| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045779
Identifier: 66045779
GI number: 66045779
Start: 2959044
End: 2959571
Strand: Direct
Name: 66045779
Synonym: Psyr_2543
Alternate gene names: NA
Gene position: 2959044-2959571 (Clockwise)
Preceding gene: 66045778
Following gene: 66045780
Centisome position: 48.56
GC content: 63.45
Gene sequence:
>528_bases ATGACATCGACCACTGAACATTCAACGACACCGGACGTGCTCGACAGCCTGCTGGGCATCGCGCCGGGCAGCCCGCTGCA CGCGGTTCGGCATGCGCGGGACAAGGTGGCCCTGGCAACCCAGGGCAGCCAGGACTTGTTTTTCGACCCGGCACTGGCGC ACAACCTGTCACTGAGCGAACGCCTCTGGGTGGCCTACTACGCAACGCTGCTGAGCGCGCAGCCGACCCTGAGCGGGTAT TACCTGTCGCAGTTGCAGACGGCCGGCGCCGAGGCAAACGTGCTGGCCGATGTGGACGCCAGCCGAATCGATCTGCTGGA GGATCAGCGTCTGGCGGCGATCCTGCGCTTTACGCGAACCTTGATCGAGTCTCCGGTACACGGCGATCAAAGCGCATTGC AGGCGCTGCAACAGCAGGGCCTGAGCACCGCTGAAATCGTGGTACTGGCGCAACTGATCGCTTTTCTGTCCTACCAGGTG CGTCTGGCCGCAGGGCTGGGTGCTTTAAAGTCTGCCGGAGCAGCCTGA
Upstream 100 bases:
>100_bases TGCAGCGACCATGGTCACCGAGCAGCCTTGATTTTCTTCCATGACCGCGCCGCTTTTGCCAGCGCTGCGCGAATGCAACT ACAGCCTCGCAGGACCTTTC
Downstream 100 bases:
>100_bases TGAGCGAACTCATAGAAATTGAAGGTTTCACCAATCAGGTGCTGGGCTGGAAAGCCTGGTTGCCCACCGTTGACCTCGAC AGCGCGAGCGCCGAGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTSTTEHSTTPDVLDSLLGIAPGSPLHAVRHARDKVALATQGSQDLFFDPALAHNLSLSERLWVAYYATLLSAQPTLSGY YLSQLQTAGAEANVLADVDASRIDLLEDQRLAAILRFTRTLIESPVHGDQSALQALQQQGLSTAEIVVLAQLIAFLSYQV RLAAGLGALKSAGAA
Sequences:
>Translated_175_residues MTSTTEHSTTPDVLDSLLGIAPGSPLHAVRHARDKVALATQGSQDLFFDPALAHNLSLSERLWVAYYATLLSAQPTLSGY YLSQLQTAGAEANVLADVDASRIDLLEDQRLAAILRFTRTLIESPVHGDQSALQALQQQGLSTAEIVVLAQLIAFLSYQV RLAAGLGALKSAGAA >Mature_174_residues TSTTEHSTTPDVLDSLLGIAPGSPLHAVRHARDKVALATQGSQDLFFDPALAHNLSLSERLWVAYYATLLSAQPTLSGYY LSQLQTAGAEANVLADVDASRIDLLEDQRLAAILRFTRTLIESPVHGDQSALQALQQQGLSTAEIVVLAQLIAFLSYQVR LAAGLGALKSAGAA
Specific function: Unknown
COG id: COG4950
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18566; Mature: 18435
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTTEHSTTPDVLDSLLGIAPGSPLHAVRHARDKVALATQGSQDLFFDPALAHNLSLSE CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCEECCHHHHCCCHHH RLWVAYYATLLSAQPTLSGYYLSQLQTAGAEANVLADVDASRIDLLEDQRLAAILRFTRT HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH LIESPVHGDQSALQALQQQGLSTAEIVVLAQLIAFLSYQVRLAAGLGALKSAGAA HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSTTEHSTTPDVLDSLLGIAPGSPLHAVRHARDKVALATQGSQDLFFDPALAHNLSLSE CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCEECCHHHHCCCHHH RLWVAYYATLLSAQPTLSGYYLSQLQTAGAEANVLADVDASRIDLLEDQRLAAILRFTRT HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH LIESPVHGDQSALQALQQQGLSTAEIVVLAQLIAFLSYQVRLAAGLGALKSAGAA HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA