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The map label for this gene is yagI [H]

Identifier: 66045231

GI number: 66045231

Start: 2311978

End: 2312787

Strand: Direct

Name: yagI [H]

Synonym: Psyr_1991

Alternate gene names: 66045231

Gene position: 2311978-2312787 (Clockwise)

Preceding gene: 66045230

Following gene: 66045233

Centisome position: 37.94

GC content: 61.6

Gene sequence:

>810_bases
ATGCATAACGATTCGATCACTCCTGAAAAGACTATCGGCAAGGAATCCGTACCCACCGGGACCCAGACCTTGCTGCGCGG
GCTGGGGGTGGTGCAGGCGGTTGCCGGTGGCGCACGGGACCTCAAGGAGATCGCCCGGCTGATCGGCACCACGCGCAGTA
CCACGCACCGTCTGGCCAGTTGCCTGGTCGAGGAGCGTTACCTGCGCATCGTTCCTCAGGTGGGCTATCTGCTTGGGCCG
AAATTGATCGAGCTGGGGTTTCAGGCGCGTGAAGAAGTGCCCCTGGCGATGCTGGCCCGGCCGTATCTGGATCGCTTGTC
GGAGCTGACCGGCGATACCGTGCATCTGGCGGTGCGGGAAGGGGATGACGTGCTCTATCTGCACAAGAATCCCGGTCGCA
ATGGTCCGGAAATGCGTTCGCGGGTCGGGCATCGGATGCCGCTGGTGCGCACCGGTATCGGCAAGGCACTGCTGCTGGAC
AGTGCTCAGTCCGAGTGGCAACGGCTGTATGAAATCAGCATGCCGAGCACAGGCAGAAATCCGCTATGGCCTGCTCATGA
GCAGCAAACCTGGGAGCAGTTGAAGGCGCGGCGGGAGGAGTATGTACAAGGAGGGTATGCATTCGATCTGGAGGACAACG
AACCGTCGATCCGTTGTGTCGCAGCGCCGGTACGTGATGCCAGCAAACAGATCGTTGCCGGCATCAGTGTCGCCAGTACC
GTGCCCTACATGCCGCTGGAGAAGATGGCCGAGCTGGTTCCGCTGATCAAAACCATCGCGGCGGAACTCTCGGCCGATCT
CGGCGGCTGA

Upstream 100 bases:

>100_bases
GTGGAGCGTATCGAGCTCTGATGTCGACGCGTCTGGACACTGGCGGTGATAATGCCGCCCGTTTTCGATCCGAACCCTTT
TGATCCGAGCAAGGTTTTTC

Downstream 100 bases:

>100_bases
TCGGCAGTCGATCAGGCCTTCAGCGTGGCCATGTCGATCACGAAGCGGTACTTCACGTCACCGGCCAGCATGCGCTCGTA
GGCTTCGTTGATGTTGCGGA

Product: regulatory proteins, IclR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MHNDSITPEKTIGKESVPTGTQTLLRGLGVVQAVAGGARDLKEIARLIGTTRSTTHRLASCLVEERYLRIVPQVGYLLGP
KLIELGFQAREEVPLAMLARPYLDRLSELTGDTVHLAVREGDDVLYLHKNPGRNGPEMRSRVGHRMPLVRTGIGKALLLD
SAQSEWQRLYEISMPSTGRNPLWPAHEQQTWEQLKARREEYVQGGYAFDLEDNEPSIRCVAAPVRDASKQIVAGISVAST
VPYMPLEKMAELVPLIKTIAAELSADLGG

Sequences:

>Translated_269_residues
MHNDSITPEKTIGKESVPTGTQTLLRGLGVVQAVAGGARDLKEIARLIGTTRSTTHRLASCLVEERYLRIVPQVGYLLGP
KLIELGFQAREEVPLAMLARPYLDRLSELTGDTVHLAVREGDDVLYLHKNPGRNGPEMRSRVGHRMPLVRTGIGKALLLD
SAQSEWQRLYEISMPSTGRNPLWPAHEQQTWEQLKARREEYVQGGYAFDLEDNEPSIRCVAAPVRDASKQIVAGISVAST
VPYMPLEKMAELVPLIKTIAAELSADLGG
>Mature_269_residues
MHNDSITPEKTIGKESVPTGTQTLLRGLGVVQAVAGGARDLKEIARLIGTTRSTTHRLASCLVEERYLRIVPQVGYLLGP
KLIELGFQAREEVPLAMLARPYLDRLSELTGDTVHLAVREGDDVLYLHKNPGRNGPEMRSRVGHRMPLVRTGIGKALLLD
SAQSEWQRLYEISMPSTGRNPLWPAHEQQTWEQLKARREEYVQGGYAFDLEDNEPSIRCVAAPVRDASKQIVAGISVAST
VPYMPLEKMAELVPLIKTIAAELSADLGG

Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=266, Percent_Identity=31.203007518797, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1786468, Length=250, Percent_Identity=30.4, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789999, Length=261, Percent_Identity=27.9693486590038, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1788581, Length=218, Percent_Identity=30.2752293577982, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI87082359, Length=255, Percent_Identity=25.4901960784314, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786715, Length=252, Percent_Identity=25.7936507936508, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29639; Mature: 29639

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNDSITPEKTIGKESVPTGTQTLLRGLGVVQAVAGGARDLKEIARLIGTTRSTTHRLAS
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH
CLVEERYLRIVPQVGYLLGPKLIELGFQAREEVPLAMLARPYLDRLSELTGDTVHLAVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEC
GDDVLYLHKNPGRNGPEMRSRVGHRMPLVRTGIGKALLLDSAQSEWQRLYEISMPSTGRN
CCCEEEEECCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PLWPAHEQQTWEQLKARREEYVQGGYAFDLEDNEPSIRCVAAPVRDASKQIVAGISVAST
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHC
VPYMPLEKMAELVPLIKTIAAELSADLGG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHNDSITPEKTIGKESVPTGTQTLLRGLGVVQAVAGGARDLKEIARLIGTTRSTTHRLAS
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH
CLVEERYLRIVPQVGYLLGPKLIELGFQAREEVPLAMLARPYLDRLSELTGDTVHLAVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEC
GDDVLYLHKNPGRNGPEMRSRVGHRMPLVRTGIGKALLLDSAQSEWQRLYEISMPSTGRN
CCCEEEEECCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PLWPAHEQQTWEQLKARREEYVQGGYAFDLEDNEPSIRCVAAPVRDASKQIVAGISVAST
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHC
VPYMPLEKMAELVPLIKTIAAELSADLGG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]