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The map label for this gene is araH [H]

Identifier: 66045609

GI number: 66045609

Start: 2751900

End: 2752889

Strand: Direct

Name: araH [H]

Synonym: Psyr_2373

Alternate gene names: 66045609

Gene position: 2751900-2752889 (Clockwise)

Preceding gene: 66045608

Following gene: 66045614

Centisome position: 45.16

GC content: 58.99

Gene sequence:

>990_bases
ATGAACAATAAAAAAGAGGTGCGTATGTCTACCGAATCCAGCCTGCAGGCTCCCCGTCAGGGCATGAACCTGCGTCGTTT
CGCCGATGACTGGGTGATGCTCCTGGCCGCCGTGGGGATTTTCCTGCTGTGTGCCGTGTTCATCGATAACTTCATGTCGC
CGCTGAACATGCGCGGTCTGGGCCTGGCGATTTCCACTGTAGGTATCGCTGCCTGCACCATGCTCTTTTGCCTGGCGTCC
GGGCACTTCGACCTCTCGGTCGGTTCGGTGCTGGCTTGTTCCGGGGTGATCGCCAGTATCGTCATCCGCGACACCGACAG
CGTATTTCTGGGTGTCTCGGCAGCCCTGGCGCTCGGGTTGGTCGTGGGTCTGATCAACGGCATTGTGATCGCCAAGCTGC
GCATCAATGCCCTGATCACGACTCTGGCAACCATGCAGATCGTGCGCGGCCTGGCGTACATTTTCTCCAACGGCAAGGCC
GTCGGCGTTTCCAACGAGGACTTCTTCATCTTTGGCAATGGCCAGGTGTATGGCGTGCCGGTGCCGATCCTGATCACCAT
TGCCTGCTTCATATTCTTCGGCTGGCTGCTCAACTACACCACCTATGGGCGCAACACCATGGCCATCGGCGGCAACCAGG
AAGCCGCGCTGCTGGCGGGTGTCCACGTGGACCGCACCAAGATCATCATTTTCGCCGTCCACGGCCTGGTCGGTGCATTG
GCTGGCGTAGTCCTGGCTTCGCGCATGACTTCGGGGCAACCGATGATCGGGCAGGGCTTCGAGCTGACGATCATCTCTGC
CTGCGTATTGGGCGGGGTTTCGCTGAGTGGCGGCATCGGCATGATCCGGCATGTGATCGCCGGGGTGCTGATTCTTGCAA
TCATCGAGAATGCGATGAACCTGAAGAACATCGATACGTTCTACCAGTATGTGATTCGCGGCACGATCCTGTTGCTGGCG
GTGATCATCGACCGCATGAAGCGCCGCTGA

Upstream 100 bases:

>100_bases
GGCGCAATCACCGGTGAACTCAATCGCGACGAGGCTGACGAGTCGCGACTCCTGCAATTGGCTCTGCCTCGCACGCGCGG
CTGACAATCGGTCCCTGACC

Downstream 100 bases:

>100_bases
CCGGCCAGCGCAGTTAAAGAGCCCTTGTCTATGTATGGCAGGGGCTTTTTATTGCGGGTCAAACCGGCCGACTGCGGAAG
TCGAGTCCTGCCCGGGTGCC

Product: L-arabinose transporter permease protein

Products: ADP; phosphate; arabinose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNNKKEVRMSTESSLQAPRQGMNLRRFADDWVMLLAAVGIFLLCAVFIDNFMSPLNMRGLGLAISTVGIAACTMLFCLAS
GHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLINGIVIAKLRINALITTLATMQIVRGLAYIFSNGKA
VGVSNEDFFIFGNGQVYGVPVPILITIACFIFFGWLLNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGAL
AGVVLASRMTSGQPMIGQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGTILLLA
VIIDRMKRR

Sequences:

>Translated_329_residues
MNNKKEVRMSTESSLQAPRQGMNLRRFADDWVMLLAAVGIFLLCAVFIDNFMSPLNMRGLGLAISTVGIAACTMLFCLAS
GHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLINGIVIAKLRINALITTLATMQIVRGLAYIFSNGKA
VGVSNEDFFIFGNGQVYGVPVPILITIACFIFFGWLLNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGAL
AGVVLASRMTSGQPMIGQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGTILLLA
VIIDRMKRR
>Mature_329_residues
MNNKKEVRMSTESSLQAPRQGMNLRRFADDWVMLLAAVGIFLLCAVFIDNFMSPLNMRGLGLAISTVGIAACTMLFCLAS
GHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLINGIVIAKLRINALITTLATMQIVRGLAYIFSNGKA
VGVSNEDFFIFGNGQVYGVPVPILITIACFIFFGWLLNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGAL
AGVVLASRMTSGQPMIGQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGTILLLA
VIIDRMKRR

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693152, Length=319, Percent_Identity=61.7554858934169, Blast_Score=377, Evalue=1e-106,
Organism=Escherichia coli, GI1790191, Length=312, Percent_Identity=35.8974358974359, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1789992, Length=397, Percent_Identity=31.2342569269521, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1788896, Length=319, Percent_Identity=31.6614420062696, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1790524, Length=324, Percent_Identity=29.0123456790123, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI87082395, Length=269, Percent_Identity=31.9702602230483, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1787793, Length=243, Percent_Identity=32.5102880658436, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787794, Length=309, Percent_Identity=29.126213592233, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788471, Length=312, Percent_Identity=32.3717948717949, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI145693214, Length=215, Percent_Identity=33.0232558139535, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34978; Mature: 34978

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKKEVRMSTESSLQAPRQGMNLRRFADDWVMLLAAVGIFLLCAVFIDNFMSPLNMRGL
CCCCHHEEECCHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GLAISTVGIAACTMLFCLASGHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHH
VVGLINGIVIAKLRINALITTLATMQIVRGLAYIFSNGKAVGVSNEDFFIFGNGQVYGVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEEECC
VPILITIACFIFFGWLLNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGAL
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCEEEEHHHHHHHHHH
AGVVLASRMTSGQPMIGQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMN
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LKNIDTFYQYVIRGTILLLAVIIDRMKRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNKKEVRMSTESSLQAPRQGMNLRRFADDWVMLLAAVGIFLLCAVFIDNFMSPLNMRGL
CCCCHHEEECCHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GLAISTVGIAACTMLFCLASGHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHH
VVGLINGIVIAKLRINALITTLATMQIVRGLAYIFSNGKAVGVSNEDFFIFGNGQVYGVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEEECC
VPILITIACFIFFGWLLNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGAL
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCEEEEHHHHHHHHHH
AGVVLASRMTSGQPMIGQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMN
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LKNIDTFYQYVIRGTILLLAVIIDRMKRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; arabinose [Periplasm]; H2O [C]

Specific reaction: ATP + arabinose [Periplasm] + H2O = ADP + phosphate + arabinose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2445996; 9097040; 9278503; 8045430 [H]