Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66045738

Identifier: 66045738

GI number: 66045738

Start: 2912289

End: 2912648

Strand: Direct

Name: 66045738

Synonym: Psyr_2502

Alternate gene names: NA

Gene position: 2912289-2912648 (Clockwise)

Preceding gene: 66045737

Following gene: 66045739

Centisome position: 47.79

GC content: 60.0

Gene sequence:

>360_bases
ATGAAGTTTCTGTTTCTGACAAGCGCGACGGTGATTGCGGCAACCGTATTGACCGGGTGTGCAGCGCCTTCCAGTTCTGC
ACGTGCCGCAGGACCCTACAAGGTCCTGTCGAGCGCCAAGCAGGATGCTGCCGTTGCCCAGTGCATTCAGGTGACCTGGC
AGAACGAAGCCATGTTCGGCACGTCTACTGACGTGTTCCTGCATGACCTGTCCGGTGGCGGCTTCACCGTGTTTACCACT
GAATCGACCTACTTCGCCGACGTGCGCGGCAAAGGCCCGACCACCGCCGTTGAGTTCTATGCCCCGCAAGGCGATGCTCA
GGCCGCGTTGCGCTCTGCGGCCATTGCTACCTGTCTTTGA

Upstream 100 bases:

>100_bases
TCTGGCCGGCGAATACGTGAAGGAATACGAAGAGCAATTGGCTGAAGGTTGATAGCGCTGTGCAGTGCTAGAATCGGCTT
TTTATCAGCGAAGGCATGAC

Downstream 100 bases:

>100_bases
GTCTTTTCCCCACGCGCGCCCCCTGACACCTCTCGTTCCCACGCGCCAGCGCGGGAACGCCGTTCCACGCGCTCTGCGTC
CGCCCATCTGCGAGTTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKFLFLTSATVIAATVLTGCAAPSSSARAAGPYKVLSSAKQDAAVAQCIQVTWQNEAMFGTSTDVFLHDLSGGGFTVFTT
ESTYFADVRGKGPTTAVEFYAPQGDAQAALRSAAIATCL

Sequences:

>Translated_119_residues
MKFLFLTSATVIAATVLTGCAAPSSSARAAGPYKVLSSAKQDAAVAQCIQVTWQNEAMFGTSTDVFLHDLSGGGFTVFTT
ESTYFADVRGKGPTTAVEFYAPQGDAQAALRSAAIATCL
>Mature_119_residues
MKFLFLTSATVIAATVLTGCAAPSSSARAAGPYKVLSSAKQDAAVAQCIQVTWQNEAMFGTSTDVFLHDLSGGGFTVFTT
ESTYFADVRGKGPTTAVEFYAPQGDAQAALRSAAIATCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12296; Mature: 12296

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLFLTSATVIAATVLTGCAAPSSSARAAGPYKVLSSAKQDAAVAQCIQVTWQNEAMFG
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHEECCCEEEC
TSTDVFLHDLSGGGFTVFTTESTYFADVRGKGPTTAVEFYAPQGDAQAALRSAAIATCL
CCCEEEEEECCCCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFLFLTSATVIAATVLTGCAAPSSSARAAGPYKVLSSAKQDAAVAQCIQVTWQNEAMFG
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHEECCCEEEC
TSTDVFLHDLSGGGFTVFTTESTYFADVRGKGPTTAVEFYAPQGDAQAALRSAAIATCL
CCCEEEEEECCCCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA