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The map label for this gene is ycjP [C]

Identifier: 66045674

GI number: 66045674

Start: 2823096

End: 2823929

Strand: Reverse

Name: ycjP [C]

Synonym: Psyr_2438

Alternate gene names: 66045674

Gene position: 2823929-2823096 (Counterclockwise)

Preceding gene: 66045675

Following gene: 66045673

Centisome position: 46.34

GC content: 58.63

Gene sequence:

>834_bases
ATGATGACCCTCAAACAATCACGCCGTCTGCAAAGCCTGCTGCTCGGGGCCCTGTCCTGGATCATCGCTGCGCTGGTGTT
CTTTCCGATCTTCTGGATGGTCCTGACCAGCTTCAAGACCGAGATCGATGCGTTCGCGACACCGCCACAGCTGTTCTTCA
CGCCGACGCTGGAAAACTACCTGCATATTCAGGAGCGCAGCGATTACTTCCATTTTGCCTGGAACTCGGTGCTGATTTCC
TTCAGCGCCACGGTGCTGGCCATGCTGATCGCGATTCCTGCGGCGTATTCCATGGCGTTTTTCGAGACCAAGCGCACCAA
GGGTACGCTGCTGTGGATGCTCTCGACCAAGATGCTGCCGCCGGTGGGCGTGCTGATGCCGATCTATCTGCTGGCCAAGA
CCTTTGGCCTGCTCGATTCGCGGCTGGCGCTGATCATCATCTATACGCTGATCAACCTGCCGATCGTGGTCTGGATGATT
TACACCTACTTCAAGGATATCCCCGGCGAGATCCTCGAGGCCTCACGGCTGGACGGGGCCAGTACCCGTCAGGAGATCTT
TCGCGTGCTGATGCCGATCTGCAAGGGCGGCCTGGCTTCCACCGCGTTGCTGTCGCTGATCCTGTGCTGGAACGAAGCGT
TCTGGTCGCTGAACCTCACCTCGTCCGCCGCGGCGCCGTTGACTGCCTTGATCGCTTCCTACTCCAGCCCTGAAGGGTTG
TTCTGGGCCAAGCTGTCAGCGGTCTCGACCCTGGCCTGTGCACCCATTCTGATTTTCGGCTGGATCAGTCAGAAACAACT
GGTTCGCGGCCTGTCGTTCGGCGCTGTGAAATAG

Upstream 100 bases:

>100_bases
GCGGGCGGGCTGATTGCCGTGGTCATAGCCAACATCGCGGCGATCATCCTGATCCGGATGATCGGCAAAAACCTCACCGA
CAAGTCATGAGGACCTTGCC

Downstream 100 bases:

>100_bases
CCCGGCCTAAAGAACAAGAAGGAGTCCAACATGGCTAACCTGAGCATCCGCAATCTGCAAAAAGGCTTTGACGGTCACCA
GATCATCAAGGGTATCGACC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MMTLKQSRRLQSLLLGALSWIIAALVFFPIFWMVLTSFKTEIDAFATPPQLFFTPTLENYLHIQERSDYFHFAWNSVLIS
FSATVLAMLIAIPAAYSMAFFETKRTKGTLLWMLSTKMLPPVGVLMPIYLLAKTFGLLDSRLALIIIYTLINLPIVVWMI
YTYFKDIPGEILEASRLDGASTRQEIFRVLMPICKGGLASTALLSLILCWNEAFWSLNLTSSAAAPLTALIASYSSPEGL
FWAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK

Sequences:

>Translated_277_residues
MMTLKQSRRLQSLLLGALSWIIAALVFFPIFWMVLTSFKTEIDAFATPPQLFFTPTLENYLHIQERSDYFHFAWNSVLIS
FSATVLAMLIAIPAAYSMAFFETKRTKGTLLWMLSTKMLPPVGVLMPIYLLAKTFGLLDSRLALIIIYTLINLPIVVWMI
YTYFKDIPGEILEASRLDGASTRQEIFRVLMPICKGGLASTALLSLILCWNEAFWSLNLTSSAAAPLTALIASYSSPEGL
FWAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK
>Mature_277_residues
MMTLKQSRRLQSLLLGALSWIIAALVFFPIFWMVLTSFKTEIDAFATPPQLFFTPTLENYLHIQERSDYFHFAWNSVLIS
FSATVLAMLIAIPAAYSMAFFETKRTKGTLLWMLSTKMLPPVGVLMPIYLLAKTFGLLDSRLALIIIYTLINLPIVVWMI
YTYFKDIPGEILEASRLDGASTRQEIFRVLMPICKGGLASTALLSLILCWNEAFWSLNLTSSAAAPLTALIASYSSPEGL
FWAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=258, Percent_Identity=31.0077519379845, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1790464, Length=211, Percent_Identity=29.3838862559242, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789860, Length=266, Percent_Identity=22.5563909774436, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30913; Mature: 30913

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLKQSRRLQSLLLGALSWIIAALVFFPIFWMVLTSFKTEIDAFATPPQLFFTPTLENY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHH
LHIQERSDYFHFAWNSVLISFSATVLAMLIAIPAAYSMAFFETKRTKGTLLWMLSTKMLP
EEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCC
PVGVLMPIYLLAKTFGLLDSRLALIIIYTLINLPIVVWMIYTYFKDIPGEILEASRLDGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
STRQEIFRVLMPICKGGLASTALLSLILCWNEAFWSLNLTSSAAAPLTALIASYSSPEGL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCCH
FWAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MMTLKQSRRLQSLLLGALSWIIAALVFFPIFWMVLTSFKTEIDAFATPPQLFFTPTLENY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHH
LHIQERSDYFHFAWNSVLISFSATVLAMLIAIPAAYSMAFFETKRTKGTLLWMLSTKMLP
EEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCC
PVGVLMPIYLLAKTFGLLDSRLALIIIYTLINLPIVVWMIYTYFKDIPGEILEASRLDGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
STRQEIFRVLMPICKGGLASTALLSLILCWNEAFWSLNLTSSAAAPLTALIASYSSPEGL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCCH
FWAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]