Click here to switch to the map view.

The map label for this gene is 66045168

Identifier: 66045168

GI number: 66045168

Start: 2200095

End: 2200541

Strand: Direct

Name: 66045168

Synonym: Psyr_1927

Alternate gene names: NA

Gene position: 2200095-2200541 (Clockwise)

Preceding gene: 66045167

Following gene: 66045169

Centisome position: 36.1

GC content: 53.91

Gene sequence:

>447_bases
ATGAATAACCATACTTTTTCTTCCGGTGATTTCGTGCATGTTCCCGCCAGTCTGGCCGTTGGCGAGGACGTGGGCACGCT
GTTACATGAAGGGGTCAGAACAACCACGCTGGACGCGTTCAGCAAAACAAGAAAGCACGAAGTTCATGTTGTCGACCTGC
CGTCCAGGTCGATAAGTATGACCTTCGGTGCGCTGCAGCCGCTGCAAGGGTCGGGCCTGCATCGGCATAACTATGAAACC
ATCATCTATATCATTTCAGGCACCGGTTTTTCGATGGTAGGAGAGACGCTCGTTGCCTGGACAGCTGGAGACGCCGTTTA
TATTCCCGTCTGGCGTTGGCACAAACACGTCAATACATCAGAGGACGCAGAGGTCACGTACATCGCCTGTGAAAATACAC
CTCTGCTGCAGGCGCTTGGCGTCGCGTTGCGGGAGGAAGCTTCCTGA

Upstream 100 bases:

>100_bases
CTGGTGATGGAAAAACCGACTCGTTTTGAAATAGTCCGGCACGCCGCCGTCATGATGATCAAGGCGCGACTTGAGTTTCT
CGATAAACTTTGAGGTGAGC

Downstream 100 bases:

>100_bases
ACGAAGCTCGGTATCCGTGCCGCGGAGGGGAGTCTGGACGTACCGAATTTTTCATCTGTAAATGAACGGTCAGAAAGATG
ATCGGCGCGCAGAAAATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Domain Protein

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MNNHTFSSGDFVHVPASLAVGEDVGTLLHEGVRTTTLDAFSKTRKHEVHVVDLPSRSISMTFGALQPLQGSGLHRHNYET
IIYIISGTGFSMVGETLVAWTAGDAVYIPVWRWHKHVNTSEDAEVTYIACENTPLLQALGVALREEAS

Sequences:

>Translated_148_residues
MNNHTFSSGDFVHVPASLAVGEDVGTLLHEGVRTTTLDAFSKTRKHEVHVVDLPSRSISMTFGALQPLQGSGLHRHNYET
IIYIISGTGFSMVGETLVAWTAGDAVYIPVWRWHKHVNTSEDAEVTYIACENTPLLQALGVALREEAS
>Mature_148_residues
MNNHTFSSGDFVHVPASLAVGEDVGTLLHEGVRTTTLDAFSKTRKHEVHVVDLPSRSISMTFGALQPLQGSGLHRHNYET
IIYIISGTGFSMVGETLVAWTAGDAVYIPVWRWHKHVNTSEDAEVTYIACENTPLLQALGVALREEAS

Specific function: Unknown

COG id: COG3435

COG function: function code Q; Gentisate 1,2-dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16188; Mature: 16188

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNHTFSSGDFVHVPASLAVGEDVGTLLHEGVRTTTLDAFSKTRKHEVHVVDLPSRSISM
CCCCCCCCCCEEEECCCEEECCHHHHHHHCCCCCEEHHHHHHCCCCEEEEEECCCCCEEE
TFGALQPLQGSGLHRHNYETIIYIISGTGFSMVGETLVAWTAGDAVYIPVWRWHKHVNTS
EECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHCCEEEEEECCCEEEEEEEEEECCCCCC
EDAEVTYIACENTPLLQALGVALREEAS
CCCEEEEEEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNHTFSSGDFVHVPASLAVGEDVGTLLHEGVRTTTLDAFSKTRKHEVHVVDLPSRSISM
CCCCCCCCCCEEEECCCEEECCHHHHHHHCCCCCEEHHHHHHCCCCEEEEEECCCCCEEE
TFGALQPLQGSGLHRHNYETIIYIISGTGFSMVGETLVAWTAGDAVYIPVWRWHKHVNTS
EECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHCCEEEEEECCCEEEEEEEEEECCCCCC
EDAEVTYIACENTPLLQALGVALREEAS
CCCEEEEEEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA