| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045784
Identifier: 66045784
GI number: 66045784
Start: 2962772
End: 2963041
Strand: Reverse
Name: 66045784
Synonym: Psyr_2548
Alternate gene names: NA
Gene position: 2963041-2962772 (Counterclockwise)
Preceding gene: 66045801
Following gene: 66045783
Centisome position: 48.62
GC content: 42.59
Gene sequence:
>270_bases ATGACCATGAATTACGTTGTCGTCGTTAACGCGAGCGCTGACGCAATGGAACAAGCACCATTACTTCACGATGGAGTACA CAGCAAGTGGCGTGCCACCGTTATTGATCATCGTCTACTGGCAAGGCGTCAGATAACCGCCAACGCGGATCCGGAGTGCT ACCTGTCGAACGCCAAACCTTTAATTTCATTGAATTTTTTACGATCAGGCATTGAATATGACCACTTTAATATATGTATA AAATTATTTATAAGCCAATTTTGGAAATAG
Upstream 100 bases:
>100_bases CTGAATAAAAAGCACGAAAGTCCATGTATACCTTCCACTCGATAACGGTGACTTCATTGGGGCTGCTATTCGGCGTGCCG AGCAGCCCCCTGCCTGATCC
Downstream 100 bases:
>100_bases CAAAGTGCTACCTGTGTTTATTATTTCAGCGTCTGCACTTAACTGCACCACGCCGATTCGAACACTTTAAAATCGCCCTG TTTTGGTGGGCCGTCTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTMNYVVVVNASADAMEQAPLLHDGVHSKWRATVIDHRLLARRQITANADPECYLSNAKPLISLNFLRSGIEYDHFNICI KLFISQFWK
Sequences:
>Translated_89_residues MTMNYVVVVNASADAMEQAPLLHDGVHSKWRATVIDHRLLARRQITANADPECYLSNAKPLISLNFLRSGIEYDHFNICI KLFISQFWK >Mature_88_residues TMNYVVVVNASADAMEQAPLLHDGVHSKWRATVIDHRLLARRQITANADPECYLSNAKPLISLNFLRSGIEYDHFNICIK LFISQFWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10219; Mature: 10088
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMNYVVVVNASADAMEQAPLLHDGVHSKWRATVIDHRLLARRQITANADPECYLSNAKP CCCEEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC LISLNFLRSGIEYDHFNICIKLFISQFWK EEEHHHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TMNYVVVVNASADAMEQAPLLHDGVHSKWRATVIDHRLLARRQITANADPECYLSNAKP CCEEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC LISLNFLRSGIEYDHFNICIKLFISQFWK EEEHHHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA