| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045170
Identifier: 66045170
GI number: 66045170
Start: 2202390
End: 2203679
Strand: Reverse
Name: 66045170
Synonym: Psyr_1929
Alternate gene names: NA
Gene position: 2203679-2202390 (Counterclockwise)
Preceding gene: 66045172
Following gene: 66045161
Centisome position: 36.16
GC content: 41.01
Gene sequence:
>1290_bases ATGAAGGACCTGTTTCCCGGCCATTTTTCCAGTTCTGATCAAGACATTGAGAACCTATGGAAAGACTGTATCTTCGTCTT GGACGCCAACGTACTGCTGAGCCTTTATAGGTATTCAGATTCGACGCGATCAGAACTGTTCAAAGTCTTCGACACCATGT CTGACAGACTCTGGATCCCTCATCAGGTCGCACAGGAATACCTAACCAACCGATTACTAGTCATCAGCGAACAAGCTAAA TACTATGACGATGCAAGTAAGCGTATAGAAGGACTGAAGAAGCTTCTTGAAAACAGCAACCAACATCCTTTTGTTTCGTC TAAAACGCTGAATGCTGCGAGTAAAGTTTTTGAGCAGCTTACTAAAGAACTATCAGAAAACCGCCTTATACATGATAAAA GAATCACCAAGGACGAGATAAAAGACAAACTGGAAATTTTATTCTCATCAAATGTTGGGCCAGCTTATTCCAAAGATAGA CTTGAAGAAGTTTTGATAGCGGGCAAAACAAGATATGATGAAAAGACGCCACCTGGATTCAGTGATTCAAAAAAAGGTGG AGATTCTCAACTGTTCTCGGACCGGTGCAAACCTTACGGAGACTATATCGTTTGGCTACAAATGATGGATCACTCCAGAC TAGTCGAAAAATCAATAATCTTTGTTACCGGCGACGTAAAAGAGGATTGGTGGACTGTATTTCAAGGTAAAACAGTCGGT CCTCACCCATCATTGGTTCAAGAGTTTATCGATTCAACTGGATACTTATTTTATATGTATACCCCAGATAAATTTTTACA ACGAGCAAGCATTGATCTCGGAATTAACAATATAGAGCTAGAAAAGTCCGCTCAAGAAATAAGAGACTTACAAAAAGAAG ATGATTTACTACAAGTTATTTTCGATGAAACAATAAACTCTATTTGGCCTGAGGCCAAAGACTCAAAGCCGGATATATTC GGGCAGAGCAACACAAGAAAAAGAATTATCCGCCCACAATCGGACAGCTTACCTGAGCAGCCGGAGTTTCCTTGGTCTGA GACATCGTTTTCTAAAGACGGATACAAGAAATCAAATTCACATAATGCCCGTATGGGTGTCATGCATGAGCTGAAGAGAC TAACGGCTGAAAAGATCGAGCTTGAACACTTTGTGACCAGCAGCATGCGCGAGGGCTCGCTAAACAGCAGAGATTACTCA CTACTAATGATAAGACTGAAAAAAATCGAGAAAGAGATTCAACTCATGAGCGGCCAAGTTAACGATAACGACCCATACAG TGAAATATAG
Upstream 100 bases:
>100_bases ACCAGCAACGACCTGTTTTCAGAAAAAGCAGCTTTCACACCAAGCATATCATTATGATATCATAAACTCTACGCCCCATG ACTGCCAACAAGGATTTTTT
Downstream 100 bases:
>100_bases TTTCTAGCTTCTATGTCAGAGATAAACAGCGGTACCTGATTGGGACAGAATCCTAATGGCCACAACGCTAGAGCGCAGAG TGCGCAGAGTGCGCAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKDLFPGHFSSSDQDIENLWKDCIFVLDANVLLSLYRYSDSTRSELFKVFDTMSDRLWIPHQVAQEYLTNRLLVISEQAK YYDDASKRIEGLKKLLENSNQHPFVSSKTLNAASKVFEQLTKELSENRLIHDKRITKDEIKDKLEILFSSNVGPAYSKDR LEEVLIAGKTRYDEKTPPGFSDSKKGGDSQLFSDRCKPYGDYIVWLQMMDHSRLVEKSIIFVTGDVKEDWWTVFQGKTVG PHPSLVQEFIDSTGYLFYMYTPDKFLQRASIDLGINNIELEKSAQEIRDLQKEDDLLQVIFDETINSIWPEAKDSKPDIF GQSNTRKRIIRPQSDSLPEQPEFPWSETSFSKDGYKKSNSHNARMGVMHELKRLTAEKIELEHFVTSSMREGSLNSRDYS LLMIRLKKIEKEIQLMSGQVNDNDPYSEI
Sequences:
>Translated_429_residues MKDLFPGHFSSSDQDIENLWKDCIFVLDANVLLSLYRYSDSTRSELFKVFDTMSDRLWIPHQVAQEYLTNRLLVISEQAK YYDDASKRIEGLKKLLENSNQHPFVSSKTLNAASKVFEQLTKELSENRLIHDKRITKDEIKDKLEILFSSNVGPAYSKDR LEEVLIAGKTRYDEKTPPGFSDSKKGGDSQLFSDRCKPYGDYIVWLQMMDHSRLVEKSIIFVTGDVKEDWWTVFQGKTVG PHPSLVQEFIDSTGYLFYMYTPDKFLQRASIDLGINNIELEKSAQEIRDLQKEDDLLQVIFDETINSIWPEAKDSKPDIF GQSNTRKRIIRPQSDSLPEQPEFPWSETSFSKDGYKKSNSHNARMGVMHELKRLTAEKIELEHFVTSSMREGSLNSRDYS LLMIRLKKIEKEIQLMSGQVNDNDPYSEI >Mature_429_residues MKDLFPGHFSSSDQDIENLWKDCIFVLDANVLLSLYRYSDSTRSELFKVFDTMSDRLWIPHQVAQEYLTNRLLVISEQAK YYDDASKRIEGLKKLLENSNQHPFVSSKTLNAASKVFEQLTKELSENRLIHDKRITKDEIKDKLEILFSSNVGPAYSKDR LEEVLIAGKTRYDEKTPPGFSDSKKGGDSQLFSDRCKPYGDYIVWLQMMDHSRLVEKSIIFVTGDVKEDWWTVFQGKTVG PHPSLVQEFIDSTGYLFYMYTPDKFLQRASIDLGINNIELEKSAQEIRDLQKEDDLLQVIFDETINSIWPEAKDSKPDIF GQSNTRKRIIRPQSDSLPEQPEFPWSETSFSKDGYKKSNSHNARMGVMHELKRLTAEKIELEHFVTSSMREGSLNSRDYS LLMIRLKKIEKEIQLMSGQVNDNDPYSEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49753; Mature: 49753
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLFPGHFSSSDQDIENLWKDCIFVLDANVLLSLYRYSDSTRSELFKVFDTMSDRLWIP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC HQVAQEYLTNRLLVISEQAKYYDDASKRIEGLKKLLENSNQHPFVSSKTLNAASKVFEQL HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH TKELSENRLIHDKRITKDEIKDKLEILFSSNVGPAYSKDRLEEVLIAGKTRYDEKTPPGF HHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC SDSKKGGDSQLFSDRCKPYGDYIVWLQMMDHSRLVEKSIIFVTGDVKEDWWTVFQGKTVG CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCC PHPSLVQEFIDSTGYLFYMYTPDKFLQRASIDLGINNIELEKSAQEIRDLQKEDDLLQVI CCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH FDETINSIWPEAKDSKPDIFGQSNTRKRIIRPQSDSLPEQPEFPWSETSFSKDGYKKSNS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HNARMGVMHELKRLTAEKIELEHFVTSSMREGSLNSRDYSLLMIRLKKIEKEIQLMSGQV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC NDNDPYSEI CCCCCCCCC >Mature Secondary Structure MKDLFPGHFSSSDQDIENLWKDCIFVLDANVLLSLYRYSDSTRSELFKVFDTMSDRLWIP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC HQVAQEYLTNRLLVISEQAKYYDDASKRIEGLKKLLENSNQHPFVSSKTLNAASKVFEQL HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH TKELSENRLIHDKRITKDEIKDKLEILFSSNVGPAYSKDRLEEVLIAGKTRYDEKTPPGF HHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC SDSKKGGDSQLFSDRCKPYGDYIVWLQMMDHSRLVEKSIIFVTGDVKEDWWTVFQGKTVG CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCC PHPSLVQEFIDSTGYLFYMYTPDKFLQRASIDLGINNIELEKSAQEIRDLQKEDDLLQVI CCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH FDETINSIWPEAKDSKPDIFGQSNTRKRIIRPQSDSLPEQPEFPWSETSFSKDGYKKSNS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HNARMGVMHELKRLTAEKIELEHFVTSSMREGSLNSRDYSLLMIRLKKIEKEIQLMSGQV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC NDNDPYSEI CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA