCCCCTTGGAAATATGCGCCTTGTATCCGCTGGCATGGATG
ACGGGAAGGTAGGTGTTTGTCTGGAGTCGGCCAACGGTCGAGTGGCGTTTATTTTCTGGATGGATTTCAGAAACGAGCGT
CTCCTAATAGATCCTCTAGCGGGCTGTGGCTTACTAAATGAGCGGCGTGATAGCAGAAGTGACATACAGTCGGAGCTGTC
TCTGCAGGAGTTTAAATTCGCCTTGTACTGCAATGCGTCGGTGGAAATCTGGGCTTCAAACCTGCAGCAGCGCTTGGGTA
AATCAGAGCCTTTCATACTAGAGAATGCCATGCCAGACTTGGCGGGCCACCGGCGGATCATAGACGAGCTCAAAGCCATC
TTGGAGAGAATGCCCCCTGAAGAGGGCTAA

Upstream 100 bases:

>100_bases
CCCACTGCCCTGGGCCCATCTTGATCGCACTTCAGCGAATCGCCCACCATCGCGATCTGGTCATGCTGATCGCCGAACAG
GTGCCCAGGCGTCACCTGTA

Downstream 100 bases:

>100_bases
CGTTCCGTGGAAGCGGCAAAGCTAAGCCTCTCTTGTCGGATGGGCTATCAAGGTCGTCAAGATTGGTGAAAAAAACCTTA
AAGTCGTAGTCAACCCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MNRAQLINFEALEFLLQPAISEGQHRSLPAIALRVDGKGMTVNEGRAAVMRLATAIAWREGAKVEIVMWGGGSHPHRVGM
LRNNAFTEFFSDENLHSPQSDEARKAMAYYREGLSLSNPFYSFLGFYKAFARSLPIGRERGPWIQQALPVLTDRDSIARR
DELQALATDISNYLATQGRHAIAHAERDDIVDPDDPDDHQRIHMDKPLMRHLAELAMEERLEVPARWEFEREHLYELEGF
RTLFDQEQLDSLKRGELAPNRQCEIPDEFYVLARKGKSCAPLGNMRLVSAGMDDGKVGVCLESANGRVAFIFWMDFRNER
LLIDPLAGCGLLNERRDSRSDIQSELSLQEFKFALYCNASVEIWASNLQQRLGKSEPFILENAMPDLAGHRRIIDELKAI
LERMPPEEG

Sequences:

>Translated_409_residues
MNRAQLINFEALEFLLQPAISEGQHRSLPAIALRVDGKGMTVNEGRAAVMRLATAIAWREGAKVEIVMWGGGSHPHRVGM
LRNNAFTEFFSDENLHSPQSDEARKAMAYYREGLSLSNPFYSFLGFYKAFARSLPIGRERGPWIQQALPVLTDRDSIARR
DELQALATDISNYLATQGRHAIAHAERDDIVDPDDPDDHQRIHMDKPLMRHLAELAMEERLEVPARWEFEREHLYELEGF
RTLFDQEQLDSLKRGELAPNRQCEIPDEFYVLARKGKSCAPLGNMRLVSAGMDDGKVGVCLESANGRVAFIFWMDFRNER
LLIDPLAGCGLLNERRDSRSDIQSELSLQEFKFALYCNASVEIWASNLQQRLGKSEPFILENAMPDLAGHRRIIDELKAI
LERMPPEEG
>Mature_409_residues
MNRAQLINFEALEFLLQPAISEGQHRSLPAIALRVDGKGMTVNEGRAAVMRLATAIAWREGAKVEIVMWGGGSHPHRVGM
LRNNAFTEFFSDENLHSPQSDEARKAMAYYREGLSLSNPFYSFLGFYKAFARSLPIGRERGPWIQQALPVLTDRDSIARR
DELQALATDISNYLATQGRHAIAHAERDDIVDPDDPDDHQRIHMDKPLMRHLAELAMEERLEVPARWEFEREHLYELEGF
RTLFDQEQLDSLKRGELAPNRQCEIPDEFYVLARKGKSCAPLGNMRLVSAGMDDGKVGVCLESANGRVAFIFWMDFRNER
LLIDPLAGCGLLNERRDSRSDIQSELSLQEFKFALYCNASVEIWASNLQQRLGKSEPFILENAMPDLAGHRRIIDELKAI
LERMPPEEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46522; Mature: 46522

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRAQLINFEALEFLLQPAISEGQHRSLPAIALRVDGKGMTVNEGRAAVMRLATAIAWRE
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHCC
GAKVEIVMWGGGSHPHRVGMLRNNAFTEFFSDENLHSPQSDEARKAMAYYREGLSLSNPF
CCEEEEEEECCCCCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
YSFLGFYKAFARSLPIGRERGPWIQQALPVLTDRDSIARRDELQALATDISNYLATQGRH
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
AIAHAERDDIVDPDDPDDHQRIHMDKPLMRHLAELAMEERLEVPARWEFEREHLYELEGF
HHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
RTLFDQEQLDSLKRGELAPNRQCEIPDEFYVLARKGKSCAPLGNMRLVSAGMDDGKVGVC
HHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCEEEECCCCCCCEEEE
LESANGRVAFIFWMDFRNERLLIDPLAGCGLLNERRDSRSDIQSELSLQEFKFALYCNAS
EECCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHEEEEEEECCC
VEIWASNLQQRLGKSEPFILENAMPDLAGHRRIIDELKAILERMPPEEG
HHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRAQLINFEALEFLLQPAISEGQHRSLPAIALRVDGKGMTVNEGRAAVMRLATAIAWRE
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHCC
GAKVEIVMWGGGSHPHRVGMLRNNAFTEFFSDENLHSPQSDEARKAMAYYREGLSLSNPF
CCEEEEEEECCCCCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
YSFLGFYKAFARSLPIGRERGPWIQQALPVLTDRDSIARRDELQALATDISNYLATQGRH
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
AIAHAERDDIVDPDDPDDHQRIHMDKPLMRHLAELAMEERLEVPARWEFEREHLYELEGF
HHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
RTLFDQEQLDSLKRGELAPNRQCEIPDEFYVLARKGKSCAPLGNMRLVSAGMDDGKVGVC
HHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCEEEECCCCCCCEEEE
LESANGRVAFIFWMDFRNERLLIDPLAGCGLLNERRDSRSDIQSELSLQEFKFALYCNAS
EECCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHEEEEEEECCC
VEIWASNLQQRLGKSEPFILENAMPDLAGHRRIIDELKAILERMPPEEG
HHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA