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The map label for this gene is glgB [H]

Identifier: 66045727

GI number: 66045727

Start: 2897665

End: 2899890

Strand: Direct

Name: glgB [H]

Synonym: Psyr_2491

Alternate gene names: 66045727

Gene position: 2897665-2899890 (Clockwise)

Preceding gene: 66045726

Following gene: 66045730

Centisome position: 47.55

GC content: 60.29

Gene sequence:

>2226_bases
ATGAATGCGCCTGACAAAACCGGCACGCGCCGCCGCGCGATTCCCGCTGCTGTGGACCTCGACGCGCTGATCCGTGCTGA
ACACCGTGACCCGTTCTCTATCCTCGGCCCGCATGGTGATGGCGGCAGCGGGCAGTACGTCCGCGCCTACCTGCCCGCAG
CGTTGAGTGTCCGTCTGCTGGCCAGGGATGACGGTCGTGAACTGGGCGAGATGGAAATGAGCGAAGTGCCGGGGTTTTTC
GTCGGCCACCTCGAGCACCCGCAGCCTTACCTGCTGAAAATCAATTGGGCTGGCGGTGAACAGATCACCGAAGACCCTTA
CAGCTTTGGCCCGCTGCTGGGCGAGATGGACCTTTACCTGTTTGCCGAGGGTAATCATCGCGACCTGAGCAGCTGTCTGG
GCGCGCAAGTCACCAGCGTCGATGGCGTGGACGGTGTGCGTTTTGCGGTCTGGGCACCCAATGCGCGTCGTGTTTCGGTG
GTTGGCAGCTTCAACAGCTGGGATGGACGTCGCCATCCCATGCGCATGCGCCACCCGACCGGCGTATGGGAGATTTTCGT
CCCGCGTCTGCAGCCCGGCGAGGTCTATAAGTACGAGATTCTCGGTGCTCACGGGATTCTGCCGTTGAAAAGCGATCCGA
TGGCCTTGTCCACCACATTGCCGCCCGATACCGCGTCGAAGATCGCTGCGCCATTGCAATTCGAATGGAATGACCAGGAG
TGGCTGCAGTCGAGGGCAGGGCGCCACGAAGTCACTGCACCGCTGTCGATCTACGAGTTGCACGCAGGCTCCTGGCAAAT
GGAGCAGGTCGAAGATAATCAATGGCGGCAGTACAACTGGCGTGAACTGGCTGATCGCCTGATTCCTTACGTCAAGGAAC
TTGGCTTCACGCACATCGAACTGATGCCGATCATGGAACACCCATTCGGTGGTTCATGGGGCTATCAGTTACTGGCCCAG
TTCGCGCCAACCGCCCGTTACGGTTCGCCGGAAGATTTCGCCTTTTTCGTCGATGCCTGTCACCGGGCTGAAATCGGCGT
CATTCTTGACTGGGTTCCAGCGCACTTTCCGACCGATACCCATGGTCTGGCGCAGTTCGACGGTACTTGCCTGTATGAGT
ACGCGGACCCCAAGGAAGGCTTCCATCAGGACTGGAACACGCTGATCTATAACCTGGGACGCACCGAGGTTCATGGTTTC
ATGCTGGCCTCGGCACTGCACTGGCTCAAGCATTACCACATCGACGGTCTGCGCGTGGATGCGGTGGCGTCGATGCTCTA
CCGCGACTACTCGCGTAATGCCGGCGAATGGGTGACGAATCGCTTCGGCGGCCGCGAAAACCTCGAGGCCATCGACTTCC
TGCGTCATTTGAACGACGTGGTTGCGCTGGAAGCCCCCGGGACCATGGTGATTGCCGAAGAGTCGACCGCGTGGCCGGGT
GTCAGCGAGCCGACCCAGCAGGGCGGGCTTGGCTTCAATTACAAGTGGAACATGGGCTGGATGCATGACTCGCTGCAGTA
CATGGAAGAGGACCCGATCAACCGCGGGCATCACCATGGCAAGCTGAGCTTCAGCCTGGTGTATGCGTGGTCCGAGCGTT
TCGTACTGCCTATTTCCCACGACGAAGTGGTGCACGGCAAACATTCGCTGATCGACAAGATGCCAGGCGATCGCTGGCAG
AAATTCGCCAACCTGCGCGCCTATCTGTCATTCATGTGGACGCATCCCGGCAAGAAGCTGCTGTTCATGGGCTGCGAATT
CGGCCAATGGCGCGAGTGGAATCACGACAGGGAACTGGACTGGTACTTGATGCAATACGCCGAGCACGTGGGCGTGAAGA
ACCTGGTCGGCGACCTGAACCGCCTCTATCGCGAGGAAAAGGCGCTGCACGAGCGCGATGCAGACCCTGCCGGTTTCCAG
TGGCTGGTCGGCGATGACAGTGCCAACAGCGTGTTTGCGTACCTGCGCTGGAGCAACGACGGCGAACCGCTGCTGGTGGT
CGCCAACATGACCCCGGTGCCGCGCCTGGACTACCGTCTTGGCGCGCCGATGCGAGGTGCCTGGACGGAGCTGCTCAACA
GTGACGCGGAAACCTACGCGGGCTCCAACTTTGGCAATGGTGGCGAGGTCATGACCGAAGCCGAGCCGGCGCATGGGATG
GAGGATTCGCTGGTGCTGAATCTGCCACCCCTCGCGGTGCTGATCCTCAAACCGAAGAAAGACTGA

Upstream 100 bases:

>100_bases
CTTATGAAGTGATCTACGAAGCCGAGAACCGTCCAGCCTGGCTGGCCGTTCCCTTGCAAGGCTTGCGTGGGTTGCTGCAA
CCGTCTGATGGAGAGTCAAT

Downstream 100 bases:

>100_bases
TCAAGGCGCGTCCCCGCGCCAACGATCGCATTACCACACCAGCCTGAACCCCAGGCTGGTGTTCACTCCCTGCGCTCCGT
CGTCGTCCAGATCACTGAGA

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 741; Mature: 741

Protein sequence:

>741_residues
MNAPDKTGTRRRAIPAAVDLDALIRAEHRDPFSILGPHGDGGSGQYVRAYLPAALSVRLLARDDGRELGEMEMSEVPGFF
VGHLEHPQPYLLKINWAGGEQITEDPYSFGPLLGEMDLYLFAEGNHRDLSSCLGAQVTSVDGVDGVRFAVWAPNARRVSV
VGSFNSWDGRRHPMRMRHPTGVWEIFVPRLQPGEVYKYEILGAHGILPLKSDPMALSTTLPPDTASKIAAPLQFEWNDQE
WLQSRAGRHEVTAPLSIYELHAGSWQMEQVEDNQWRQYNWRELADRLIPYVKELGFTHIELMPIMEHPFGGSWGYQLLAQ
FAPTARYGSPEDFAFFVDACHRAEIGVILDWVPAHFPTDTHGLAQFDGTCLYEYADPKEGFHQDWNTLIYNLGRTEVHGF
MLASALHWLKHYHIDGLRVDAVASMLYRDYSRNAGEWVTNRFGGRENLEAIDFLRHLNDVVALEAPGTMVIAEESTAWPG
VSEPTQQGGLGFNYKWNMGWMHDSLQYMEEDPINRGHHHGKLSFSLVYAWSERFVLPISHDEVVHGKHSLIDKMPGDRWQ
KFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDRELDWYLMQYAEHVGVKNLVGDLNRLYREEKALHERDADPAGFQ
WLVGDDSANSVFAYLRWSNDGEPLLVVANMTPVPRLDYRLGAPMRGAWTELLNSDAETYAGSNFGNGGEVMTEAEPAHGM
EDSLVLNLPPLAVLILKPKKD

Sequences:

>Translated_741_residues
MNAPDKTGTRRRAIPAAVDLDALIRAEHRDPFSILGPHGDGGSGQYVRAYLPAALSVRLLARDDGRELGEMEMSEVPGFF
VGHLEHPQPYLLKINWAGGEQITEDPYSFGPLLGEMDLYLFAEGNHRDLSSCLGAQVTSVDGVDGVRFAVWAPNARRVSV
VGSFNSWDGRRHPMRMRHPTGVWEIFVPRLQPGEVYKYEILGAHGILPLKSDPMALSTTLPPDTASKIAAPLQFEWNDQE
WLQSRAGRHEVTAPLSIYELHAGSWQMEQVEDNQWRQYNWRELADRLIPYVKELGFTHIELMPIMEHPFGGSWGYQLLAQ
FAPTARYGSPEDFAFFVDACHRAEIGVILDWVPAHFPTDTHGLAQFDGTCLYEYADPKEGFHQDWNTLIYNLGRTEVHGF
MLASALHWLKHYHIDGLRVDAVASMLYRDYSRNAGEWVTNRFGGRENLEAIDFLRHLNDVVALEAPGTMVIAEESTAWPG
VSEPTQQGGLGFNYKWNMGWMHDSLQYMEEDPINRGHHHGKLSFSLVYAWSERFVLPISHDEVVHGKHSLIDKMPGDRWQ
KFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDRELDWYLMQYAEHVGVKNLVGDLNRLYREEKALHERDADPAGFQ
WLVGDDSANSVFAYLRWSNDGEPLLVVANMTPVPRLDYRLGAPMRGAWTELLNSDAETYAGSNFGNGGEVMTEAEPAHGM
EDSLVLNLPPLAVLILKPKKD
>Mature_741_residues
MNAPDKTGTRRRAIPAAVDLDALIRAEHRDPFSILGPHGDGGSGQYVRAYLPAALSVRLLARDDGRELGEMEMSEVPGFF
VGHLEHPQPYLLKINWAGGEQITEDPYSFGPLLGEMDLYLFAEGNHRDLSSCLGAQVTSVDGVDGVRFAVWAPNARRVSV
VGSFNSWDGRRHPMRMRHPTGVWEIFVPRLQPGEVYKYEILGAHGILPLKSDPMALSTTLPPDTASKIAAPLQFEWNDQE
WLQSRAGRHEVTAPLSIYELHAGSWQMEQVEDNQWRQYNWRELADRLIPYVKELGFTHIELMPIMEHPFGGSWGYQLLAQ
FAPTARYGSPEDFAFFVDACHRAEIGVILDWVPAHFPTDTHGLAQFDGTCLYEYADPKEGFHQDWNTLIYNLGRTEVHGF
MLASALHWLKHYHIDGLRVDAVASMLYRDYSRNAGEWVTNRFGGRENLEAIDFLRHLNDVVALEAPGTMVIAEESTAWPG
VSEPTQQGGLGFNYKWNMGWMHDSLQYMEEDPINRGHHHGKLSFSLVYAWSERFVLPISHDEVVHGKHSLIDKMPGDRWQ
KFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDRELDWYLMQYAEHVGVKNLVGDLNRLYREEKALHERDADPAGFQ
WLVGDDSANSVFAYLRWSNDGEPLLVVANMTPVPRLDYRLGAPMRGAWTELLNSDAETYAGSNFGNGGEVMTEAEPAHGM
EDSLVLNLPPLAVLILKPKKD

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=638, Percent_Identity=27.4294670846395, Blast_Score=186, Evalue=7e-47,
Organism=Escherichia coli, GI1789839, Length=722, Percent_Identity=54.016620498615, Blast_Score=790, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=658, Percent_Identity=27.5075987841945, Blast_Score=190, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI32564391, Length=626, Percent_Identity=27.1565495207668, Blast_Score=171, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6320826, Length=656, Percent_Identity=26.6768292682927, Blast_Score=171, Evalue=3e-43,
Organism=Drosophila melanogaster, GI28573410, Length=605, Percent_Identity=28.4297520661157, Blast_Score=175, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 84063; Mature: 84063

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPDKTGTRRRAIPAAVDLDALIRAEHRDPFSILGPHGDGGSGQYVRAYLPAALSVRLL
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCEEEEECCHHHEEEEE
ARDDGRELGEMEMSEVPGFFVGHLEHPQPYLLKINWAGGEQITEDPYSFGPLLGEMDLYL
ECCCCCHHCCCHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCCEEEE
FAEGNHRDLSSCLGAQVTSVDGVDGVRFAVWAPNARRVSVVGSFNSWDGRRHPMRMRHPT
EECCCCHHHHHHHCCEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
GVWEIFVPRLQPGEVYKYEILGAHGILPLKSDPMALSTTLPPDTASKIAAPLQFEWNDQE
CEEEEEECCCCCCCEEEEEEECCCCEEECCCCCCEEEECCCCCCHHHHCCCEEEECCCHH
WLQSRAGRHEVTAPLSIYELHAGSWQMEQVEDNQWRQYNWRELADRLIPYVKELGFTHIE
HHHHCCCCCCCCCCEEEEEECCCCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
LMPIMEHPFGGSWGYQLLAQFAPTARYGSPEDFAFFVDACHRAEIGVILDWVPAHFPTDT
EEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCC
HGLAQFDGTCLYEYADPKEGFHQDWNTLIYNLGRTEVHGFMLASALHWLKHYHIDGLRVD
CCHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHH
AVASMLYRDYSRNAGEWVTNRFGGRENLEAIDFLRHLNDVVALEAPGTMVIAEESTAWPG
HHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCC
VSEPTQQGGLGFNYKWNMGWMHDSLQYMEEDPINRGHHHGKLSFSLVYAWSERFVLPISH
CCCCHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEECC
DEVVHGKHSLIDKMPGDRWQKFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDRELD
CCHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHH
WYLMQYAEHVGVKNLVGDLNRLYREEKALHERDADPAGFQWLVGDDSANSVFAYLRWSND
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCC
GEPLLVVANMTPVPRLDYRLGAPMRGAWTELLNSDAETYAGSNFGNGGEVMTEAEPAHGM
CCEEEEEECCCCCCCCCHHCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCC
EDSLVLNLPPLAVLILKPKKD
CCCEEEECCCEEEEEEECCCC
>Mature Secondary Structure
MNAPDKTGTRRRAIPAAVDLDALIRAEHRDPFSILGPHGDGGSGQYVRAYLPAALSVRLL
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCEEEEECCHHHEEEEE
ARDDGRELGEMEMSEVPGFFVGHLEHPQPYLLKINWAGGEQITEDPYSFGPLLGEMDLYL
ECCCCCHHCCCHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCCEEEE
FAEGNHRDLSSCLGAQVTSVDGVDGVRFAVWAPNARRVSVVGSFNSWDGRRHPMRMRHPT
EECCCCHHHHHHHCCEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
GVWEIFVPRLQPGEVYKYEILGAHGILPLKSDPMALSTTLPPDTASKIAAPLQFEWNDQE
CEEEEEECCCCCCCEEEEEEECCCCEEECCCCCCEEEECCCCCCHHHHCCCEEEECCCHH
WLQSRAGRHEVTAPLSIYELHAGSWQMEQVEDNQWRQYNWRELADRLIPYVKELGFTHIE
HHHHCCCCCCCCCCEEEEEECCCCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
LMPIMEHPFGGSWGYQLLAQFAPTARYGSPEDFAFFVDACHRAEIGVILDWVPAHFPTDT
EEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCC
HGLAQFDGTCLYEYADPKEGFHQDWNTLIYNLGRTEVHGFMLASALHWLKHYHIDGLRVD
CCHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHH
AVASMLYRDYSRNAGEWVTNRFGGRENLEAIDFLRHLNDVVALEAPGTMVIAEESTAWPG
HHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCC
VSEPTQQGGLGFNYKWNMGWMHDSLQYMEEDPINRGHHHGKLSFSLVYAWSERFVLPISH
CCCCHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEECC
DEVVHGKHSLIDKMPGDRWQKFANLRAYLSFMWTHPGKKLLFMGCEFGQWREWNHDRELD
CCHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHH
WYLMQYAEHVGVKNLVGDLNRLYREEKALHERDADPAGFQWLVGDDSANSVFAYLRWSND
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCC
GEPLLVVANMTPVPRLDYRLGAPMRGAWTELLNSDAETYAGSNFGNGGEVMTEAEPAHGM
CCEEEEEECCCCCCCCCHHCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCC
EDSLVLNLPPLAVLILKPKKD
CCCEEEECCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA