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The map label for this gene is yiaD [H]

Identifier: 66045239

GI number: 66045239

Start: 2320206

End: 2321021

Strand: Direct

Name: yiaD [H]

Synonym: Psyr_1999

Alternate gene names: 66045239

Gene position: 2320206-2321021 (Clockwise)

Preceding gene: 66045238

Following gene: 66045240

Centisome position: 38.08

GC content: 60.17

Gene sequence:

>816_bases
ATGAAGCGTATTCCTCGTGTCCTGAGTGTGTGTCTGTTGCTGGGGTCGGCTGGCCTATACGGTTGTGCCGGTCACAAGGA
CAGTGGCCAGGCCTTGCAGCAGGCCAGCGCCGACTTCCAGAAGGTCAAGGAAGATACCGATGTGCTGCGCAGTGCGCCCA
AGGATGTCATTCGCGCGGGTGAATCACTGGCCCGCGCCGAGCGTCTGTCCAGTTATCTGGGAAGCGGTGCCGATGTCGCT
CACTACGCCTACCTCAGCAGCCGCTACAGCGAGATCGCGCGTGAGCACAGCAATCTGATGTTGAGCCAGGAGCGTCTGGC
GAAAATGGACATGGAGCGCCAGCGTATGCAGCTGGCACTGCGTGAAGCCAAGCTGGCCAGCGCCCAGCAGCAGGGCCGTT
GGCTGGAAGATCAGATTCTCAGCCTGGCCACCACCGAAACCGACCGCGGGCTGGTCATGACCTTGGGCGATGTGCTGTTC
GACGCCGGACATGCCGAGCTGAAAAACTCGGCCAGTCGCACCATTCTCAAGGTTGTGCAGTTTCTGCAGATCAACCCGCG
CCGAGTGGTCCGCATCGAGGGTTATACCGACAGCACGGGCGATCGTCAGGAAAACCTGAAGCTGTCGAAAGACCGGGCAC
AAGCCGTCGCTGACGTGCTGATGGACCTGGGCATCGATGAAAAACGTATCCATGTCGAAGGCTATGGGCAGGAGTTTCCT
GTGAATGCCAACACCTCCGAGCGGGGCCGCGCGCAAAACAGGCGTGTCGAGATCGTTTTCTCGGACGAAAAAGGTCAGCT
GGGCGCAGCTCGCTGA

Upstream 100 bases:

>100_bases
GCCTGGCCGAGGCGCGAGTGCTGACCCTCAAGAGCCAGGAGCAGATCAATCAGTTGAATACCCGCCTCAATCGCTTGCGC
AAGCAGCTGGGGGAGGCGCA

Downstream 100 bases:

>100_bases
TAAAAAGCCGGTAAAAAGCCCGACGCCGGAAACGGCCTCGGGCTTTTTTGTCTTTAATCACGTTGATTATGGCGTTTCTG
CCCGCGTTTATTTTCACTCA

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKRIPRVLSVCLLLGSAGLYGCAGHKDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVA
HYAYLSSRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTETDRGLVMTLGDVLF
DAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGIDEKRIHVEGYGQEFP
VNANTSERGRAQNRRVEIVFSDEKGQLGAAR

Sequences:

>Translated_271_residues
MKRIPRVLSVCLLLGSAGLYGCAGHKDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVA
HYAYLSSRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTETDRGLVMTLGDVLF
DAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGIDEKRIHVEGYGQEFP
VNANTSERGRAQNRRVEIVFSDEKGQLGAAR
>Mature_271_residues
MKRIPRVLSVCLLLGSAGLYGCAGHKDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAGESLARAERLSSYLGSGADVA
HYAYLSSRYSEIAREHSNLMLSQERLAKMDMERQRMQLALREAKLASAQQQGRWLEDQILSLATTETDRGLVMTLGDVLF
DAGHAELKNSASRTILKVVQFLQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGIDEKRIHVEGYGQEFP
VNANTSERGRAQNRRVEIVFSDEKGQLGAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential). Cell inner membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=105, Percent_Identity=41.9047619047619, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 30091; Mature: 30091

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIPRVLSVCLLLGSAGLYGCAGHKDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAG
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
ESLARAERLSSYLGSGADVAHYAYLSSRYSEIAREHSNLMLSQERLAKMDMERQRMQLAL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAKLASAQQQGRWLEDQILSLATTETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQ
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FLQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGIDEKRIHVEGYGQEFP
HHHCCCCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
VNANTSERGRAQNRRVEIVFSDEKGQLGAAR
CCCCCCHHCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKRIPRVLSVCLLLGSAGLYGCAGHKDSGQALQQASADFQKVKEDTDVLRSAPKDVIRAG
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
ESLARAERLSSYLGSGADVAHYAYLSSRYSEIAREHSNLMLSQERLAKMDMERQRMQLAL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAKLASAQQQGRWLEDQILSLATTETDRGLVMTLGDVLFDAGHAELKNSASRTILKVVQ
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FLQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGIDEKRIHVEGYGQEFP
HHHCCCCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
VNANTSERGRAQNRRVEIVFSDEKGQLGAAR
CCCCCCHHCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2180922 [H]