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The map label for this gene is 66045540

Identifier: 66045540

GI number: 66045540

Start: 2673444

End: 2674412

Strand: Reverse

Name: 66045540

Synonym: Psyr_2300

Alternate gene names: NA

Gene position: 2674412-2673444 (Counterclockwise)

Preceding gene: 66045541

Following gene: 66045539

Centisome position: 43.89

GC content: 63.47

Gene sequence:

>969_bases
GTGAGCGGCTCGCTGTTGCTGTCCGGATGGCGCTATCGGACAGTGCTTCTGTCGATCGTCGTCTCGGCCATGGGGTATCT
GGGTTTCTCGCTGTGGGGCGGCTGGCAGGCGGTCAGCGCAGCCACGGGCAAGGTCGGGCTGCTCGGCATCAGCGTGGCGT
TGTTGATGTCTGCAATCAACTACGCGCTGCGCTTCGTCCGCTGGCAACTCTACCTTTCAGTGTTGGGGCATCCGTTGGCC
TGGCGAAAAAGCCTGCGGATCTATCTGGCTGGCTTCGCCCTGACCACGACTCCCGGCAAGGCCGGTGAAGCGCTGCGTGG
CGTGTTGCTCAGGCCGCTGGGCGTGCCGTACCCGCAAAGCTTTGCCGCGTTTGTCAGCGAGCGTCTTTCCGATCTGCTGG
CCATCGTACTGCTCACGCTGTTCGGCCTGTCGTGGTATCCGCAGGCGCAGCCAATGATCCTGCTCGGCCTGGCACTGGTT
CTGACGGGCTCGCTGGTGCTGTCTCGCCGTCACTTGCTGGAGCGTTTACAGGCTTCACTGCCCACAAAAAACACGCGCGT
CAGTAGCCTGTGGCAGCAGCTGTTCAACGTGCTGCTTGCGGCTCGCCAGTGCCTGCATGGCAACGTGCTGCTGACCGCCA
GCCTGCTCAGTCTGCTGGCCTGGAGCGCCGAGGCACTGGCGTTTTACTGGATGCTTGGCTGGATGGGCGCACAGATCCCG
CTGACCTTTGCCGTATTTACCTACGCACTGGCGATGCTCGCGGGAGCATTGAGCTTCATGCCGGGCGGGCTGGGCAGCGC
CGAAGCGGTGATGGTCGGGCTGCTGATGTTCAAGGGCATGCCGGGGGCGGATGCGGTGGCTGCCACAGTGCTGATACGTC
TGGCGACCCTGTGGTTTGCGGTGGCCATCGGCGCCGTGATGCTCTCGCGCTTTACCGGCGCGAAACCCGTACCGAATCCT
CAGTCTTGA

Upstream 100 bases:

>100_bases
TCGCACGCCAATCAACAAGCCTTTACGCGCCGGGCTTCTGGGCATGGATCATGTGGGTGATTCGCTCGATCCCGCAGCCG
TTGTTCAAAAGGCTCAACCT

Downstream 100 bases:

>100_bases
GGCCATAACTCAGACGCTCGACATTTTTGTTCACCTCACGGAGGAGCGGTTCAATGCCACTCGATTCGCGCACATCGATG
TGTATCCCCCTGTTTTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSGSLLLSGWRYRTVLLSIVVSAMGYLGFSLWGGWQAVSAATGKVGLLGISVALLMSAINYALRFVRWQLYLSVLGHPLA
WRKSLRIYLAGFALTTTPGKAGEALRGVLLRPLGVPYPQSFAAFVSERLSDLLAIVLLTLFGLSWYPQAQPMILLGLALV
LTGSLVLSRRHLLERLQASLPTKNTRVSSLWQQLFNVLLAARQCLHGNVLLTASLLSLLAWSAEALAFYWMLGWMGAQIP
LTFAVFTYALAMLAGALSFMPGGLGSAEAVMVGLLMFKGMPGADAVAATVLIRLATLWFAVAIGAVMLSRFTGAKPVPNP
QS

Sequences:

>Translated_322_residues
MSGSLLLSGWRYRTVLLSIVVSAMGYLGFSLWGGWQAVSAATGKVGLLGISVALLMSAINYALRFVRWQLYLSVLGHPLA
WRKSLRIYLAGFALTTTPGKAGEALRGVLLRPLGVPYPQSFAAFVSERLSDLLAIVLLTLFGLSWYPQAQPMILLGLALV
LTGSLVLSRRHLLERLQASLPTKNTRVSSLWQQLFNVLLAARQCLHGNVLLTASLLSLLAWSAEALAFYWMLGWMGAQIP
LTFAVFTYALAMLAGALSFMPGGLGSAEAVMVGLLMFKGMPGADAVAATVLIRLATLWFAVAIGAVMLSRFTGAKPVPNP
QS
>Mature_321_residues
SGSLLLSGWRYRTVLLSIVVSAMGYLGFSLWGGWQAVSAATGKVGLLGISVALLMSAINYALRFVRWQLYLSVLGHPLAW
RKSLRIYLAGFALTTTPGKAGEALRGVLLRPLGVPYPQSFAAFVSERLSDLLAIVLLTLFGLSWYPQAQPMILLGLALVL
TGSLVLSRRHLLERLQASLPTKNTRVSSLWQQLFNVLLAARQCLHGNVLLTASLLSLLAWSAEALAFYWMLGWMGAQIPL
TFAVFTYALAMLAGALSFMPGGLGSAEAVMVGLLMFKGMPGADAVAATVLIRLATLWFAVAIGAVMLSRFTGAKPVPNPQ
S

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 34585; Mature: 34454

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSLLLSGWRYRTVLLSIVVSAMGYLGFSLWGGWQAVSAATGKVGLLGISVALLMSAIN
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHH
YALRFVRWQLYLSVLGHPLAWRKSLRIYLAGFALTTTPGKAGEALRGVLLRPLGVPYPQS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHH
FAAFVSERLSDLLAIVLLTLFGLSWYPQAQPMILLGLALVLTGSLVLSRRHLLERLQASL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTKNTRVSSLWQQLFNVLLAARQCLHGNVLLTASLLSLLAWSAEALAFYWMLGWMGAQIP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LTFAVFTYALAMLAGALSFMPGGLGSAEAVMVGLLMFKGMPGADAVAATVLIRLATLWFA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VAIGAVMLSRFTGAKPVPNPQS
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SGSLLLSGWRYRTVLLSIVVSAMGYLGFSLWGGWQAVSAATGKVGLLGISVALLMSAIN
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHH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HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]