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The map label for this gene is dppC [H]

Identifier: 66045775

GI number: 66045775

Start: 2954424

End: 2955344

Strand: Direct

Name: dppC [H]

Synonym: Psyr_2539

Alternate gene names: 66045775

Gene position: 2954424-2955344 (Clockwise)

Preceding gene: 66045774

Following gene: 66045776

Centisome position: 48.48

GC content: 61.02

Gene sequence:

>921_bases
ATGAATGTCATTGAAAAAGCCCCGATCGGCAGGACGCTGCTGCAGGCCCAATCGCCCTGGCGACGAGTGCTGACCGAGTT
CTTCAGCTCGCCCACGGCGGTGACGGGCCTGGTAGTCCTGCTGATCATTGTGCTGGTTGCAGCCCTGGCGCCGTGGATTG
TGGTGCAGAACCCCTACGACCTGATGCAGCTCAACGTCATGGATGCGCGCATGCCGCCTGGCAGCCTCAATGGGGACAGC
GGTTACACCTATTGGCTGGGCACTGACGGGCAGGGCCGCGATCTGGTCTCGGCGATTATCTATGGCCTGCGCATCAGCCT
GTGGGTCGGCATTGGCTCGGCGTTGATTGCGGCAGTGCTCGGTACGCTGCTCGGGCTGGTGTCTGCGTATGTAGGCGGCT
GGCTCGATGCTTTGCTGATGCGTCTGGTCGACCTGCTGCTGTCGTTTCCGGTGATTCTCATGGCGCTGATGATTCTTGCC
TGGCTGGGCAAGGGTGTCGGCAACGTGATGCTGACCCTGATCTTGCTCGAATGGGCTTATTACGCCCGCACAGCGCGCGG
TCAGGCGCTTACCGAAAGCCGCCGTGAATACGTTGATGCAGCGCGCGGGCAGGGCGTTGGTCCGCTGCGCATTGTGATCG
GCCACATTCTGCCCAACTGCCTGCCGCCGCTGATCGTGATCGGCGCCTTGCAGATTGCCCGCGCCATCACACTGGAAGCG
ACCCTGTCGTTTCTTGGCCTGGGCGTGCCGGTCACCGAGCCGTCGCTGGGGCTGCTGATTGCCAACGGCTTTCAATACAT
GCTCAGCAATGAATACTGGATCAGTCTGTTTCCGGGCCTGGCGCTGTTGATCACGATCGTTGCAATCAATCTGGTCGGTG
ACCGTTTGCGCGATGTCCTGAACCCGAGGTTACAGCGATGA

Upstream 100 bases:

>100_bases
CTTACCTGATGGTGGTCGTGGTGATTTTCGTGGTGCTCAACCTGATCGTCGACGGCTTGTATTACCTGCTGGACCCACGC
GTACGCATCGAGGCATCGCG

Downstream 100 bases:

>100_bases
GCGTGCCTGAAATGTCGTCTGTACCTGACGCAGTCCAACAGCCGACCCTGGAGGTGCGCAACCTGTGCACTTCGTTTCAT
ACCCGCGCCGGGGTGTTGCC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNVIEKAPIGRTLLQAQSPWRRVLTEFFSSPTAVTGLVVLLIIVLVAALAPWIVVQNPYDLMQLNVMDARMPPGSLNGDS
GYTYWLGTDGQGRDLVSAIIYGLRISLWVGIGSALIAAVLGTLLGLVSAYVGGWLDALLMRLVDLLLSFPVILMALMILA
WLGKGVGNVMLTLILLEWAYYARTARGQALTESRREYVDAARGQGVGPLRIVIGHILPNCLPPLIVIGALQIARAITLEA
TLSFLGLGVPVTEPSLGLLIANGFQYMLSNEYWISLFPGLALLITIVAINLVGDRLRDVLNPRLQR

Sequences:

>Translated_306_residues
MNVIEKAPIGRTLLQAQSPWRRVLTEFFSSPTAVTGLVVLLIIVLVAALAPWIVVQNPYDLMQLNVMDARMPPGSLNGDS
GYTYWLGTDGQGRDLVSAIIYGLRISLWVGIGSALIAAVLGTLLGLVSAYVGGWLDALLMRLVDLLLSFPVILMALMILA
WLGKGVGNVMLTLILLEWAYYARTARGQALTESRREYVDAARGQGVGPLRIVIGHILPNCLPPLIVIGALQIARAITLEA
TLSFLGLGVPVTEPSLGLLIANGFQYMLSNEYWISLFPGLALLITIVAINLVGDRLRDVLNPRLQR
>Mature_306_residues
MNVIEKAPIGRTLLQAQSPWRRVLTEFFSSPTAVTGLVVLLIIVLVAALAPWIVVQNPYDLMQLNVMDARMPPGSLNGDS
GYTYWLGTDGQGRDLVSAIIYGLRISLWVGIGSALIAAVLGTLLGLVSAYVGGWLDALLMRLVDLLLSFPVILMALMILA
WLGKGVGNVMLTLILLEWAYYARTARGQALTESRREYVDAARGQGVGPLRIVIGHILPNCLPPLIVIGALQIARAITLEA
TLSFLGLGVPVTEPSLGLLIANGFQYMLSNEYWISLFPGLALLITIVAINLVGDRLRDVLNPRLQR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=291, Percent_Identity=33.6769759450172, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1787760, Length=276, Percent_Identity=38.4057971014493, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1789964, Length=305, Percent_Identity=37.3770491803279, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1787498, Length=302, Percent_Identity=36.0927152317881, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1789889, Length=247, Percent_Identity=34.8178137651822, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI1788505, Length=232, Percent_Identity=27.5862068965517, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787549, Length=297, Percent_Identity=26.9360269360269, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33150; Mature: 33150

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIEKAPIGRTLLQAQSPWRRVLTEFFSSPTAVTGLVVLLIIVLVAALAPWIVVQNPYD
CCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCHH
LMQLNVMDARMPPGSLNGDSGYTYWLGTDGQGRDLVSAIIYGLRISLWVGIGSALIAAVL
HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLLGLVSAYVGGWLDALLMRLVDLLLSFPVILMALMILAWLGKGVGNVMLTLILLEWAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YARTARGQALTESRREYVDAARGQGVGPLRIVIGHILPNCLPPLIVIGALQIARAITLEA
HHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLSFLGLGVPVTEPSLGLLIANGFQYMLSNEYWISLFPGLALLITIVAINLVGDRLRDVL
HHHHHHCCCCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NPRLQR
CHHCCC
>Mature Secondary Structure
MNVIEKAPIGRTLLQAQSPWRRVLTEFFSSPTAVTGLVVLLIIVLVAALAPWIVVQNPYD
CCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCHH
LMQLNVMDARMPPGSLNGDSGYTYWLGTDGQGRDLVSAIIYGLRISLWVGIGSALIAAVL
HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLLGLVSAYVGGWLDALLMRLVDLLLSFPVILMALMILAWLGKGVGNVMLTLILLEWAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YARTARGQALTESRREYVDAARGQGVGPLRIVIGHILPNCLPPLIVIGALQIARAITLEA
HHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLSFLGLGVPVTEPSLGLLIANGFQYMLSNEYWISLFPGLALLITIVAINLVGDRLRDVL
HHHHHHCCCCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NPRLQR
CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]