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The map label for this gene is ugpA [C]

Identifier: 66045675

GI number: 66045675

Start: 2823940

End: 2824872

Strand: Reverse

Name: ugpA [C]

Synonym: Psyr_2439

Alternate gene names: 66045675

Gene position: 2824872-2823940 (Counterclockwise)

Preceding gene: 66045676

Following gene: 66045674

Centisome position: 46.36

GC content: 58.63

Gene sequence:

>933_bases
ATGAATACCTCAGCCTCCCCTGAACGCACGGACCTGTCCGGCGAACAGCAACCGCTCAAAAACCGTCGATTCAAGCCGGG
CTGGTTTCTGGTCAGTCCTTCGGTAGCGCTTCTGCTGGTGTGGATGATCGTGCCGCTGGGCATGACCATTTACTTCTCGC
TGATCCGCTACAACCTGCTCTCCCCCGGCGAAAACGAATTCGTTGGCCTGGAGAACTTCCAGTATTTCGTGACCGACAGC
GGCTTTTTGCCGGGTGCCGGCAATACCCTGCTGCTGGTCGGCAGCGTGCTGGCGATCAGTGTGATCTTCGGCGTGCTGAT
TTCGGCGCTGCTGGAGGCCAGCGAGTTTTTCGGTCGCGGCATCGTCCGTGTGCTGTTGATCTCGCCGTTCTTCATCATGC
CCACGGTCAGTGCGCTGATCTGGAAAAACCTGATCTTTCATCCGGTATCCGGCGTACTTGCGGCGGTCTGGAAGTTCTTC
GGCGCCGAACCGATTGACTGGTTCGCCCATTACCCGATGCTGTCGATCATCATCATTGTGTCCTGGCAATGGCTGCCGTT
CGCCATTCTGATCCTGATGACCGCCATGCAGTCACTGGATCAGGAGCAGAAAGAAGCAGCGCGGCTGGATGGCGCAGGTC
CGCTGGCGATCTTCTGGCACCTGACCCTGCCGCACCTGGCGCGTCCGATTGCCGTGGTGGTGATGATCGAAACGATCTTC
CTGCTTTCGGTATTCGCTGAAATCTTCACCACGACCAACGGCGGGCCGGGCTTTGCCTCGACCAACCTGGCTTACCTGAT
CTACATCCAGGCGCTGCTGCAGTTCGACGTCGGCATGGCCTCGGCGGGCGGGCTGATTGCCGTGGTCATAGCCAACATCG
CGGCGATCATCCTGATCCGGATGATCGGCAAAAACCTCACCGACAAGTCATGA

Upstream 100 bases:

>100_bases
CCCGAAAAAGTAACCGTCACGCATCAGGGCGAAAGCCAATGCTCTCGCCCTGCCGCTCAACTGCGCAACAACTCTGGTGC
AATCCGGTTCGGAGCTCCCC

Downstream 100 bases:

>100_bases
GGACCTTGCCATGATGACCCTCAAACAATCACGCCGTCTGCAAAGCCTGCTGCTCGGGGCCCTGTCCTGGATCATCGCTG
CGCTGGTGTTCTTTCCGATC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNTSASPERTDLSGEQQPLKNRRFKPGWFLVSPSVALLLVWMIVPLGMTIYFSLIRYNLLSPGENEFVGLENFQYFVTDS
GFLPGAGNTLLLVGSVLAISVIFGVLISALLEASEFFGRGIVRVLLISPFFIMPTVSALIWKNLIFHPVSGVLAAVWKFF
GAEPIDWFAHYPMLSIIIIVSWQWLPFAILILMTAMQSLDQEQKEAARLDGAGPLAIFWHLTLPHLARPIAVVVMIETIF
LLSVFAEIFTTTNGGPGFASTNLAYLIYIQALLQFDVGMASAGGLIAVVIANIAAIILIRMIGKNLTDKS

Sequences:

>Translated_310_residues
MNTSASPERTDLSGEQQPLKNRRFKPGWFLVSPSVALLLVWMIVPLGMTIYFSLIRYNLLSPGENEFVGLENFQYFVTDS
GFLPGAGNTLLLVGSVLAISVIFGVLISALLEASEFFGRGIVRVLLISPFFIMPTVSALIWKNLIFHPVSGVLAAVWKFF
GAEPIDWFAHYPMLSIIIIVSWQWLPFAILILMTAMQSLDQEQKEAARLDGAGPLAIFWHLTLPHLARPIAVVVMIETIF
LLSVFAEIFTTTNGGPGFASTNLAYLIYIQALLQFDVGMASAGGLIAVVIANIAAIILIRMIGKNLTDKS
>Mature_310_residues
MNTSASPERTDLSGEQQPLKNRRFKPGWFLVSPSVALLLVWMIVPLGMTIYFSLIRYNLLSPGENEFVGLENFQYFVTDS
GFLPGAGNTLLLVGSVLAISVIFGVLISALLEASEFFGRGIVRVLLISPFFIMPTVSALIWKNLIFHPVSGVLAAVWKFF
GAEPIDWFAHYPMLSIIIIVSWQWLPFAILILMTAMQSLDQEQKEAARLDGAGPLAIFWHLTLPHLARPIAVVVMIETIF
LLSVFAEIFTTTNGGPGFASTNLAYLIYIQALLQFDVGMASAGGLIAVVIANIAAIILIRMIGKNLTDKS

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=303, Percent_Identity=24.7524752475248, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790465, Length=259, Percent_Identity=27.027027027027, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787570, Length=272, Percent_Identity=25, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34021; Mature: 34021

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSASPERTDLSGEQQPLKNRRFKPGWFLVSPSVALLLVWMIVPLGMTIYFSLIRYNLL
CCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPGENEFVGLENFQYFVTDSGFLPGAGNTLLLVGSVLAISVIFGVLISALLEASEFFGRG
CCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVRVLLISPFFIMPTVSALIWKNLIFHPVSGVLAAVWKFFGAEPIDWFAHYPMLSIIIIV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SWQWLPFAILILMTAMQSLDQEQKEAARLDGAGPLAIFWHLTLPHLARPIAVVVMIETIF
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHEEHHHHHHHHHHHHHHHHHHHH
LLSVFAEIFTTTNGGPGFASTNLAYLIYIQALLQFDVGMASAGGLIAVVIANIAAIILIR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MIGKNLTDKS
HHHCCCCCCC
>Mature Secondary Structure
MNTSASPERTDLSGEQQPLKNRRFKPGWFLVSPSVALLLVWMIVPLGMTIYFSLIRYNLL
CCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPGENEFVGLENFQYFVTDSGFLPGAGNTLLLVGSVLAISVIFGVLISALLEASEFFGRG
CCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVRVLLISPFFIMPTVSALIWKNLIFHPVSGVLAAVWKFFGAEPIDWFAHYPMLSIIIIV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SWQWLPFAILILMTAMQSLDQEQKEAARLDGAGPLAIFWHLTLPHLARPIAVVVMIETIF
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHEEHHHHHHHHHHHHHHHHHHHH
LLSVFAEIFTTTNGGPGFASTNLAYLIYIQALLQFDVGMASAGGLIAVVIANIAAIILIR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MIGKNLTDKS
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]