| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045182
Identifier: 66045182
GI number: 66045182
Start: 2215461
End: 2215985
Strand: Direct
Name: 66045182
Synonym: Psyr_1942
Alternate gene names: NA
Gene position: 2215461-2215985 (Clockwise)
Preceding gene: 66045177
Following gene: 66045184
Centisome position: 36.36
GC content: 59.24
Gene sequence:
>525_bases ATGAAAACGAAATTGACCGCCCTGGCCCTGTTGCTGGCTGTAAGTGCACCGATGGTTCACGCTGCTGCCGAGCCGTCCGG CTATACCTACCGCATGGTGGCCGAGACGCCAAGCAATGTGAACGACAAGGAGATCGCCGGTCTGTTTGATCGCTGGAACA AGGCCCTGCAAACCGGAAACTCCACTACCGTCGCATCGTTGTACGCGCCGGACGCTGTCCTGCAGCCTACGGTCTCCAAC AAAGTGCGTGCCACTCCGGCAGAGATCAAGGACTACTTCGACAAGTTCCTGGCACTCAAGCCGATTGGCGAGATCAACTA CCGGGAGATTCGTCGCCTGGGGCCTGATGCCGCAGCGGACAACGGTGTCTACACCTTCACGTTGACGGCGCCGGACGGCA AGAAGACCAAGGTGCAGGCACGTTATTCGTTCCTCTACCACCGCGTCGGCAACGAGTGGAAGATTCTCAACCACCACTCC TCGGCGATGCCGGAAGTGCAGCCCGAGTATCAGGTCAGCCGCTGA
Upstream 100 bases:
>100_bases GCATACACAGATAACCCCGGTTGGCCGATGGCGAGCCGTGGCGGGGAGGGCAAAGTGGCACTCACTGAATCCCTGAACAG ATCCCCGTAGGAGAGTAGCG
Downstream 100 bases:
>100_bases TCTGTCGCCTGCCAGGCTGAAAACAAAAATCCGGAGCCAGTGCTCCGGATTTTTTTTGCCTGTCTGAACCGCCCGCAATC AGGCTTCGGCCTGGGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Kinase; Protein With A Cystatin-Like Fold; Secreted Protein; Exported Protein
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKTKLTALALLLAVSAPMVHAAAEPSGYTYRMVAETPSNVNDKEIAGLFDRWNKALQTGNSTTVASLYAPDAVLQPTVSN KVRATPAEIKDYFDKFLALKPIGEINYREIRRLGPDAAADNGVYTFTLTAPDGKKTKVQARYSFLYHRVGNEWKILNHHS SAMPEVQPEYQVSR
Sequences:
>Translated_174_residues MKTKLTALALLLAVSAPMVHAAAEPSGYTYRMVAETPSNVNDKEIAGLFDRWNKALQTGNSTTVASLYAPDAVLQPTVSN KVRATPAEIKDYFDKFLALKPIGEINYREIRRLGPDAAADNGVYTFTLTAPDGKKTKVQARYSFLYHRVGNEWKILNHHS SAMPEVQPEYQVSR >Mature_174_residues MKTKLTALALLLAVSAPMVHAAAEPSGYTYRMVAETPSNVNDKEIAGLFDRWNKALQTGNSTTVASLYAPDAVLQPTVSN KVRATPAEIKDYFDKFLALKPIGEINYREIRRLGPDAAADNGVYTFTLTAPDGKKTKVQARYSFLYHRVGNEWKILNHHS SAMPEVQPEYQVSR
Specific function: Unknown
COG id: COG4875
COG function: function code S; Uncharacterized protein conserved in bacteria with a cystatin-like fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19301; Mature: 19301
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKLTALALLLAVSAPMVHAAAEPSGYTYRMVAETPSNVNDKEIAGLFDRWNKALQTGN CCCHHHHHHHHHHHHCCHHEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC STTVASLYAPDAVLQPTVSNKVRATPAEIKDYFDKFLALKPIGEINYREIRRLGPDAAAD CCEEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC NGVYTFTLTAPDGKKTKVQARYSFLYHRVGNEWKILNHHSSAMPEVQPEYQVSR CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTKLTALALLLAVSAPMVHAAAEPSGYTYRMVAETPSNVNDKEIAGLFDRWNKALQTGN CCCHHHHHHHHHHHHCCHHEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC STTVASLYAPDAVLQPTVSNKVRATPAEIKDYFDKFLALKPIGEINYREIRRLGPDAAAD CCEEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC NGVYTFTLTAPDGKKTKVQARYSFLYHRVGNEWKILNHHSSAMPEVQPEYQVSR CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA