| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is zurA [H]
Identifier: 66045190
GI number: 66045190
Start: 2235206
End: 2235970
Strand: Reverse
Name: zurA [H]
Synonym: Psyr_1950
Alternate gene names: 66045190
Gene position: 2235970-2235206 (Counterclockwise)
Preceding gene: 66045191
Following gene: 66045189
Centisome position: 36.69
GC content: 63.92
Gene sequence:
>765_bases ATGACGGCTGCACAGCACCTCGACATCGTCAGCCAGGGGCCGGGCATCGAATTCAATCAGGTCAGCCTGACCCTCGGGCG CACCACGATTCTCGATCAGGTTCACTTCAATGTGCGCGCCGGCAGCGTACACGCACTGGTCGGCCCGAACGGCGGTGGCA AAAGTTCGCTGATCAAGACCCTGCTCGGGCAGACACCGCATCAAGGTCAGTTGAGCCTGCTGTGGCCTGCCGCTCCGGGG CTGATCGGCTATGTTCCACAGGCGCTGGAGTTCGACCGTGGCCTGCCGATGACCGTGGACGATTTCATGGCGGCCATGTG TCAGCGACGCCCGGCGTTTCTGGGCTTGTCGAAGCACTACGCGGCAGCGATTGGCGAGGCATTGGAACGGGTCGGCATGC AGGACAAGCGCAAACGGCGCATGGGCGCGCTTTCCGGTGGCGAACGGCAGCGCGTATTGCTGGCGCAGGGGCTGATTCCT GCGCCGCAATTGCTGGTGCTGGATGAGCCGATGTCGGCGCTGGATGAGGCGGGTATTCAGGTGTTTGAGCGGTTGTTGGG TGACTGGCGCCGAAGCGGAGTCACGGTCCTGTGGATCGAGCATGATCTGGATGCCGTCAGGCGTCTGGCCGATCAGGTCA CAGGGCTCAACCGACGCATCCTGTTCGATGAACCGGCCGCCACCGCGCTGACCCCGGAACGGCTGCTGACCCTGTTTTCC GCGCACCCGCGCACGATGGATAGCAGCGCCGGGAGGATCGCGTAA
Upstream 100 bases:
>100_bases TGTCGCACATTTCCTATGGCGAGTACACCGCCGACAAGTACGAAAAGGAAATGGCCGGCAACCTCGACACGGTGGTACGT GCCATTCAGGAGTCGGGCGC
Downstream 100 bases:
>100_bases TGGATTACGAAACCTTTCGCCTGTTCATTCAGGGTCTCGCCTCGTCCGGTTACCTGCCCGAGGCGCTGGCCTACGGTTTT GTGGTCAACGCCCTGCTCGC
Product: ABC transporter
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTAAQHLDIVSQGPGIEFNQVSLTLGRTTILDQVHFNVRAGSVHALVGPNGGGKSSLIKTLLGQTPHQGQLSLLWPAAPG LIGYVPQALEFDRGLPMTVDDFMAAMCQRRPAFLGLSKHYAAAIGEALERVGMQDKRKRRMGALSGGERQRVLLAQGLIP APQLLVLDEPMSALDEAGIQVFERLLGDWRRSGVTVLWIEHDLDAVRRLADQVTGLNRRILFDEPAATALTPERLLTLFS AHPRTMDSSAGRIA
Sequences:
>Translated_254_residues MTAAQHLDIVSQGPGIEFNQVSLTLGRTTILDQVHFNVRAGSVHALVGPNGGGKSSLIKTLLGQTPHQGQLSLLWPAAPG LIGYVPQALEFDRGLPMTVDDFMAAMCQRRPAFLGLSKHYAAAIGEALERVGMQDKRKRRMGALSGGERQRVLLAQGLIP APQLLVLDEPMSALDEAGIQVFERLLGDWRRSGVTVLWIEHDLDAVRRLADQVTGLNRRILFDEPAATALTPERLLTLFS AHPRTMDSSAGRIA >Mature_253_residues TAAQHLDIVSQGPGIEFNQVSLTLGRTTILDQVHFNVRAGSVHALVGPNGGGKSSLIKTLLGQTPHQGQLSLLWPAAPGL IGYVPQALEFDRGLPMTVDDFMAAMCQRRPAFLGLSKHYAAAIGEALERVGMQDKRKRRMGALSGGERQRVLLAQGLIPA PQLLVLDEPMSALDEAGIQVFERLLGDWRRSGVTVLWIEHDLDAVRRLADQVTGLNRRILFDEPAATALTPERLLTLFSA HPRTMDSSAGRIA
Specific function: Involved in a zinc uptake transport system (Probable) [H]
COG id: COG1121
COG function: function code P; ABC-type Mn/Zn transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1788165, Length=227, Percent_Identity=36.5638766519824, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=33.6538461538462, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1786398, Length=236, Percent_Identity=30.0847457627119, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87081834, Length=205, Percent_Identity=34.1463414634146, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87081791, Length=214, Percent_Identity=31.7757009345794, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1789891, Length=241, Percent_Identity=31.1203319502075, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790544, Length=255, Percent_Identity=24.7058823529412, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789873, Length=204, Percent_Identity=31.8627450980392, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787712, Length=210, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786563, Length=191, Percent_Identity=31.9371727748691, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786345, Length=212, Percent_Identity=32.5471698113208, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788761, Length=218, Percent_Identity=30.2752293577982, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790739, Length=245, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789593, Length=184, Percent_Identity=29.3478260869565, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787089, Length=234, Percent_Identity=27.3504273504274, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788053, Length=200, Percent_Identity=34, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788002, Length=246, Percent_Identity=28.4552845528455, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789672, Length=250, Percent_Identity=27.2, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786803, Length=210, Percent_Identity=28.0952380952381, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788506, Length=225, Percent_Identity=32.4444444444444, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI48995001, Length=232, Percent_Identity=28.0172413793103, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1786319, Length=227, Percent_Identity=26.8722466960352, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1789962, Length=198, Percent_Identity=29.7979797979798, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1790190, Length=216, Percent_Identity=26.3888888888889, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789864, Length=243, Percent_Identity=26.7489711934156, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI48994943, Length=209, Percent_Identity=28.2296650717703, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787758, Length=216, Percent_Identity=28.7037037037037, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787792, Length=198, Percent_Identity=28.2828282828283, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790467, Length=210, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788897, Length=197, Percent_Identity=27.4111675126904, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1788210, Length=213, Percent_Identity=24.8826291079812, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787041, Length=216, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1788450, Length=225, Percent_Identity=27.1111111111111, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787370, Length=192, Percent_Identity=28.125, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786975, Length=204, Percent_Identity=26.4705882352941, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI87082267, Length=202, Percent_Identity=27.7227722772277, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1789751, Length=166, Percent_Identity=33.1325301204819, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI145693107, Length=218, Percent_Identity=27.9816513761468, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115534520, Length=243, Percent_Identity=29.2181069958848, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71983516, Length=213, Percent_Identity=27.2300469483568, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71983510, Length=213, Percent_Identity=27.2300469483568, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71983523, Length=214, Percent_Identity=27.1028037383178, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24662800, Length=214, Percent_Identity=28.9719626168224, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85726357, Length=231, Percent_Identity=29.004329004329, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27580; Mature: 27449
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAQHLDIVSQGPGIEFNQVSLTLGRTTILDQVHFNVRAGSVHALVGPNGGGKSSLIKT CCCHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHH LLGQTPHQGQLSLLWPAAPGLIGYVPQALEFDRGLPMTVDDFMAAMCQRRPAFLGLSKHY HHCCCCCCCCEEEECCCCCCHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHH AAAIGEALERVGMQDKRKRRMGALSGGERQRVLLAQGLIPAPQLLVLDEPMSALDEAGIQ HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCEEEECCCHHHHHHHHHH VFERLLGDWRRSGVTVLWIEHDLDAVRRLADQVTGLNRRILFDEPAATALTPERLLTLFS HHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCHHCCHHHHHHHHH AHPRTMDSSAGRIA CCCCCCCCCCCCCC >Mature Secondary Structure TAAQHLDIVSQGPGIEFNQVSLTLGRTTILDQVHFNVRAGSVHALVGPNGGGKSSLIKT CCHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHH LLGQTPHQGQLSLLWPAAPGLIGYVPQALEFDRGLPMTVDDFMAAMCQRRPAFLGLSKHY HHCCCCCCCCEEEECCCCCCHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHH AAAIGEALERVGMQDKRKRRMGALSGGERQRVLLAQGLIPAPQLLVLDEPMSALDEAGIQ HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCEEEECCCHHHHHHHHHH VFERLLGDWRRSGVTVLWIEHDLDAVRRLADQVTGLNRRILFDEPAATALTPERLLTLFS HHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCHHCCHHHHHHHHH AHPRTMDSSAGRIA CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]