| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is dhbF [H]
Identifier: 66045847
GI number: 66045847
Start: 3093701
End: 3095545
Strand: Reverse
Name: dhbF [H]
Synonym: Psyr_2611
Alternate gene names: 66045847
Gene position: 3095545-3093701 (Counterclockwise)
Preceding gene: 66045855
Following gene: 66045846
Centisome position: 50.8
GC content: 62.06
Gene sequence:
>1845_bases ATGCCGATTACGAACACTGACGAATCGCTTAGCGCCGCGTCAGCCCCTCTCAAGCCCGGTGCTTTCCTGCACGAGATATT CAGTGACAGGGCGCGTCAATTTCCTGAGCGCACCGCGGTGAGCGATGCAGCCCGGACGTTGAGCTACGCACAGCTCGACG CGCTGTCGACAAAGCTGGCTGCACGTTTACGCGATGAAGGCGTGACCTACGGCACGCGTGTGGGCATGTACCTGCCGCGC AGCGTCGATCTGGTCACCAGCCTGCTGGGTATTCTCAAAGCCGGCGGCACCTATGTGCCGGTCGACCCGCAATACCCTGG CAAACGCGTCGAGCACATCGTGCGCGACAGCGAGCTGAGCCTGATCATCGGCGATGCCGCCAACCTGCCGAAAATATCGT CTCTGCGCGTATTGGCACTCGACGAGTTACTGTCCGCGCCGGCGCTGCAACCGGCCGCTCAAGACACCCGTATCGACCCG AATAATTCCACTGCCTACATCATCTACACCTCTGGCTCCACCGGTGAGCCCAAGGGCGTACAGGTTTCCCATGGCAACGT CAGTCGCCTGCTGGAAAGTACCCAACGCGCCTATGGCTTCAACGCCCAGGATGTCTGGTCGATGTTCCACTCCATCGGTT TCGACTTCTCGGTCTGGGAAATCTGGGGTGCCCTCGCCCACGGCGGCCAGGTGGCCGTTGTCCCGTATGACATCTCGCGC TCTCCTGCCGCCCTGCGTCAATGGCTCGCCGATCAGCGCATCACCGTGCTCAGCCAGACGCCATCGGCTTTCCGTGGTCT TGATGAGGCCGATCGTGGCAACACCGCGCCGCTGGCGCTGCGCTACGTGGTGCTCGGTGGCGAAGCGTTGCCCGCCAGCG TGCTGCGTCCCTGGGTCGAGCGCCACGGTGACCAGAAGCCCGCGCTGATCAACATGTACGGCATCACTGAGGCCACCGTT CACACCACCTTCAAGCGAGTGTTGGCGCAGGACCTGGAAACAGCAGCCATGGTGTCGCTGGGCAAGCCGCTGCACGGCTG GCGCCTGCACCTGCTTGACGCCAACCAGGCGCCGGTCGCGGCAGGCACTACCGGCGAGCTGTACATCGAAGGCGCGGGCG TGGCTCAGGGCTACCTGAACCGTGAGGCGCTCAACGTCGAGCGCTTCGTCGAGTTACCCGGTGCTGTGCGCGCCTATCGT ACTGGCGACCTGATGACCCTGGAGAGTAATGGCGAATACCGTTATGCCGGTCGCTGCGACGAGCAATTGAAAATCAGCGG TTTCCGCATCGAGCCCGGCGAGATCGAAGCCTCTCTGCAAACCAGCCCGAGCGTGGCCGCGGCCCATGTCGGCGTACATG ATTACGGCGATGGTGACCTGCGCCTGGTAGCTTACGTGGTGCCAGGCCAGGGCGTCGACGCCTGGACCGAACAGGCTCGC AGCGAAGTTGCCGCATTGATGGCCGAAAATTTGCCGGAGTACATGCGTCCCTCGGTGTATGTGCCGCTGGCAGAGCTGCC GGTGACTCATCACGGCAAAATCGACAAGCAACAACTGCCCTCGCCTGCCGCTGGCACGGCGCTTTCAGGCGCGGCAGACG TCAAGGGCCTCAGTGAACAGGAGCACTTCGTGCTCAAGGTCTGGAGCGAAGACCTGGGTCTGAAAAACATCGGCGTCAAT GATGATTTCTTCGATTCCGGCGGCACTTCACTGGCACTGATCCGCTCGCTGAGCAAGCTCAAGACACATTACAAAATCAA CCTCGACCCCGGGATCCTGGCGGATGGCGCAACGGCCAAAGTCCTGGCCGACCACATCACCCGTAGCCTTGTTCAAGCCC ATTGA
Upstream 100 bases:
>100_bases GGATCATGCCGGCCCATTGACGGATTCGTCAGGCCGCAGGGATGTCTCGATTGCAGCGGATTTGAGCGCTGCATCTGGTT ATTACACAGGAGCTTTGGTC
Downstream 100 bases:
>100_bases CCGAAAAGGAAAAGCTCATGAGCAAAAAATTCGCCTTAACTGCGGAACAGCGTGCCTCGTTCGAGAAAAACGGTTTTATC GGGCCGTTTGACGCTTACTC
Product: amino acid adenylation
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MPITNTDESLSAASAPLKPGAFLHEIFSDRARQFPERTAVSDAARTLSYAQLDALSTKLAARLRDEGVTYGTRVGMYLPR SVDLVTSLLGILKAGGTYVPVDPQYPGKRVEHIVRDSELSLIIGDAANLPKISSLRVLALDELLSAPALQPAAQDTRIDP NNSTAYIIYTSGSTGEPKGVQVSHGNVSRLLESTQRAYGFNAQDVWSMFHSIGFDFSVWEIWGALAHGGQVAVVPYDISR SPAALRQWLADQRITVLSQTPSAFRGLDEADRGNTAPLALRYVVLGGEALPASVLRPWVERHGDQKPALINMYGITEATV HTTFKRVLAQDLETAAMVSLGKPLHGWRLHLLDANQAPVAAGTTGELYIEGAGVAQGYLNREALNVERFVELPGAVRAYR TGDLMTLESNGEYRYAGRCDEQLKISGFRIEPGEIEASLQTSPSVAAAHVGVHDYGDGDLRLVAYVVPGQGVDAWTEQAR SEVAALMAENLPEYMRPSVYVPLAELPVTHHGKIDKQQLPSPAAGTALSGAADVKGLSEQEHFVLKVWSEDLGLKNIGVN DDFFDSGGTSLALIRSLSKLKTHYKINLDPGILADGATAKVLADHITRSLVQAH
Sequences:
>Translated_614_residues MPITNTDESLSAASAPLKPGAFLHEIFSDRARQFPERTAVSDAARTLSYAQLDALSTKLAARLRDEGVTYGTRVGMYLPR SVDLVTSLLGILKAGGTYVPVDPQYPGKRVEHIVRDSELSLIIGDAANLPKISSLRVLALDELLSAPALQPAAQDTRIDP NNSTAYIIYTSGSTGEPKGVQVSHGNVSRLLESTQRAYGFNAQDVWSMFHSIGFDFSVWEIWGALAHGGQVAVVPYDISR SPAALRQWLADQRITVLSQTPSAFRGLDEADRGNTAPLALRYVVLGGEALPASVLRPWVERHGDQKPALINMYGITEATV HTTFKRVLAQDLETAAMVSLGKPLHGWRLHLLDANQAPVAAGTTGELYIEGAGVAQGYLNREALNVERFVELPGAVRAYR TGDLMTLESNGEYRYAGRCDEQLKISGFRIEPGEIEASLQTSPSVAAAHVGVHDYGDGDLRLVAYVVPGQGVDAWTEQAR SEVAALMAENLPEYMRPSVYVPLAELPVTHHGKIDKQQLPSPAAGTALSGAADVKGLSEQEHFVLKVWSEDLGLKNIGVN DDFFDSGGTSLALIRSLSKLKTHYKINLDPGILADGATAKVLADHITRSLVQAH >Mature_613_residues PITNTDESLSAASAPLKPGAFLHEIFSDRARQFPERTAVSDAARTLSYAQLDALSTKLAARLRDEGVTYGTRVGMYLPRS VDLVTSLLGILKAGGTYVPVDPQYPGKRVEHIVRDSELSLIIGDAANLPKISSLRVLALDELLSAPALQPAAQDTRIDPN NSTAYIIYTSGSTGEPKGVQVSHGNVSRLLESTQRAYGFNAQDVWSMFHSIGFDFSVWEIWGALAHGGQVAVVPYDISRS PAALRQWLADQRITVLSQTPSAFRGLDEADRGNTAPLALRYVVLGGEALPASVLRPWVERHGDQKPALINMYGITEATVH TTFKRVLAQDLETAAMVSLGKPLHGWRLHLLDANQAPVAAGTTGELYIEGAGVAQGYLNREALNVERFVELPGAVRAYRT GDLMTLESNGEYRYAGRCDEQLKISGFRIEPGEIEASLQTSPSVAAAHVGVHDYGDGDLRLVAYVVPGQGVDAWTEQARS EVAALMAENLPEYMRPSVYVPLAELPVTHHGKIDKQQLPSPAAGTALSGAADVKGLSEQEHFVLKVWSEDLGLKNIGVND DFFDSGGTSLALIRSLSKLKTHYKINLDPGILADGATAKVLADHITRSLVQAH
Specific function: Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI45580730, Length=603, Percent_Identity=26.3681592039801, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI187761345, Length=545, Percent_Identity=26.4220183486239, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI187761343, Length=545, Percent_Identity=26.4220183486239, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI122937307, Length=505, Percent_Identity=24.7524752475248, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI38505220, Length=512, Percent_Identity=22.8515625, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI195947378, Length=414, Percent_Identity=23.4299516908213, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI58082049, Length=488, Percent_Identity=23.3606557377049, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1786801, Length=601, Percent_Identity=33.4442595673877, Blast_Score=259, Evalue=4e-70, Organism=Escherichia coli, GI145693145, Length=537, Percent_Identity=25.8845437616387, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI1790505, Length=546, Percent_Identity=23.8095238095238, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1786529, Length=536, Percent_Identity=24.8134328358209, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1789201, Length=389, Percent_Identity=26.7352185089974, Blast_Score=70, Evalue=4e-13, Organism=Caenorhabditis elegans, GI32563687, Length=500, Percent_Identity=23.2, Blast_Score=118, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17556356, Length=535, Percent_Identity=24.8598130841122, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17558820, Length=505, Percent_Identity=23.3663366336634, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17531443, Length=503, Percent_Identity=22.8628230616302, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI32564422, Length=399, Percent_Identity=24.5614035087719, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI32564420, Length=399, Percent_Identity=24.5614035087719, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17538037, Length=548, Percent_Identity=23.1751824817518, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994703, Length=562, Percent_Identity=22.9537366548043, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71994690, Length=568, Percent_Identity=22.7112676056338, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71994694, Length=562, Percent_Identity=22.9537366548043, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560308, Length=530, Percent_Identity=22.0754716981132, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71982997, Length=564, Percent_Identity=24.468085106383, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71983001, Length=564, Percent_Identity=24.468085106383, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319591, Length=688, Percent_Identity=26.1627906976744, Blast_Score=184, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6319264, Length=524, Percent_Identity=23.2824427480916, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323182, Length=546, Percent_Identity=22.5274725274725, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648676, Length=535, Percent_Identity=30.8411214953271, Blast_Score=195, Evalue=8e-50, Organism=Drosophila melanogaster, GI24581924, Length=520, Percent_Identity=27.1153846153846, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24582852, Length=368, Percent_Identity=25.5434782608696, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI18859661, Length=551, Percent_Identity=25.0453720508167, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI62472339, Length=557, Percent_Identity=21.903052064632, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24667955, Length=549, Percent_Identity=21.6757741347905, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI21355225, Length=533, Percent_Identity=22.5140712945591, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI24667959, Length=385, Percent_Identity=23.8961038961039, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 66239; Mature: 66107
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS50075 ACP_DOMAIN ; PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITNTDESLSAASAPLKPGAFLHEIFSDRARQFPERTAVSDAARTLSYAQLDALSTKLA CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ARLRDEGVTYGTRVGMYLPRSVDLVTSLLGILKAGGTYVPVDPQYPGKRVEHIVRDSELS HHHHHCCCCEEEEECEECCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCEE LIIGDAANLPKISSLRVLALDELLSAPALQPAAQDTRIDPNNSTAYIIYTSGSTGEPKGV EEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCE QVSHGNVSRLLESTQRAYGFNAQDVWSMFHSIGFDFSVWEIWGALAHGGQVAVVPYDISR EECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCC SPAALRQWLADQRITVLSQTPSAFRGLDEADRGNTAPLALRYVVLGGEALPASVLRPWVE CHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH RHGDQKPALINMYGITEATVHTTFKRVLAQDLETAAMVSLGKPLHGWRLHLLDANQAPVA HCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEE AGTTGELYIEGAGVAQGYLNREALNVERFVELPGAVRAYRTGDLMTLESNGEYRYAGRCD CCCCCEEEEECCCHHHHHHCHHHHCHHHHHHCCCHHEEEECCCEEEEECCCCEEECCCCC EQLKISGFRIEPGEIEASLQTSPSVAAAHVGVHDYGDGDLRLVAYVVPGQGVDAWTEQAR CCEEEECEEECCCCEEEEECCCCCCEEEECCCEECCCCCEEEEEEEECCCCCHHHHHHHH SEVAALMAENLPEYMRPSVYVPLAELPVTHHGKIDKQQLPSPAAGTALSGAADVKGLSEQ HHHHHHHHHCCHHHHCCCEEEEHHHCCCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCC EHFVLKVWSEDLGLKNIGVNDDFFDSGGTSLALIRSLSKLKTHYKINLDPGILADGATAK CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEECCCHHH VLADHITRSLVQAH HHHHHHHHHHHHCC >Mature Secondary Structure PITNTDESLSAASAPLKPGAFLHEIFSDRARQFPERTAVSDAARTLSYAQLDALSTKLA CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ARLRDEGVTYGTRVGMYLPRSVDLVTSLLGILKAGGTYVPVDPQYPGKRVEHIVRDSELS HHHHHCCCCEEEEECEECCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCEE LIIGDAANLPKISSLRVLALDELLSAPALQPAAQDTRIDPNNSTAYIIYTSGSTGEPKGV EEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCE QVSHGNVSRLLESTQRAYGFNAQDVWSMFHSIGFDFSVWEIWGALAHGGQVAVVPYDISR EECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCC SPAALRQWLADQRITVLSQTPSAFRGLDEADRGNTAPLALRYVVLGGEALPASVLRPWVE CHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH RHGDQKPALINMYGITEATVHTTFKRVLAQDLETAAMVSLGKPLHGWRLHLLDANQAPVA HCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEE AGTTGELYIEGAGVAQGYLNREALNVERFVELPGAVRAYRTGDLMTLESNGEYRYAGRCD CCCCCEEEEECCCHHHHHHCHHHHCHHHHHHCCCHHEEEECCCEEEEECCCCEEECCCCC EQLKISGFRIEPGEIEASLQTSPSVAAAHVGVHDYGDGDLRLVAYVVPGQGVDAWTEQAR CCEEEECEEECCCCEEEEECCCCCCEEEECCCEECCCCCEEEEEEEECCCCCHHHHHHHH SEVAALMAENLPEYMRPSVYVPLAELPVTHHGKIDKQQLPSPAAGTALSGAADVKGLSEQ HHHHHHHHHCCHHHHCCCEEEEHHHCCCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCC EHFVLKVWSEDLGLKNIGVNDDFFDSGGTSLALIRSLSKLKTHYKINLDPGILADGATAK CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEECCCHHH VLADHITRSLVQAH HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11112781; 9384377; 10568751; 8550523 [H]