| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is nudH [C]
Identifier: 66045666
GI number: 66045666
Start: 2812267
End: 2812665
Strand: Reverse
Name: nudH [C]
Synonym: Psyr_2430
Alternate gene names: 66045666
Gene position: 2812665-2812267 (Counterclockwise)
Preceding gene: 66045667
Following gene: 66045665
Centisome position: 46.16
GC content: 58.9
Gene sequence:
>399_bases ATGAAACAACGAGCGACAGTCATCTGCAAACGTGACGGCCAGGTCCTCTACGTGCGCAAACCGAAATCCCGCTGGGCGTT GCCCGGCGGCAAGATAGAAGCGGGTGAAACGCCCTTCCAGGCCGCAGTGCGTGAACTGTGCGAAGAAACCGGGCTTGCCG ACCTTGATCTTCTGTACCTCGATGTGTACGAGAAGGATCAGGTCGCCCATTACGTTTTCACCGCCCAGGTCCCAGCCTCC AGCGAGCCATCGCCGCAGAACGAAATCGCCGCCTGCAAATGGCTTGCGCCGCAGAAACTTGGTGACCTGAAAGCCAGCAG TGCGACCAAGACCATCGTCCAGTCATATGCCAACGAGTCCGAAGACGTCGCCGGTTCCCGGAGCCACGTCACAGTGTAA
Upstream 100 bases:
>100_bases TATTACATTTTGGTGACTACCACTGACTATCTTTGAGTCTCAAGTTCACGCAGTCCTTGCAGATACTCATGTCAACGGAC GTTTAACAGGTGAATGGATT
Downstream 100 bases:
>100_bases TCGGGACAATAAGGTTGAACGGTATGGCCTGATTCTGTTCTGAGACAGCAGACGGTTCATTACTTTCTTCCCCGTCTCAG GAGACCCCTATGACTCAGAC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; NUDIX Family Hydrolase; NTP Pyrophosphohydrolase; Hydrolaso; MutT/NUDIX Family Hydrolase
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYLDVYEKDQVAHYVFTAQVPAS SEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANESEDVAGSRSHVTV
Sequences:
>Translated_132_residues MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYLDVYEKDQVAHYVFTAQVPAS SEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANESEDVAGSRSHVTV >Mature_132_residues MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYLDVYEKDQVAHYVFTAQVPAS SEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANESEDVAGSRSHVTV
Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 14466; Mature: 14466
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYL CCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE DVYEKDQVAHYVFTAQVPASSEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANES EECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCC EDVAGSRSHVTV CCCCCCCCCCCC >Mature Secondary Structure MKQRATVICKRDGQVLYVRKPKSRWALPGGKIEAGETPFQAAVRELCEETGLADLDLLYL CCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE DVYEKDQVAHYVFTAQVPASSEPSPQNEIAACKWLAPQKLGDLKASSATKTIVQSYANES EECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCC EDVAGSRSHVTV CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA