| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is braZ [H]
Identifier: 66045255
GI number: 66045255
Start: 2338610
End: 2339923
Strand: Direct
Name: braZ [H]
Synonym: Psyr_2015
Alternate gene names: 66045255
Gene position: 2338610-2339923 (Clockwise)
Preceding gene: 66045253
Following gene: 66045257
Centisome position: 38.38
GC content: 62.33
Gene sequence:
>1314_bases ATGAAAGTGTTGAAAGGCCAGGACATCCTGGCACTCGGTTTTATGACATTTGCCCTGTTCGTCGGGGCTGGCAACATCAT CTTTCCCCCCATAGTGGGTCTGCAGGCCGGGCCGCATGTATGGATGGCGGCGCTGGGCTTTCTGGTCACCGCGGTTGGCT TGCCGGTCATTACCGTGATCGCTCTGGCCAGGGTCGGGGGCGCGATGGATGCCCTGAGCAGTCCGATTGGCAAGATCGCC GGCGGGGCGCTCGCTGCCGTCTGCTACCTGGCGGTCGGCCCTTTGTTCGCCACTCCGCGTACCGCTACGGTCTCGTTCGA AGTCGGTCTGGCGCCGCTGACCGGCGACACCCCGATGGCATTGTTCCTCTACAGTCTGGTGTATTTTCTGGTGGTGTTCT GGGTTTCGCTGTACCCGGGGCGCTTGCTCGATACCGTCGGACGCTTTCTGGCGCCGCTCAAGATCATCGCGCTGGCGGTA TTGGGCATCGCGGCATTCGCCTTGCCGGCAGGCGGAATAGGGGAGGCGGAGCCCGCGTACGCCGTAGCACCGTTTTCCCA GGGCTTCATCAATGGTTACCTGACCATGGATACGCTGGGGGCGCTGGTCTTCGGTATCGTCATCGTCAACGCGATCCGCT CTCGCGGTGTCGAATCGCCCCGTCTGATCACGCGTTACGCGATCATTGCCGGGCTGATTGCCGGAGTCGGGCTGGCGCTG GTGTATGTCAGTCTGTTTCGCCTCGGTTCTGGCAGCCACGCCGTGGCGGCAGGTGCCAGCAACGGAGCGGCGGTTCTGCA TGCCTACGTACAGCACACCTTCGGTTCGCTGGGCAGCGGATTCCTGGCCGTGCTGATTTCCCTGGCGTGTCTGGTCACTG CAGTAGGCCTGACCTGTGCCTGCGCCGAATACTTTGCCAAGGTGCTGCCGCTGTCCTACAGAACGCTGGTGATCATCCTC GCTGTGTTCTCGTTGCTGGTGTCCAATCTCGGGTTGACCAAACTGATCCAGTTTTCGATTCCGGTGCTCACGGCGATTTA CCCGCCGTGCATCGTTCTGGTCGCGCTGAGCTTCTGCAAGGAGCTCTGGCAGAGCCAGGGACGCGTGGTGGCGCCTGTGA TGCTGGTTTCGCTGGTGTTCGGCCTGATCGATGCGCTGAAGGGCGCCGGTTTCGGCGACGCACTGCCCGATGTTCTGAGC CATCTGCCGCTGGGTGATCAGGGGCTTGCATGGCTGGTGCCCGCTGTTGTCACGCTGGCAGTTGCTGTGGTGGTAGACAG GGTCATGGGCAAGCGCAGCGAGGCGCTGGCTTGA
Upstream 100 bases:
>100_bases GTTTCGCAAGGTACTGCCACGTCTTACGCCGACGGGCTGCGTCTGCCCCATTCATGGGTGACGTCCCATCCCTTATTTCG ATTCCGTGTGGTCCCTCGTA
Downstream 100 bases:
>100_bases AGGCCGTGCTTTAGACGATTGCGCAGGAAAAAACGTGTTGCATGAAGAGGCCCGCTATAAGCGGGCCTCTTTAGTTCTGC GAGCGTCTCAGCCTTACTTG
Product: branched chain amino acid ABC transporter carrier protein
Products: L-leucine [Cytoplasm]; L-valine [Cytoplasm]; Na (I) [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: LIV-III [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQAGPHVWMAALGFLVTAVGLPVITVIALARVGGAMDALSSPIGKIA GGALAAVCYLAVGPLFATPRTATVSFEVGLAPLTGDTPMALFLYSLVYFLVVFWVSLYPGRLLDTVGRFLAPLKIIALAV LGIAAFALPAGGIGEAEPAYAVAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPRLITRYAIIAGLIAGVGLAL VYVSLFRLGSGSHAVAAGASNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCACAEYFAKVLPLSYRTLVIIL AVFSLLVSNLGLTKLIQFSIPVLTAIYPPCIVLVALSFCKELWQSQGRVVAPVMLVSLVFGLIDALKGAGFGDALPDVLS HLPLGDQGLAWLVPAVVTLAVAVVVDRVMGKRSEALA
Sequences:
>Translated_437_residues MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQAGPHVWMAALGFLVTAVGLPVITVIALARVGGAMDALSSPIGKIA GGALAAVCYLAVGPLFATPRTATVSFEVGLAPLTGDTPMALFLYSLVYFLVVFWVSLYPGRLLDTVGRFLAPLKIIALAV LGIAAFALPAGGIGEAEPAYAVAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPRLITRYAIIAGLIAGVGLAL VYVSLFRLGSGSHAVAAGASNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCACAEYFAKVLPLSYRTLVIIL AVFSLLVSNLGLTKLIQFSIPVLTAIYPPCIVLVALSFCKELWQSQGRVVAPVMLVSLVFGLIDALKGAGFGDALPDVLS HLPLGDQGLAWLVPAVVTLAVAVVVDRVMGKRSEALA >Mature_437_residues MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQAGPHVWMAALGFLVTAVGLPVITVIALARVGGAMDALSSPIGKIA GGALAAVCYLAVGPLFATPRTATVSFEVGLAPLTGDTPMALFLYSLVYFLVVFWVSLYPGRLLDTVGRFLAPLKIIALAV LGIAAFALPAGGIGEAEPAYAVAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPRLITRYAIIAGLIAGVGLAL VYVSLFRLGSGSHAVAAGASNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCACAEYFAKVLPLSYRTLVIIL AVFSLLVSNLGLTKLIQFSIPVLTAIYPPCIVLVALSFCKELWQSQGRVVAPVMLVSLVFGLIDALKGAGFGDALPDVLS HLPLGDQGLAWLVPAVVTLAVAVVVDRVMGKRSEALA
Specific function: Component of the LIV-III transport system for branched- chain amino acids. BraZ is specific for isoleucine and valine. The LIV-III transport system may be H(+)-coupled [H]
COG id: COG1114
COG function: function code E; Branched-chain amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the branched chain amino acid transporter family [H]
Homologues:
Organism=Escherichia coli, GI1786601, Length=429, Percent_Identity=68.0652680652681, Blast_Score=587, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004685 [H]
Pfam domain/function: PF05525 Branch_AA_trans [H]
EC number: NA
Molecular weight: Translated: 45063; Mature: 45063
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQAGPHVWMAALGFLVTAVGLPVITVI CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALARVGGAMDALSSPIGKIAGGALAAVCYLAVGPLFATPRTATVSFEVGLAPLTGDTPMA HHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHH LFLYSLVYFLVVFWVSLYPGRLLDTVGRFLAPLKIIALAVLGIAAFALPAGGIGEAEPAY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE AVAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPRLITRYAIIAGLIAGVGLAL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VYVSLFRLGSGSHAVAAGASNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCA HHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH CAEYFAKVLPLSYRTLVIILAVFSLLVSNLGLTKLIQFSIPVLTAIYPPCIVLVALSFCK HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELWQSQGRVVAPVMLVSLVFGLIDALKGAGFGDALPDVLSHLPLGDQGLAWLVPAVVTLA HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH VAVVVDRVMGKRSEALA HHHHHHHHHCCHHHCCC >Mature Secondary Structure MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQAGPHVWMAALGFLVTAVGLPVITVI CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALARVGGAMDALSSPIGKIAGGALAAVCYLAVGPLFATPRTATVSFEVGLAPLTGDTPMA HHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHH LFLYSLVYFLVVFWVSLYPGRLLDTVGRFLAPLKIIALAVLGIAAFALPAGGIGEAEPAY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE AVAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPRLITRYAIIAGLIAGVGLAL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VYVSLFRLGSGSHAVAAGASNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCA HHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH CAEYFAKVLPLSYRTLVIILAVFSLLVSNLGLTKLIQFSIPVLTAIYPPCIVLVALSFCK HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELWQSQGRVVAPVMLVSLVFGLIDALKGAGFGDALPDVLSHLPLGDQGLAWLVPAVVTLA HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH VAVVVDRVMGKRSEALA HHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-leucine [Periplasm]; L-valine [Periplasm]; Na (I) [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-leucine [Periplasm] = Na (I) [Cytoplasm] + L-leucine [Cytoplasm] Na (I) [Periplasm] + L-valine [Periplasm] = Na (I) [Cytoplasm] + L-valine [Cytoplasm] Na (I) [Periplasm] + L-iso-leucine [Periplasm] = Na (I) [Cytoplasm] + L-iso-leuci
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1900503; 10984043 [H]