| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045206
Identifier: 66045206
GI number: 66045206
Start: 2277546
End: 2278940
Strand: Reverse
Name: 66045206
Synonym: Psyr_1966
Alternate gene names: NA
Gene position: 2278940-2277546 (Counterclockwise)
Preceding gene: 66045208
Following gene: 66045205
Centisome position: 37.4
GC content: 61.43
Gene sequence:
>1395_bases ATGACAAGACCGCGTTGGAAAAAAGCTCTCTTCATCGGCCTGCCGCTGGCCCTGGCCATCAGTGCAGGTGCGGGCTTTCT GGCCTGGAATTACTGGTCGCCAGCAGGCTACCCGGTCAAGGTTATGCAACAGGCCGACGACCTGCAGGAGCGGATCATTT CCTTCGACAGCCACATCACCGTGCCGATGAAATTCGGCAGCGAGGGCAACGAAGCCGACAAGGACGGCTCGGGGCAATTC GACCTGGTGAAAGCCGCGCGCGGACGCCTGTCCGGGGCTGCACTGACGGTATTCGGCTGGCCGGAGATCTGGAACGGCGA CAACGCCCCGCATCGTCCGACACCCGGTTTCGTCGACGAAGCACGCCATCAGCAGGAAGTGCGTTACAAAATCATCACCG GCATGGTTCGCGACTTCCCCAATCAGGTCGGCATCGCCTACACCCCGGACGACATGCGCCGCCTGCACGGCGAAGGCAAG TTTGCGATCTTCATCAGCATGCTCAACGCTTACCCGCTGGGCAATGACCTGAGCCTGCTGGACCACTGGACCGCACGCGG CATGCGCATGTTCGGTTTCAGTTATGTCGGCAATAACAGCTGGGCCGACTCTTCACGTCCCCTGCCCTTTCTCAATGACA CGCCCGACGCACTGGGCGGCCTGTCGGAGATCGGCAGGCAGGCAGTGCAACGCCTCAACGATCTGGGCGTGATCATCGAC GTGTCACAGATGTCGAGCAAGGCGCTGCAACAGGTCAGCGAGCTGAGCCGCACGCCGATGGTCGCCTCGCACTCGACGCC GCGTGCGCTGGTGGACATCCCGCGCAACCTCAGCGACGAGGAACTGCAGCTCATCAAGCGCAGCGGCGGCGTGGTACAGA TCGTGGCGTTTCCGGCCTATTTGAAGCCGCTGAGCCAGAAGACCCAGGACAAGCTCAACGCGCTGCGCAAGGACTTCGAC CTGCCGCCGTTGCCGAACCTGGCCATGGCACTGATGCCCGGCGACCCGATCATCACCGTCTGGCCGGAACAACGCTTCGG CGCCTATGCCAGCAAGCTGTACGCGATTCTCGAGGAAGAGCCCAAAGCCACGGTCAAGGACTTCGTCGACGCCATCGATT ACACCGTCCGCAAAATCGGCATCGACCACGTCGGCATCAGCTCCGACTTCAATGATGGCGGCGGTGTGAAAGGCTTCAAT GATGTCAGCGAAATCCGCAACGTGACGGCCGAACTGATCGAGCGCGGCTATGCCGAAGCGGATATCACCAAGCTCTGGGG CGGCAATTTCCTGCGCGTCTGGGAGCAGGTTCAGGCTGCTGCTCGTCCGGATATGAAGCACATGAATCTCTCAAACGCCG CTACCCGACCCTCAGGCGCAGACGCTCATGACTGA
Upstream 100 bases:
>100_bases ATCCATGACCCCGCGCTAAATTTATCGGCGATCCGCTCGTTCTCCACCAGATAGCAACAGCCGTCGCAGGCTGCGCAACG GTTAACCACACGAGACGGAA
Downstream 100 bases:
>100_bases TCGCAGAACCTTCCTCAAACAGGCCGGGCTGCTCGCGGCAGCCCTGCCCCTGGGCTCCGGCCTTGCAACGGCAGCCGTGA CGCCAGCGACTCAGCCGGCC
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: ORF R [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MTRPRWKKALFIGLPLALAISAGAGFLAWNYWSPAGYPVKVMQQADDLQERIISFDSHITVPMKFGSEGNEADKDGSGQF DLVKAARGRLSGAALTVFGWPEIWNGDNAPHRPTPGFVDEARHQQEVRYKIITGMVRDFPNQVGIAYTPDDMRRLHGEGK FAIFISMLNAYPLGNDLSLLDHWTARGMRMFGFSYVGNNSWADSSRPLPFLNDTPDALGGLSEIGRQAVQRLNDLGVIID VSQMSSKALQQVSELSRTPMVASHSTPRALVDIPRNLSDEELQLIKRSGGVVQIVAFPAYLKPLSQKTQDKLNALRKDFD LPPLPNLAMALMPGDPIITVWPEQRFGAYASKLYAILEEEPKATVKDFVDAIDYTVRKIGIDHVGISSDFNDGGGVKGFN DVSEIRNVTAELIERGYAEADITKLWGGNFLRVWEQVQAAARPDMKHMNLSNAATRPSGADAHD
Sequences:
>Translated_464_residues MTRPRWKKALFIGLPLALAISAGAGFLAWNYWSPAGYPVKVMQQADDLQERIISFDSHITVPMKFGSEGNEADKDGSGQF DLVKAARGRLSGAALTVFGWPEIWNGDNAPHRPTPGFVDEARHQQEVRYKIITGMVRDFPNQVGIAYTPDDMRRLHGEGK FAIFISMLNAYPLGNDLSLLDHWTARGMRMFGFSYVGNNSWADSSRPLPFLNDTPDALGGLSEIGRQAVQRLNDLGVIID VSQMSSKALQQVSELSRTPMVASHSTPRALVDIPRNLSDEELQLIKRSGGVVQIVAFPAYLKPLSQKTQDKLNALRKDFD LPPLPNLAMALMPGDPIITVWPEQRFGAYASKLYAILEEEPKATVKDFVDAIDYTVRKIGIDHVGISSDFNDGGGVKGFN DVSEIRNVTAELIERGYAEADITKLWGGNFLRVWEQVQAAARPDMKHMNLSNAATRPSGADAHD >Mature_463_residues TRPRWKKALFIGLPLALAISAGAGFLAWNYWSPAGYPVKVMQQADDLQERIISFDSHITVPMKFGSEGNEADKDGSGQFD LVKAARGRLSGAALTVFGWPEIWNGDNAPHRPTPGFVDEARHQQEVRYKIITGMVRDFPNQVGIAYTPDDMRRLHGEGKF AIFISMLNAYPLGNDLSLLDHWTARGMRMFGFSYVGNNSWADSSRPLPFLNDTPDALGGLSEIGRQAVQRLNDLGVIIDV SQMSSKALQQVSELSRTPMVASHSTPRALVDIPRNLSDEELQLIKRSGGVVQIVAFPAYLKPLSQKTQDKLNALRKDFDL PPLPNLAMALMPGDPIITVWPEQRFGAYASKLYAILEEEPKATVKDFVDAIDYTVRKIGIDHVGISSDFNDGGGVKGFND VSEIRNVTAELIERGYAEADITKLWGGNFLRVWEQVQAAARPDMKHMNLSNAATRPSGADAHD
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=289, Percent_Identity=25.9515570934256, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI193211608, Length=285, Percent_Identity=25.9649122807018, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI193211610, Length=285, Percent_Identity=25.9649122807018, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI189458885, Length=175, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI4758190, Length=175, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=4e-16, Organism=Drosophila melanogaster, GI281362638, Length=181, Percent_Identity=29.2817679558011, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI281362636, Length=181, Percent_Identity=29.2817679558011, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI221475880, Length=234, Percent_Identity=24.3589743589744, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI161083233, Length=256, Percent_Identity=23.828125, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000180 - InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 51223; Mature: 51092
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPRWKKALFIGLPLALAISAGAGFLAWNYWSPAGYPVKVMQQADDLQERIISFDSHIT CCCCCHHHEEEECCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEE VPMKFGSEGNEADKDGSGQFDLVKAARGRLSGAALTVFGWPEIWNGDNAPHRPTPGFVDE EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHCCCCCCCCCCCCCHHHH ARHQQEVRYKIITGMVRDFPNQVGIAYTPDDMRRLHGEGKFAIFISMLNAYPLGNDLSLL HHHHHHHHHHHHHHHHHHCCHHCCCEECCHHHHHHHCCCCEEEEEEHHHCCCCCCCHHHH DHWTARGMRMFGFSYVGNNSWADSSRPLPFLNDTPDALGGLSEIGRQAVQRLNDLGVIID HHHHHCCCHHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE VSQMSSKALQQVSELSRTPMVASHSTPRALVDIPRNLSDEELQLIKRSGGVVQIVAFPAY HHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHCCCEEEEEECHHH LKPLSQKTQDKLNALRKDFDLPPLPNLAMALMPGDPIITVWPEQRFGAYASKLYAILEEE HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCC PKATVKDFVDAIDYTVRKIGIDHVGISSDFNDGGGVKGFNDVSEIRNVTAELIERGYAEA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH DITKLWGGNFLRVWEQVQAAARPDMKHMNLSNAATRPSGADAHD HHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRPRWKKALFIGLPLALAISAGAGFLAWNYWSPAGYPVKVMQQADDLQERIISFDSHIT CCCCHHHEEEECCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEE VPMKFGSEGNEADKDGSGQFDLVKAARGRLSGAALTVFGWPEIWNGDNAPHRPTPGFVDE EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHCCCCCCCCCCCCCHHHH ARHQQEVRYKIITGMVRDFPNQVGIAYTPDDMRRLHGEGKFAIFISMLNAYPLGNDLSLL HHHHHHHHHHHHHHHHHHCCHHCCCEECCHHHHHHHCCCCEEEEEEHHHCCCCCCCHHHH DHWTARGMRMFGFSYVGNNSWADSSRPLPFLNDTPDALGGLSEIGRQAVQRLNDLGVIID HHHHHCCCHHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE VSQMSSKALQQVSELSRTPMVASHSTPRALVDIPRNLSDEELQLIKRSGGVVQIVAFPAY HHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHCCCEEEEEECHHH LKPLSQKTQDKLNALRKDFDLPPLPNLAMALMPGDPIITVWPEQRFGAYASKLYAILEEE HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCC PKATVKDFVDAIDYTVRKIGIDHVGISSDFNDGGGVKGFNDVSEIRNVTAELIERGYAEA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH DITKLWGGNFLRVWEQVQAAARPDMKHMNLSNAATRPSGADAHD HHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536663 [H]