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The map label for this gene is rhbA [H]

Identifier: 66045855

GI number: 66045855

Start: 3175740

End: 3177074

Strand: Reverse

Name: rhbA [H]

Synonym: Psyr_2619

Alternate gene names: 66045855

Gene position: 3177074-3175740 (Counterclockwise)

Preceding gene: 66045859

Following gene: 66045847

Centisome position: 52.14

GC content: 60.97

Gene sequence:

>1335_bases
ATGGAAGAGTTAAGCAATCTCAAGAAACTGGAGTCGAATGCGCGCACCTACGCAGCGACCTTCCAGCAGCTGTTTGTCAG
CGGCAGAGGCATGCGAGTCAAGGACGCCAACGGCCAGGAATACCTTGACTGCCTGTCCAACGCTGGCACGCTTGCATTGG
GTCATAACCCACCGGTGGTCCGTGAAGCGGTGATCGAATTTCTGAACAGTGATCATCTGCAGCAGGCCCTTGACCTGGCC
ACACCGGCCAAGCACGCCTTCGTCGAAGAACTGTTCGCAACGTTGCCTGCCAGCATGCGTGACAACAGCAAAATCCTGTT
CTGCGGCCCCAGCGGCTCAGACGCGGTCGAAGCCGCAATCAAACTGGCCCGTCATTACACCCAGCGCTCGCCGCTGATGT
CTTTCCACGGGGGTTATCACGGCATGACCGCTGGTGCGTTGTCGGCCATGGGCAACCTCAACCCCAAGGCAGGCCTGCTG
GCCCAGGGCACCCACTTCCTGCCCTTCCCCTATCGCTTCCGCTGCCCGTTCGGCACCGATGGTGAACATACTGACCGCCT
CTCCATCGAGTACATCCGCACTGTACTCAGTGACCCGGAAAGCGGTGTGCCCAAACCGGCTGCGGTGGTGGTCGAAGTGA
TCCAGGGCGAAGGCGGCTGCATCGCAGCATCGGCAGAGTGGCTGCGCGCCGTGCGGGAGATCACCCATGAGCTCGGGATC
TTGCTGATTATCGACGAAGTGCAAACCGGCCTCGGACGTACCGGCAACCTGTTTGCCATCGAACACTCCGGGATAACGCC
GGATATTCTGGTGCTGTCCAAGGCCATCGGTGGCGGTTACCCGATATCAGTGATCGTCTATGCCGAGCACCTGGATACAT
GGGGCCCTGGCATGCACGCAGGTACCTTCCGTGGCAACCAGGTGGCAATGGTGGCCGGGGCTGCGACCATGCGTCATATC
AAGGAGCACGATCTGGTCGGCAATGCCACGCGCCGGGGTGAGCAGTTGCACAGCGGGCTGGAGGACATCGCCCGGCAGTT
TCCGTTTATCGGCGATGTTCGTGGTCGTGGCCTGATGCTCGGTGTGGAAATCGTCAAGCCGACCAACGGGTCACGTCCGG
GGGCTGGCGATGGCGCGCGGGCGCGGGCGATCAAGCTGGAGTGCTTCAACAACGGCATGATCATCGAGACCGGTGGACGC
AACAGTGCAGTCCTGCGCTTCCTGCCACCGTTGAACATTACCGAGTCGGAAGTGGGCATGATCCTCGACCGCTTCGAACA
GTCCCTCAAGAGCAGTAGCGCGGCTCGGGTTTCCAGTGTCAGCGCGGTAGGCTGA

Upstream 100 bases:

>100_bases
ACGGCGATAAGTTGGCGATCACCCTGAGGTTCTTACAGAATCGGGCTCTGCTCGAAGCGAGTATCAATGAATCCGTACCT
GTGCCACCAAGGGATCGACT

Downstream 100 bases:

>100_bases
GTCCTCGCAACAGCTTGCCAGAGAGGCTGGCGCAGACGACAGCTACCCGTCGACTGCGCCAGTCTCGCGAGCAGCATTCC
CCCCTTTGGCTTCCTGCCTG

Product: diaminobutyrate-2-oxoglutarate transaminase

Products: NA

Alternate protein names: Diaminobutyrate transaminase; L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase; DABA aminotransferase; DABA-AT; L-diaminobutyric acid transaminase [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MEELSNLKKLESNARTYAATFQQLFVSGRGMRVKDANGQEYLDCLSNAGTLALGHNPPVVREAVIEFLNSDHLQQALDLA
TPAKHAFVEELFATLPASMRDNSKILFCGPSGSDAVEAAIKLARHYTQRSPLMSFHGGYHGMTAGALSAMGNLNPKAGLL
AQGTHFLPFPYRFRCPFGTDGEHTDRLSIEYIRTVLSDPESGVPKPAAVVVEVIQGEGGCIAASAEWLRAVREITHELGI
LLIIDEVQTGLGRTGNLFAIEHSGITPDILVLSKAIGGGYPISVIVYAEHLDTWGPGMHAGTFRGNQVAMVAGAATMRHI
KEHDLVGNATRRGEQLHSGLEDIARQFPFIGDVRGRGLMLGVEIVKPTNGSRPGAGDGARARAIKLECFNNGMIIETGGR
NSAVLRFLPPLNITESEVGMILDRFEQSLKSSSAARVSSVSAVG

Sequences:

>Translated_444_residues
MEELSNLKKLESNARTYAATFQQLFVSGRGMRVKDANGQEYLDCLSNAGTLALGHNPPVVREAVIEFLNSDHLQQALDLA
TPAKHAFVEELFATLPASMRDNSKILFCGPSGSDAVEAAIKLARHYTQRSPLMSFHGGYHGMTAGALSAMGNLNPKAGLL
AQGTHFLPFPYRFRCPFGTDGEHTDRLSIEYIRTVLSDPESGVPKPAAVVVEVIQGEGGCIAASAEWLRAVREITHELGI
LLIIDEVQTGLGRTGNLFAIEHSGITPDILVLSKAIGGGYPISVIVYAEHLDTWGPGMHAGTFRGNQVAMVAGAATMRHI
KEHDLVGNATRRGEQLHSGLEDIARQFPFIGDVRGRGLMLGVEIVKPTNGSRPGAGDGARARAIKLECFNNGMIIETGGR
NSAVLRFLPPLNITESEVGMILDRFEQSLKSSSAARVSSVSAVG
>Mature_444_residues
MEELSNLKKLESNARTYAATFQQLFVSGRGMRVKDANGQEYLDCLSNAGTLALGHNPPVVREAVIEFLNSDHLQQALDLA
TPAKHAFVEELFATLPASMRDNSKILFCGPSGSDAVEAAIKLARHYTQRSPLMSFHGGYHGMTAGALSAMGNLNPKAGLL
AQGTHFLPFPYRFRCPFGTDGEHTDRLSIEYIRTVLSDPESGVPKPAAVVVEVIQGEGGCIAASAEWLRAVREITHELGI
LLIIDEVQTGLGRTGNLFAIEHSGITPDILVLSKAIGGGYPISVIVYAEHLDTWGPGMHAGTFRGNQVAMVAGAATMRHI
KEHDLVGNATRRGEQLHSGLEDIARQFPFIGDVRGRGLMLGVEIVKPTNGSRPGAGDGARARAIKLECFNNGMIIETGGR
NSAVLRFLPPLNITESEVGMILDRFEQSLKSSSAARVSSVSAVG

Specific function: Unknown

COG id: COG0160

COG function: function code E; 4-aminobutyrate aminotransferase and related aminotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI13994255, Length=444, Percent_Identity=29.7297297297297, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI37574042, Length=408, Percent_Identity=28.1862745098039, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI226442705, Length=408, Percent_Identity=28.1862745098039, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI24119277, Length=447, Percent_Identity=25.9507829977629, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI226442709, Length=391, Percent_Identity=27.6214833759591, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI4557809, Length=404, Percent_Identity=26.980198019802, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI188536080, Length=457, Percent_Identity=25.382932166302, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI38679950, Length=457, Percent_Identity=25.382932166302, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI38679946, Length=457, Percent_Identity=25.382932166302, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI284507298, Length=318, Percent_Identity=28.3018867924528, Blast_Score=110, Evalue=3e-24,
Organism=Escherichia coli, GI145693181, Length=415, Percent_Identity=33.7349397590361, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI1789016, Length=409, Percent_Identity=34.718826405868, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1788044, Length=410, Percent_Identity=31.7073170731707, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1787560, Length=414, Percent_Identity=33.0917874396135, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1789759, Length=418, Percent_Identity=31.1004784688995, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1786991, Length=359, Percent_Identity=32.033426183844, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1786349, Length=332, Percent_Identity=30.1204819277108, Blast_Score=120, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI32564660, Length=456, Percent_Identity=30.0438596491228, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI71992977, Length=412, Percent_Identity=28.1553398058252, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI25144271, Length=408, Percent_Identity=26.9607843137255, Blast_Score=128, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI25144274, Length=219, Percent_Identity=32.8767123287671, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17541228, Length=464, Percent_Identity=24.7844827586207, Blast_Score=100, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6324432, Length=426, Percent_Identity=29.5774647887324, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6323470, Length=434, Percent_Identity=28.110599078341, Blast_Score=141, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6321456, Length=416, Percent_Identity=26.6826923076923, Blast_Score=96, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6324386, Length=400, Percent_Identity=25, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI161085790, Length=437, Percent_Identity=29.0617848970252, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI28574759, Length=430, Percent_Identity=29.3023255813954, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI21356575, Length=430, Percent_Identity=26.5116279069767, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI21357415, Length=419, Percent_Identity=26.7303102625298, Blast_Score=131, Evalue=9e-31,
Organism=Drosophila melanogaster, GI281366494, Length=461, Percent_Identity=26.6811279826464, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24667139, Length=461, Percent_Identity=26.6811279826464, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24667143, Length=461, Percent_Identity=26.6811279826464, Blast_Score=112, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR004637
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =2.6.1.76 [H]

Molecular weight: Translated: 47576; Mature: 47576

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELSNLKKLESNARTYAATFQQLFVSGRGMRVKDANGQEYLDCLSNAGTLALGHNPPVV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCEEEECCCCCHH
REAVIEFLNSDHLQQALDLATPAKHAFVEELFATLPASMRDNSKILFCGPSGSDAVEAAI
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHH
KLARHYTQRSPLMSFHGGYHGMTAGALSAMGNLNPKAGLLAQGTHFLPFPYRFRCPFGTD
HHHHHHHHCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCCCC
GEHTDRLSIEYIRTVLSDPESGVPKPAAVVVEVIQGEGGCIAASAEWLRAVREITHELGI
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCE
LLIIDEVQTGLGRTGNLFAIEHSGITPDILVLSKAIGGGYPISVIVYAEHLDTWGPGMHA
EEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCC
GTFRGNQVAMVAGAATMRHIKEHDLVGNATRRGEQLHSGLEDIARQFPFIGDVRGRGLML
CCCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEE
GVEIVKPTNGSRPGAGDGARARAIKLECFNNGMIIETGGRNSAVLRFLPPLNITESEVGM
EEEEECCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCHHHHHH
ILDRFEQSLKSSSAARVSSVSAVG
HHHHHHHHHHHCCHHHHHHHCCCC
>Mature Secondary Structure
MEELSNLKKLESNARTYAATFQQLFVSGRGMRVKDANGQEYLDCLSNAGTLALGHNPPVV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCEEEECCCCCHH
REAVIEFLNSDHLQQALDLATPAKHAFVEELFATLPASMRDNSKILFCGPSGSDAVEAAI
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHH
KLARHYTQRSPLMSFHGGYHGMTAGALSAMGNLNPKAGLLAQGTHFLPFPYRFRCPFGTD
HHHHHHHHCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCCCC
GEHTDRLSIEYIRTVLSDPESGVPKPAAVVVEVIQGEGGCIAASAEWLRAVREITHELGI
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCE
LLIIDEVQTGLGRTGNLFAIEHSGITPDILVLSKAIGGGYPISVIVYAEHLDTWGPGMHA
EEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCC
GTFRGNQVAMVAGAATMRHIKEHDLVGNATRRGEQLHSGLEDIARQFPFIGDVRGRGLML
CCCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEE
GVEIVKPTNGSRPGAGDGARARAIKLECFNNGMIIETGGRNSAVLRFLPPLNITESEVGM
EEEEECCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCHHHHHH
ILDRFEQSLKSSSAARVSSVSAVG
HHHHHHHHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]