| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is prpB [C]
Identifier: 66045161
GI number: 66045161
Start: 2193153
End: 2193968
Strand: Reverse
Name: prpB [C]
Synonym: Psyr_1920
Alternate gene names: 66045161
Gene position: 2193968-2193153 (Counterclockwise)
Preceding gene: 66045170
Following gene: 66045160
Centisome position: 36.0
GC content: 56.37
Gene sequence:
>816_bases ATGAACACCAGCCAGGCATTCAGAAAGTTACATGAACACGATGAGTTATTCGTCATGCCCAATGCTTGGTGTGAGGGAAG CGCGCGCCTCATTCAGCAGTTGGGCTACGCCAGCCTCGGCACCACCAGCGCGGGGATTGCCTATGCACAGGGCTACCGCG ATTCATCTCCCTCGATGGACAATGAAGATCGCTTTGCGGCGATTGAGCGCATCGTTCGGGCAGTGGACATACCCGTGACG GCAGACCTGGAGAACGGTCTGGCGAAAACACTGGGCAAGGTCGAGGAGCACTTCAGAAGAGCCCTGACCGTCGGCTGCGC CGGTGCGTCCATTGAGGATATATCCGACTATCATGACCCGGACACCCCGCTGTATTTCTCCATCGAAGAAGCGTGCGATC GGGTGCGCGCTGCCAGTGAGGCCGCCCACGCGCTCGATGCCGATTTCATCGTCACCGCCAGGACCGACTATCTGCTTGGA GCGCACGCGTATTCGTTGACCGAGGTTATTAAACGGCTGGTCGCGTTTGAAGAAGCTGGAGCCGATTGTCTGTTCGCACC CGGCGTGAAGTCGATCGAGGACCTTGAGGCGATTCAGAGAGCGATCAGCAAACCTCTCAACGTCCTGCCTGTTTTCGGTA TGACGATTGACAGACTCAGGACAGTCGGCGTTCGCCGGATCAGCCTGGGCAGTTCATTGTTTCGTAACGCCTACCGGCAG ATCTCCACTGTTTTACTTGGATTGGAAGAACCAGAGGGGCTGGATTTTCTACAATCGGGACTGAGTCTGAATCAGCTCGA TGAAGTGATGCGTTAG
Upstream 100 bases:
>100_bases GGGCTGCTTGTTGTCTGTTCAAACTTTTTTAAGCCCCTTCACTTTTTTTTAATCATGCGTGCTGCGAAGAGGACTATGCT TGGCCATTCAGGGAGGCGCC
Downstream 100 bases:
>100_bases CCAGGATCGAGTGTTTGCATGGAGCATACATGTGATATCCGATAGAAACCGAAATCCCGTTATTGGTCTCGAGAACGGCG TGACGATCAACCGTAGCTCC
Product: carboxyphosphonoenolpyruvate phosphonomutase-like protein
Products: Pyruvate; Succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNTSQAFRKLHEHDELFVMPNAWCEGSARLIQQLGYASLGTTSAGIAYAQGYRDSSPSMDNEDRFAAIERIVRAVDIPVT ADLENGLAKTLGKVEEHFRRALTVGCAGASIEDISDYHDPDTPLYFSIEEACDRVRAASEAAHALDADFIVTARTDYLLG AHAYSLTEVIKRLVAFEEAGADCLFAPGVKSIEDLEAIQRAISKPLNVLPVFGMTIDRLRTVGVRRISLGSSLFRNAYRQ ISTVLLGLEEPEGLDFLQSGLSLNQLDEVMR
Sequences:
>Translated_271_residues MNTSQAFRKLHEHDELFVMPNAWCEGSARLIQQLGYASLGTTSAGIAYAQGYRDSSPSMDNEDRFAAIERIVRAVDIPVT ADLENGLAKTLGKVEEHFRRALTVGCAGASIEDISDYHDPDTPLYFSIEEACDRVRAASEAAHALDADFIVTARTDYLLG AHAYSLTEVIKRLVAFEEAGADCLFAPGVKSIEDLEAIQRAISKPLNVLPVFGMTIDRLRTVGVRRISLGSSLFRNAYRQ ISTVLLGLEEPEGLDFLQSGLSLNQLDEVMR >Mature_271_residues MNTSQAFRKLHEHDELFVMPNAWCEGSARLIQQLGYASLGTTSAGIAYAQGYRDSSPSMDNEDRFAAIERIVRAVDIPVT ADLENGLAKTLGKVEEHFRRALTVGCAGASIEDISDYHDPDTPLYFSIEEACDRVRAASEAAHALDADFIVTARTDYLLG AHAYSLTEVIKRLVAFEEAGADCLFAPGVKSIEDLEAIQRAISKPLNVLPVFGMTIDRLRTVGVRRISLGSSLFRNAYRQ ISTVLLGLEEPEGLDFLQSGLSLNQLDEVMR
Specific function: Catalyzes The Formation Of Pyruvate And Succinate From 2-Methylisocitrate (By Similarity). [C]
COG id: COG2513
COG function: function code G; PEP phosphonomutase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786525, Length=247, Percent_Identity=27.9352226720648, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR015813 [H]
Pfam domain/function: NA
EC number: 4.1.3.30 [C]
Molecular weight: Translated: 29757; Mature: 29757
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSQAFRKLHEHDELFVMPNAWCEGSARLIQQLGYASLGTTSAGIAYAQGYRDSSPSMD CCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHCHHHHCCCCCCCCCCC NEDRFAAIERIVRAVDIPVTADLENGLAKTLGKVEEHFRRALTVGCAGASIEDISDYHDP CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC DTPLYFSIEEACDRVRAASEAAHALDADFIVTARTDYLLGAHAYSLTEVIKRLVAFEEAG CCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC ADCLFAPGVKSIEDLEAIQRAISKPLNVLPVFGMTIDRLRTVGVRRISLGSSLFRNAYRQ CCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISTVLLGLEEPEGLDFLQSGLSLNQLDEVMR HHHHHHCCCCCCCHHHHHHCCCHHHHHHHHC >Mature Secondary Structure MNTSQAFRKLHEHDELFVMPNAWCEGSARLIQQLGYASLGTTSAGIAYAQGYRDSSPSMD CCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHCHHHHCCCCCCCCCCC NEDRFAAIERIVRAVDIPVTADLENGLAKTLGKVEEHFRRALTVGCAGASIEDISDYHDP CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC DTPLYFSIEEACDRVRAASEAAHALDADFIVTARTDYLLGAHAYSLTEVIKRLVAFEEAG CCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC ADCLFAPGVKSIEDLEAIQRAISKPLNVLPVFGMTIDRLRTVGVRRISLGSSLFRNAYRQ CCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISTVLLGLEEPEGLDFLQSGLSLNQLDEVMR HHHHHHCCCCCCCHHHHHHCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: methylisocitrate [C]
Specific reaction: methylisocitrate <==> Pyruvate + Succinate [C]
General reaction: Elimination [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]