| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cysH [H]
Identifier: 66045318
GI number: 66045318
Start: 2423281
End: 2424015
Strand: Reverse
Name: cysH [H]
Synonym: Psyr_2078
Alternate gene names: 66045318
Gene position: 2424015-2423281 (Counterclockwise)
Preceding gene: 66045320
Following gene: 66045313
Centisome position: 39.78
GC content: 59.32
Gene sequence:
>735_bases ATGAGCCAACCTTTCGACGTCGCTGAACTGGCGACGACCTATGCGACCAAATCTGCACAAGACATTCTGAAACTGGCCTT CGAGCACTTCGGCGACGACCTGTGGATCTCTTTCAGCGGTGCCGAGGACGTGGTTCTGGTCGACATGGCCTGGAAGCTGA ACAAGAACGTCAAGGTCTTCAGCCTGGATACAGGGCGCCTGCATGCGCAAACCTATCGCTTCATCGAGCAGGTCCGCGAG CACTACAAGATCGAGATCGAGATCGTTTCGCCCGATCACAGCAAGCTTGAACCTTTCGTCAAGGAAAAGGGCCTGTTCAG CTTTTACCGGGACGGCCATGGCGAATGCTGCGGCATCCGCAAGATCGAGCCGCTGCGTCGCAAACTGTCTGGCGTCAGCG CCTGGGCAACCGGCCAGCGCCGTGATCAGAGCCCCGGCACCCGCAGCGCCGTTGCTGCAGTGGAAATCGACAGCGCTTTT TCGACAGCCGAGCGCACGCTGTACAAATTCAACCCGTTGGCACAAATGAGCAGCGAGGAAATCTGGGGCTACATCCGCAT GCTGGAGCTGCCCTACAACAGCCTGCACGAGCGCGGCTTCATCAGCATCGGCTGCGAACCCTGCACCCGCCCGGTATTGC CGAACCAGCACGAGCGCGAAGGTCGCTGGTGGTGGGAAGAAGCCACGCAGAAGGAATGCGGGCTGCATGCGGGCAATCTG ATAGTGCGCGACTAA
Upstream 100 bases:
>100_bases ACTCTAGCCGCTGGCAACGGCCACTGAACAGCGGATTTTGTTACCATTGCCGCCATCACGAGCGCTTAAGCGCCACTCTT GCATTTTAGGAAGCCGCCTG
Downstream 100 bases:
>100_bases TGTCGCGAGCGGCAAGCTTCAAGCTTCAAGCTTCAAGCTTCAAGTCAAAGCGCGTAGGGCTCTGGCTTGTAGCTTGTAGC TTGTAGCTTGTAGCTTGTAG
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSQPFDVAELATTYATKSAQDILKLAFEHFGDDLWISFSGAEDVVLVDMAWKLNKNVKVFSLDTGRLHAQTYRFIEQVRE HYKIEIEIVSPDHSKLEPFVKEKGLFSFYRDGHGECCGIRKIEPLRRKLSGVSAWATGQRRDQSPGTRSAVAAVEIDSAF STAERTLYKFNPLAQMSSEEIWGYIRMLELPYNSLHERGFISIGCEPCTRPVLPNQHEREGRWWWEEATQKECGLHAGNL IVRD
Sequences:
>Translated_244_residues MSQPFDVAELATTYATKSAQDILKLAFEHFGDDLWISFSGAEDVVLVDMAWKLNKNVKVFSLDTGRLHAQTYRFIEQVRE HYKIEIEIVSPDHSKLEPFVKEKGLFSFYRDGHGECCGIRKIEPLRRKLSGVSAWATGQRRDQSPGTRSAVAAVEIDSAF STAERTLYKFNPLAQMSSEEIWGYIRMLELPYNSLHERGFISIGCEPCTRPVLPNQHEREGRWWWEEATQKECGLHAGNL IVRD >Mature_243_residues SQPFDVAELATTYATKSAQDILKLAFEHFGDDLWISFSGAEDVVLVDMAWKLNKNVKVFSLDTGRLHAQTYRFIEQVREH YKIEIEIVSPDHSKLEPFVKEKGLFSFYRDGHGECCGIRKIEPLRRKLSGVSAWATGQRRDQSPGTRSAVAAVEIDSAFS TAERTLYKFNPLAQMSSEEIWGYIRMLELPYNSLHERGFISIGCEPCTRPVLPNQHEREGRWWWEEATQKECGLHAGNLI VRD
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=201, Percent_Identity=27.363184079602, Blast_Score=81, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6325425, Length=230, Percent_Identity=28.695652173913, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011798 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 27956; Mature: 27825
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPFDVAELATTYATKSAQDILKLAFEHFGDDLWISFSGAEDVVLVDMAWKLNKNVKVF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCEEEE SLDTGRLHAQTYRFIEQVREHYKIEIEIVSPDHSKLEPFVKEKGLFSFYRDGHGECCGIR EECCCCHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCEECCC KIEPLRRKLSGVSAWATGQRRDQSPGTRSAVAAVEIDSAFSTAERTLYKFNPLAQMSSEE CHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHCCHHH IWGYIRMLELPYNSLHERGFISIGCEPCTRPVLPNQHEREGRWWWEEATQKECGLHAGNL HHHHHHHEECCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE IVRD EEEC >Mature Secondary Structure SQPFDVAELATTYATKSAQDILKLAFEHFGDDLWISFSGAEDVVLVDMAWKLNKNVKVF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCEEEE SLDTGRLHAQTYRFIEQVREHYKIEIEIVSPDHSKLEPFVKEKGLFSFYRDGHGECCGIR EECCCCHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCEECCC KIEPLRRKLSGVSAWATGQRRDQSPGTRSAVAAVEIDSAFSTAERTLYKFNPLAQMSSEE CHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHCCHHH IWGYIRMLELPYNSLHERGFISIGCEPCTRPVLPNQHEREGRWWWEEATQKECGLHAGNL HHHHHHHEECCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE IVRD EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA