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The map label for this gene is dppC [H]

Identifier: 66045505

GI number: 66045505

Start: 2630343

End: 2631251

Strand: Reverse

Name: dppC [H]

Synonym: Psyr_2265

Alternate gene names: 66045505

Gene position: 2631251-2630343 (Counterclockwise)

Preceding gene: 66045506

Following gene: 66045504

Centisome position: 43.18

GC content: 63.81

Gene sequence:

>909_bases
ATGAGCACAACCACCTCATCGCCGCTGCTGATCAACGATTACCAGCCTCCGGCGCGCAGCGTCTGGCGCACGTTACGCAG
CAGCTTTGCGCATCGCGGCTTCGCCATCGGCGCGGTACTGCTGCTGATCATCCTGCTTGGCGCGCTGTTCGCGCCCTGGC
TGGCCCCCTACGACCCTTATGCGCAGGACGTGATGCTGCGCATGAAACCGCCGGTGTGGATGGCCAACGGCACCTGGGAC
TACGTGCTGGGCACCGACAAACTGGGCCGCGATTACCTGTCGCGCCTGCTCTACGGCGCACGCATCTCGTTGTTCATCGG
CTTCTCGGCCGCGCTGATCTCCGGGATCATCGGCACCATCATGGGCCTGTTGGCCGGCTACTTTGGCGGCAAGACCGATG
CGCTGATCAGCTACCTGATCACCACCCGCCTGGCGATGCCGGTGGTGATGATCGCGCTGGCCTCGGCATCCTTGATCGGT
GGCTCGCTGAAAGTGGTGATCGTGTTGCTTGGCTGCCTGCTCTGGGACCGCTTTGCCGTGGTGGTGCGCGCTGCCGTGCA
GCAGATTCGCGACGCTGAATACGTCGCCTCGGCCCAGGCCTTGGGTTGTTCGACGCTGCGCATTCTGGCCAGTGAAATCC
TGCCCAATCTGGTCGGTGCGCTGATCGTCGTCGCTACGCTGGAAATGGCTCACGCGATCCTCCTCGAGTCGGCGCTTTCG
TTTCTCGGGGTCGGCGTGCAGCCGCCCATTCCTTCATGGGGGCTGATGATCGCCGAGGGCAAACCGTACATGTTCTTTTC
CCCTTGGGTCATCGCCATCCCCGGCGTCGCCCTGATGGTGCTGGTGCTGGGCATCAACCTGGTCGGTGACGGCCTGCGCG
ACCTGATCCTGCACGACGGGCGCAACTGA

Upstream 100 bases:

>100_bases
TCGTGCTGTTGATCGCGGTGATCTACATCGTCCTCACCCTGCTGGCCGACGTGCTCAACGCACTGCTCGACCCGCGCATC
CGCGTGAAATAGGAGGCCCC

Downstream 100 bases:

>100_bases
CAGAGGAGATACGCACATGGCGCTGTTACATGTTGAAAACCTGCGCGTCGAGATTCCTCTCGGGCAAGACACGCTTCACG
CAGTGCGCGGCCTGGACTTT

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSTTTSSPLLINDYQPPARSVWRTLRSSFAHRGFAIGAVLLLIILLGALFAPWLAPYDPYAQDVMLRMKPPVWMANGTWD
YVLGTDKLGRDYLSRLLYGARISLFIGFSAALISGIIGTIMGLLAGYFGGKTDALISYLITTRLAMPVVMIALASASLIG
GSLKVVIVLLGCLLWDRFAVVVRAAVQQIRDAEYVASAQALGCSTLRILASEILPNLVGALIVVATLEMAHAILLESALS
FLGVGVQPPIPSWGLMIAEGKPYMFFSPWVIAIPGVALMVLVLGINLVGDGLRDLILHDGRN

Sequences:

>Translated_302_residues
MSTTTSSPLLINDYQPPARSVWRTLRSSFAHRGFAIGAVLLLIILLGALFAPWLAPYDPYAQDVMLRMKPPVWMANGTWD
YVLGTDKLGRDYLSRLLYGARISLFIGFSAALISGIIGTIMGLLAGYFGGKTDALISYLITTRLAMPVVMIALASASLIG
GSLKVVIVLLGCLLWDRFAVVVRAAVQQIRDAEYVASAQALGCSTLRILASEILPNLVGALIVVATLEMAHAILLESALS
FLGVGVQPPIPSWGLMIAEGKPYMFFSPWVIAIPGVALMVLVLGINLVGDGLRDLILHDGRN
>Mature_301_residues
STTTSSPLLINDYQPPARSVWRTLRSSFAHRGFAIGAVLLLIILLGALFAPWLAPYDPYAQDVMLRMKPPVWMANGTWDY
VLGTDKLGRDYLSRLLYGARISLFIGFSAALISGIIGTIMGLLAGYFGGKTDALISYLITTRLAMPVVMIALASASLIGG
SLKVVIVLLGCLLWDRFAVVVRAAVQQIRDAEYVASAQALGCSTLRILASEILPNLVGALIVVATLEMAHAILLESALSF
LGVGVQPPIPSWGLMIAEGKPYMFFSPWVIAIPGVALMVLVLGINLVGDGLRDLILHDGRN

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=279, Percent_Identity=36.2007168458781, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1789964, Length=278, Percent_Identity=38.4892086330935, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787760, Length=259, Percent_Identity=35.5212355212355, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787549, Length=288, Percent_Identity=33.3333333333333, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1787498, Length=299, Percent_Identity=33.7792642140468, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=32.3770491803279, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1788505, Length=212, Percent_Identity=30.6603773584906, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32411; Mature: 32280

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTTSSPLLINDYQPPARSVWRTLRSSFAHRGFAIGAVLLLIILLGALFAPWLAPYDPY
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
AQDVMLRMKPPVWMANGTWDYVLGTDKLGRDYLSRLLYGARISLFIGFSAALISGIIGTI
HHHHHHHCCCCEEEECCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLLAGYFGGKTDALISYLITTRLAMPVVMIALASASLIGGSLKVVIVLLGCLLWDRFAV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VVRAAVQQIRDAEYVASAQALGCSTLRILASEILPNLVGALIVVATLEMAHAILLESALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGVGVQPPIPSWGLMIAEGKPYMFFSPWVIAIPGVALMVLVLGINLVGDGLRDLILHDG
HHCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
RN
CC
>Mature Secondary Structure 
STTTSSPLLINDYQPPARSVWRTLRSSFAHRGFAIGAVLLLIILLGALFAPWLAPYDPY
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
AQDVMLRMKPPVWMANGTWDYVLGTDKLGRDYLSRLLYGARISLFIGFSAALISGIIGTI
HHHHHHHCCCCEEEECCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLLAGYFGGKTDALISYLITTRLAMPVVMIALASASLIGGSLKVVIVLLGCLLWDRFAV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VVRAAVQQIRDAEYVASAQALGCSTLRILASEILPNLVGALIVVATLEMAHAILLESALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGVGVQPPIPSWGLMIAEGKPYMFFSPWVIAIPGVALMVLVLGINLVGDGLRDLILHDG
HHCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
RN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]