| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is accA1 [H]
Identifier: 66045703
GI number: 66045703
Start: 2858815
End: 2860764
Strand: Reverse
Name: accA1 [H]
Synonym: Psyr_2467
Alternate gene names: 66045703
Gene position: 2860764-2858815 (Counterclockwise)
Preceding gene: 66045704
Following gene: 66045700
Centisome position: 46.95
GC content: 63.9
Gene sequence:
>1950_bases ATGAGCATGCCCGAGCTGACCACGCTGTTGATTGCCAACCGCGGCGAGATCGCCTGCCGCATCATGCGCACGGCGAAAAA CATGGGCCTTACCACGGTCGCCGTGCACAGCGCCATTGACCGTGACGCACGGCATAGCCGCGAGGCCGATCTCTGCGTGG ACCTTGGCGGCAGCAAAGCCGCAGACAGTTATCTGGCGATCGACAGGCTTATCGAAGCCGCCCGGGCGAGTGGCGCGCAC GCGATCCATCCCGGCTACGGTTTTCTGTCTGAAAACGCCGATTTTGCGCGTGCCGTCGAAGACGCCGGGCTGATTTTCCT CGGCCCACCCGCCTCGGCCATCGATGCCATGGGCAGCAAATCCGCTGCCAAGGCCTTGATGGAGCAGGCAGGCGTGCCGT TGGTGCCGGGCTATCACGGTGAAGCACAGGACGTCGAGACGTTCCGCGCCGCTGCCGAGCGTATCGGCTACCCGGTGCTG TTGAAAGCCACCGCTGGCGGCGGCGGCAAAGGCATGAAAGTGGTCGAGCATACGGGTGAACTGGCCGAAGCGCTGGCTTC CGCGCAACGCGAGGCGCTGTCCTCGTTCGGTGACGCGAGGATGCTGGTGGAGAAGTACGTGCTCACCCCGCGCCACGTCG AAATCCAGGTGTTTGCCGACCGGCATGGCAACTGCCTGTACCTCAATGAGCGCGATTGCTCCATTCAGCGCCGACACCAG AAGGTTGTCGAGGAAGCACCGGCGCCCGGCCTGACGGCCTCATTGCGCAAGGCCATGGGCGAAGCCGCGGTGAAAGCCGC ACAAGCCATCGGCTACGTCGGTGCGGGTACGGTGGAGTTCCTGCTGGACGCACGCGGCGAGTTTTTCTTCATGGAAATGA ATACCCGCCTGCAGGTAGAGCATCCGGTCACCGAGTACATCACGGGGCTGGACCTGGTGGAATGGCAGATCCGTGTCGCC AGAGGCGAATCGCTACCCATCACCCAGGAGCAGGTGCCCCTGACCGGCCACGCCATCGAGGTCCGTCTGTACGCCGAAGA CCCGGTCAACGACTTTCTTCCGGCCACCGGCACGCTGGAGCTCTACAGAGAGCCTGCGCCCGGCCCCGGCAGGCGGGTGG ACAGCGGCGTTGCCGAGGGCGACAGCATTTCGCCCTTCTACGACCCGATGCTCGGCAAGCTGATTGCCTGGGGCGAAGAC CGCGAGCAAGCCCGCCTGCGCCTGCTGGCCATGCTCGATGAATTTGCAGTGGGCGGAGTCAGGACCAACCTGGCGTTTCT GCGCAGAATCATCGCGCATCCAGCGTTCGCCGCCGCGCAGCTTGATACCGGCTTCATTCCCCACCATCAGGCGCAACTGC TGCCGCACACCAATGAGCCGGACGAGACATTCTGGCAGGCCGCTGCCGAGGCCTTCAGCCAGAGCGAACCGGCACGCATC GATCAAGCCGATCCGTATTCGCCCTGGGCAGTCAGCAGCGGCTTTCGCGCCGGCCTGCCTGCGCAGACGGATCTGCGACT GAGCTGCAACGGTCTAACCCGCAACACCTGCCTGCGCAACAGCAGCCCCTCGTTATTCACTCTGAGTGGCGAGCATTTGC AGGTCGAGCACAACGGTGTGCGCCAACGACACCTGGCGATACGACGCGGCAATACGCTGTATCTCGAATGGCAAGGCGAG GTGCAAACCGTCACCCGCCTGGACGCCATCGCCCAGGCAGACGTCGGTGAGGGTCAGCATGCAGGCCTGACAGCACCGAT GAATGGCAGCATCGTACGGGTATTGGTTGAAGTGGGTCAGGCTGTCGAGCCTGGCGCGCAACTGGTGGTGCTGGAAGCCA TGAAGATGGAACACAGCATCCGCGCCGCCAGCGCCGGAGTGATTACCGCGCTCTACTGCCACGAGGGAGAGATGGTCAAC GAAGGCGCGGTGCTGGTGGAGCTGGACTGA
Upstream 100 bases:
>100_bases AACGCACACCTGGCTGGCAGCCCGTCAAGGATCAGCCGCCTGGCAATCCCGTTCCAGCAGCCTCGACAGCCCGGCACGAA CCTCAGAAGGACTCGCAATC
Downstream 100 bases:
>100_bases CGCTCGTCAACCGCCACACATGAAAACGCCCTGAACAGTCAGGGCGTTTTCGTGCAGCAACTTTCGTGCAGCAACTTCCT TGCAAAAAAGAGACGCCTAG
Product: carbamoyl-phosphate synthase subunit L
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MSMPELTTLLIANRGEIACRIMRTAKNMGLTTVAVHSAIDRDARHSREADLCVDLGGSKAADSYLAIDRLIEAARASGAH AIHPGYGFLSENADFARAVEDAGLIFLGPPASAIDAMGSKSAAKALMEQAGVPLVPGYHGEAQDVETFRAAAERIGYPVL LKATAGGGGKGMKVVEHTGELAEALASAQREALSSFGDARMLVEKYVLTPRHVEIQVFADRHGNCLYLNERDCSIQRRHQ KVVEEAPAPGLTASLRKAMGEAAVKAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVEHPVTEYITGLDLVEWQIRVA RGESLPITQEQVPLTGHAIEVRLYAEDPVNDFLPATGTLELYREPAPGPGRRVDSGVAEGDSISPFYDPMLGKLIAWGED REQARLRLLAMLDEFAVGGVRTNLAFLRRIIAHPAFAAAQLDTGFIPHHQAQLLPHTNEPDETFWQAAAEAFSQSEPARI DQADPYSPWAVSSGFRAGLPAQTDLRLSCNGLTRNTCLRNSSPSLFTLSGEHLQVEHNGVRQRHLAIRRGNTLYLEWQGE VQTVTRLDAIAQADVGEGQHAGLTAPMNGSIVRVLVEVGQAVEPGAQLVVLEAMKMEHSIRAASAGVITALYCHEGEMVN EGAVLVELD
Sequences:
>Translated_649_residues MSMPELTTLLIANRGEIACRIMRTAKNMGLTTVAVHSAIDRDARHSREADLCVDLGGSKAADSYLAIDRLIEAARASGAH AIHPGYGFLSENADFARAVEDAGLIFLGPPASAIDAMGSKSAAKALMEQAGVPLVPGYHGEAQDVETFRAAAERIGYPVL LKATAGGGGKGMKVVEHTGELAEALASAQREALSSFGDARMLVEKYVLTPRHVEIQVFADRHGNCLYLNERDCSIQRRHQ KVVEEAPAPGLTASLRKAMGEAAVKAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVEHPVTEYITGLDLVEWQIRVA RGESLPITQEQVPLTGHAIEVRLYAEDPVNDFLPATGTLELYREPAPGPGRRVDSGVAEGDSISPFYDPMLGKLIAWGED REQARLRLLAMLDEFAVGGVRTNLAFLRRIIAHPAFAAAQLDTGFIPHHQAQLLPHTNEPDETFWQAAAEAFSQSEPARI DQADPYSPWAVSSGFRAGLPAQTDLRLSCNGLTRNTCLRNSSPSLFTLSGEHLQVEHNGVRQRHLAIRRGNTLYLEWQGE VQTVTRLDAIAQADVGEGQHAGLTAPMNGSIVRVLVEVGQAVEPGAQLVVLEAMKMEHSIRAASAGVITALYCHEGEMVN EGAVLVELD >Mature_648_residues SMPELTTLLIANRGEIACRIMRTAKNMGLTTVAVHSAIDRDARHSREADLCVDLGGSKAADSYLAIDRLIEAARASGAHA IHPGYGFLSENADFARAVEDAGLIFLGPPASAIDAMGSKSAAKALMEQAGVPLVPGYHGEAQDVETFRAAAERIGYPVLL KATAGGGGKGMKVVEHTGELAEALASAQREALSSFGDARMLVEKYVLTPRHVEIQVFADRHGNCLYLNERDCSIQRRHQK VVEEAPAPGLTASLRKAMGEAAVKAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVEHPVTEYITGLDLVEWQIRVAR GESLPITQEQVPLTGHAIEVRLYAEDPVNDFLPATGTLELYREPAPGPGRRVDSGVAEGDSISPFYDPMLGKLIAWGEDR EQARLRLLAMLDEFAVGGVRTNLAFLRRIIAHPAFAAAQLDTGFIPHHQAQLLPHTNEPDETFWQAAAEAFSQSEPARID QADPYSPWAVSSGFRAGLPAQTDLRLSCNGLTRNTCLRNSSPSLFTLSGEHLQVEHNGVRQRHLAIRRGNTLYLEWQGEV QTVTRLDAIAQADVGEGQHAGLTAPMNGSIVRVLVEVGQAVEPGAQLVVLEAMKMEHSIRAASAGVITALYCHEGEMVNE GAVLVELD
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=667, Percent_Identity=45.2773613193403, Blast_Score=589, Evalue=1e-168, Organism=Homo sapiens, GI189095269, Length=675, Percent_Identity=41.6296296296296, Blast_Score=491, Evalue=1e-139, Organism=Homo sapiens, GI65506442, Length=668, Percent_Identity=42.0658682634731, Blast_Score=491, Evalue=1e-138, Organism=Homo sapiens, GI295821183, Length=661, Percent_Identity=40.695915279879, Blast_Score=462, Evalue=1e-130, Organism=Homo sapiens, GI106049528, Length=460, Percent_Identity=44.7826086956522, Blast_Score=368, Evalue=1e-101, Organism=Homo sapiens, GI106049295, Length=460, Percent_Identity=44.7826086956522, Blast_Score=368, Evalue=1e-101, Organism=Homo sapiens, GI106049292, Length=460, Percent_Identity=44.7826086956522, Blast_Score=368, Evalue=1e-101, Organism=Homo sapiens, GI38679960, Length=714, Percent_Identity=27.8711484593838, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI38679977, Length=714, Percent_Identity=27.8711484593838, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI38679967, Length=714, Percent_Identity=27.8711484593838, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI38679974, Length=714, Percent_Identity=27.8711484593838, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI38679971, Length=714, Percent_Identity=27.8711484593838, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI134142062, Length=724, Percent_Identity=27.2099447513812, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI18105007, Length=267, Percent_Identity=26.9662921348315, Blast_Score=76, Evalue=8e-14, Organism=Escherichia coli, GI1789654, Length=432, Percent_Identity=52.5462962962963, Blast_Score=423, Evalue=1e-119, Organism=Caenorhabditis elegans, GI71987519, Length=658, Percent_Identity=45.2887537993921, Blast_Score=541, Evalue=1e-154, Organism=Caenorhabditis elegans, GI17567343, Length=682, Percent_Identity=40.9090909090909, Blast_Score=493, Evalue=1e-139, Organism=Caenorhabditis elegans, GI17562816, Length=461, Percent_Identity=43.3839479392625, Blast_Score=365, Evalue=1e-101, Organism=Caenorhabditis elegans, GI133931226, Length=487, Percent_Identity=28.5420944558522, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71997163, Length=655, Percent_Identity=25.4961832061069, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71997168, Length=437, Percent_Identity=29.0617848970252, Blast_Score=193, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6319685, Length=448, Percent_Identity=43.75, Blast_Score=384, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6319695, Length=449, Percent_Identity=43.652561247216, Blast_Score=348, Evalue=2e-96, Organism=Saccharomyces cerevisiae, GI6321376, Length=449, Percent_Identity=44.7661469933185, Blast_Score=346, Evalue=7e-96, Organism=Saccharomyces cerevisiae, GI6324343, Length=716, Percent_Identity=27.9329608938547, Blast_Score=236, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6323863, Length=682, Percent_Identity=27.1260997067449, Blast_Score=231, Evalue=3e-61, Organism=Drosophila melanogaster, GI24651757, Length=671, Percent_Identity=42.4739195230999, Blast_Score=532, Evalue=1e-151, Organism=Drosophila melanogaster, GI24651759, Length=632, Percent_Identity=41.9303797468354, Blast_Score=489, Evalue=1e-138, Organism=Drosophila melanogaster, GI281363050, Length=449, Percent_Identity=46.1024498886414, Blast_Score=374, Evalue=1e-103, Organism=Drosophila melanogaster, GI24652224, Length=449, Percent_Identity=46.1024498886414, Blast_Score=374, Evalue=1e-103, Organism=Drosophila melanogaster, GI24652222, Length=449, Percent_Identity=46.1024498886414, Blast_Score=374, Evalue=1e-103, Organism=Drosophila melanogaster, GI24652220, Length=449, Percent_Identity=46.1024498886414, Blast_Score=374, Evalue=1e-103, Organism=Drosophila melanogaster, GI24652218, Length=449, Percent_Identity=46.1024498886414, Blast_Score=374, Evalue=1e-103, Organism=Drosophila melanogaster, GI24652212, Length=449, Percent_Identity=46.1024498886414, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI24652210, Length=449, Percent_Identity=46.1024498886414, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI24652214, Length=449, Percent_Identity=46.1024498886414, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI19921944, Length=449, Percent_Identity=46.1024498886414, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI24652216, Length=449, Percent_Identity=46.1024498886414, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI161076409, Length=721, Percent_Identity=28.8488210818308, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI161076407, Length=721, Percent_Identity=28.8488210818308, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24586460, Length=721, Percent_Identity=28.8488210818308, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24586458, Length=721, Percent_Identity=28.8488210818308, Blast_Score=246, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 70049; Mature: 69918
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPELTTLLIANRGEIACRIMRTAKNMGLTTVAVHSAIDRDARHSREADLCVDLGGSKA CCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC ADSYLAIDRLIEAARASGAHAIHPGYGFLSENADFARAVEDAGLIFLGPPASAIDAMGSK CHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCCEEEECCCHHHHHHCCCH SAAKALMEQAGVPLVPGYHGEAQDVETFRAAAERIGYPVLLKATAGGGGKGMKVVEHTGE HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHH LAEALASAQREALSSFGDARMLVEKYVLTPRHVEIQVFADRHGNCLYLNERDCSIQRRHQ HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHH KVVEEAPAPGLTASLRKAMGEAAVKAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVE HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCEEEEC HPVTEYITGLDLVEWQIRVARGESLPITQEQVPLTGHAIEVRLYAEDPVNDFLPATGTLE CCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCEE LYREPAPGPGRRVDSGVAEGDSISPFYDPMLGKLIAWGEDREQARLRLLAMLDEFAVGGV EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCH RTNLAFLRRIIAHPAFAAAQLDTGFIPHHQAQLLPHTNEPDETFWQAAAEAFSQSEPARI HHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC DQADPYSPWAVSSGFRAGLPAQTDLRLSCNGLTRNTCLRNSSPSLFTLSGEHLQVEHNGV CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCEEEECCCEEEEECCCC RQRHLAIRRGNTLYLEWQGEVQTVTRLDAIAQADVGEGQHAGLTAPMNGSIVRVLVEVGQ HHHHHEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC AVEPGAQLVVLEAMKMEHSIRAASAGVITALYCHEGEMVNEGAVLVELD CCCCCCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCEECCCEEEEEEC >Mature Secondary Structure SMPELTTLLIANRGEIACRIMRTAKNMGLTTVAVHSAIDRDARHSREADLCVDLGGSKA CCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC ADSYLAIDRLIEAARASGAHAIHPGYGFLSENADFARAVEDAGLIFLGPPASAIDAMGSK CHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCCEEEECCCHHHHHHCCCH SAAKALMEQAGVPLVPGYHGEAQDVETFRAAAERIGYPVLLKATAGGGGKGMKVVEHTGE HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHH LAEALASAQREALSSFGDARMLVEKYVLTPRHVEIQVFADRHGNCLYLNERDCSIQRRHQ HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHH KVVEEAPAPGLTASLRKAMGEAAVKAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVE HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCEEEEC HPVTEYITGLDLVEWQIRVARGESLPITQEQVPLTGHAIEVRLYAEDPVNDFLPATGTLE CCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCEE LYREPAPGPGRRVDSGVAEGDSISPFYDPMLGKLIAWGEDREQARLRLLAMLDEFAVGGV EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCH RTNLAFLRRIIAHPAFAAAQLDTGFIPHHQAQLLPHTNEPDETFWQAAAEAFSQSEPARI HHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC DQADPYSPWAVSSGFRAGLPAQTDLRLSCNGLTRNTCLRNSSPSLFTLSGEHLQVEHNGV CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCEEEECCCEEEEECCCC RQRHLAIRRGNTLYLEWQGEVQTVTRLDAIAQADVGEGQHAGLTAPMNGSIVRVLVEVGQ HHHHHEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC AVEPGAQLVVLEAMKMEHSIRAASAGVITALYCHEGEMVNEGAVLVELD CCCCCCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]