| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is folD2
Identifier: 66045465
GI number: 66045465
Start: 2586853
End: 2587755
Strand: Reverse
Name: folD2
Synonym: Psyr_2225
Alternate gene names: 66045465
Gene position: 2587755-2586853 (Counterclockwise)
Preceding gene: 66045466
Following gene: 66045464
Centisome position: 42.47
GC content: 63.34
Gene sequence:
>903_bases ATGAGCGCACACATCATCGACGGCAAGGCCGCCGCCGCTCGCGTTCTGCAGCAGGTCAGACACGACGTGAACATCTTGAA GGCCGAAGGCATCGAACCGGCGCTGGCGGTCATTCTGGTCGGTAATGACGCGGCCAGTGAGGTCTACGTACGCAACAAGA TCCTGCGCGCCGGGGAAGCCGGCATTCGCTCGCTGGAGCACCGCCTGCCGGCCGACAGCAGCCAGGCACGCTTACTGGCG TTGATTGCCGAATTGAACGCCGACAACACGGTAAACGGCATTCTCCTGCAACTGCCCTTGCCCGCTCACATCGATGAAAA CCGCGTCCTGCAGGCTATCGACCCGGACAAGGACGTTGACGGTTTTCACAGTGAAAACGTCGGTGGCCTGAGCCAGGGGC GCAACGTACTGACGCCCTGCACCCCCAGCGGTTGCCTGCACTTGCTGGAAGAAACCTGCGGCGATCTGAGCGGCAAGCAT GCGGTGGTGATCGGTCGCTCCAACATCGTCGGCAAACCCATGGCGGCTCTGCTGCTGCAAGCGCATTGCTCGGTGACGGT GGTGCATTCGCGCAGTACCGACGCCAGGGCCTTGTGCCAGTTGGCCGACATCGTCGTGGCGGCGGTTGGCCGTCCGCGCC TTATCGATGCCAGCTGGCTCAAGCGCGGCGCGGTGGTGATCGACGTCGGCATCAACCGCATCGAGGACCATGGCCGCAGC CGCCTGGTGGGCGATGTCGATTTCGCCAGCGCCACCGAAGTCGCTTCTGCCATCACGCCCGTTCCCGGCGGAGTCGGCCC GATGACTATCGCCTTTCTGATGAAAAACACCGTGACTGCTGCCCGGCAGCAGGCCCACGCGCAACGCAGCCAACCGGAGG CCGTATGCCTTTCAACCTATTGA
Upstream 100 bases:
>100_bases CGGCGGGACGCAATAACGAAACCATAGCGCTGTCGCGGGCCGTCAAATACCACCTGGAGCACCGCGTGTTTCTCAACACG GATCGAACGGTGGTGTTCCG
Downstream 100 bases:
>100_bases AATACGGGCTCAGCTCGCAGTACCCGGTCGAGGTGGATCTGCCTGCGCCCAAGGAACTGAAGTCCTCCTACGACGTGGTG ATCATCGGCGGCGGCGGGCA
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSAHIIDGKAAAARVLQQVRHDVNILKAEGIEPALAVILVGNDAASEVYVRNKILRAGEAGIRSLEHRLPADSSQARLLA LIAELNADNTVNGILLQLPLPAHIDENRVLQAIDPDKDVDGFHSENVGGLSQGRNVLTPCTPSGCLHLLEETCGDLSGKH AVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDARALCQLADIVVAAVGRPRLIDASWLKRGAVVIDVGINRIEDHGRS RLVGDVDFASATEVASAITPVPGGVGPMTIAFLMKNTVTAARQQAHAQRSQPEAVCLSTY
Sequences:
>Translated_300_residues MSAHIIDGKAAAARVLQQVRHDVNILKAEGIEPALAVILVGNDAASEVYVRNKILRAGEAGIRSLEHRLPADSSQARLLA LIAELNADNTVNGILLQLPLPAHIDENRVLQAIDPDKDVDGFHSENVGGLSQGRNVLTPCTPSGCLHLLEETCGDLSGKH AVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDARALCQLADIVVAAVGRPRLIDASWLKRGAVVIDVGINRIEDHGRS RLVGDVDFASATEVASAITPVPGGVGPMTIAFLMKNTVTAARQQAHAQRSQPEAVCLSTY >Mature_299_residues SAHIIDGKAAAARVLQQVRHDVNILKAEGIEPALAVILVGNDAASEVYVRNKILRAGEAGIRSLEHRLPADSSQARLLAL IAELNADNTVNGILLQLPLPAHIDENRVLQAIDPDKDVDGFHSENVGGLSQGRNVLTPCTPSGCLHLLEETCGDLSGKHA VVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDARALCQLADIVVAAVGRPRLIDASWLKRGAVVIDVGINRIEDHGRSR LVGDVDFASATEVASAITPVPGGVGPMTIAFLMKNTVTAARQQAHAQRSQPEAVCLSTY
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=291, Percent_Identity=43.298969072165, Blast_Score=235, Evalue=4e-62, Organism=Homo sapiens, GI94721354, Length=296, Percent_Identity=47.2972972972973, Blast_Score=217, Evalue=1e-56, Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=44.4067796610169, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI36796743, Length=234, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=9e-17, Organism=Escherichia coli, GI1786741, Length=289, Percent_Identity=50.8650519031142, Blast_Score=264, Evalue=6e-72, Organism=Caenorhabditis elegans, GI17568735, Length=302, Percent_Identity=41.0596026490066, Blast_Score=224, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6319558, Length=288, Percent_Identity=44.0972222222222, Blast_Score=253, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6321643, Length=299, Percent_Identity=40.4682274247492, Blast_Score=223, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6322933, Length=295, Percent_Identity=25.7627118644068, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI17136818, Length=302, Percent_Identity=48.3443708609272, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI17136816, Length=302, Percent_Identity=48.3443708609272, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI62472483, Length=298, Percent_Identity=43.9597315436242, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI45551871, Length=298, Percent_Identity=43.9597315436242, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI24645718, Length=298, Percent_Identity=43.9597315436242, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI17137370, Length=298, Percent_Identity=43.9597315436242, Blast_Score=226, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD2_PSEU2 (Q4ZUA4)
Other databases:
- EMBL: CP000075 - RefSeq: YP_235306.1 - HSSP: P11586 - ProteinModelPortal: Q4ZUA4 - SMR: Q4ZUA4 - STRING: Q4ZUA4 - GeneID: 3367740 - GenomeReviews: CP000075_GR - KEGG: psb:Psyr_2225 - NMPDR: fig|205918.4.peg.2702 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: CLMMLRD - ProtClustDB: PRK14194 - BioCyc: PSYR205918:PSYR_2225-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 31674; Mature: 31543
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHIIDGKAAAARVLQQVRHDVNILKAEGIEPALAVILVGNDAASEVYVRNKILRAGEA CCCEEECCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHCHH GIRSLEHRLPADSSQARLLALIAELNADNTVNGILLQLPLPAHIDENRVLQAIDPDKDVD HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCC GFHSENVGGLSQGRNVLTPCTPSGCLHLLEETCGDLSGKHAVVIGRSNIVGKPMAALLLQ CCCCCCCCCHHCCCCEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH AHCSVTVVHSRSTDARALCQLADIVVAAVGRPRLIDASWLKRGAVVIDVGINRIEDHGRS HCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHCCCEEEEECCHHHHHCCCC RLVGDVDFASATEVASAITPVPGGVGPMTIAFLMKNTVTAARQQAHAQRSQPEAVCLSTY CEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure SAHIIDGKAAAARVLQQVRHDVNILKAEGIEPALAVILVGNDAASEVYVRNKILRAGEA CCEEECCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHCHH GIRSLEHRLPADSSQARLLALIAELNADNTVNGILLQLPLPAHIDENRVLQAIDPDKDVD HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCC GFHSENVGGLSQGRNVLTPCTPSGCLHLLEETCGDLSGKHAVVIGRSNIVGKPMAALLLQ CCCCCCCCCHHCCCCEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH AHCSVTVVHSRSTDARALCQLADIVVAAVGRPRLIDASWLKRGAVVIDVGINRIEDHGRS HCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHCCCEEEEECCHHHHHCCCC RLVGDVDFASATEVASAITPVPGGVGPMTIAFLMKNTVTAARQQAHAQRSQPEAVCLSTY CEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA