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The map label for this gene is vacJ [C]

Identifier: 66045151

GI number: 66045151

Start: 2184860

End: 2185561

Strand: Direct

Name: vacJ [C]

Synonym: Psyr_1910

Alternate gene names: 66045151

Gene position: 2184860-2185561 (Clockwise)

Preceding gene: 161486732

Following gene: 66045153

Centisome position: 35.85

GC content: 57.98

Gene sequence:

>702_bases
ATGCCCGTGACCGGTGCAGGCCTTATCAAACGTTTGCTGCAATTGTCCCTGTGTGCCGGCATCGCGCTGGTGCCGGTGGC
CGTGCAGGCCGCTGAAGATGATCCGTGGGAAGGCATCAACCGTCCCATTTTCAAATTCAACGATATCCTTGACGCTTACA
CGCTCAAGCCGTTGGCCAAGGGATATCAGTACATCGCACCGCAATTCGTCGAAGACGGTATCCATAACTTCTTCAGCAAC
ATCGGCGATGTCGGCAATCTGGCGAACAACGTGCTGCAAGCCAAGCCTGAAGCGGCTGGCGTCGACACTGCGCGTCTGAT
CGTCAACACCACCTTCGGCCTGCTGGGCTTCATCGACGTGGGCACCCGCATGGGCCTGCAACGCAATGATGAGGACTTCG
GTCAGACGCTGGGCTACTGGGGCGTGCCGAGCGGCCCGTTCGTGGTCATTCCGTTGCTGGGGCCAAGCACTGTACGTGAT
GCAATCGCCAAGTACCCGGACACCTACACCTCGCCCTACCGATACATCGATCACGTTCCGACCCGTAACACTGCACTGGG
CGTCAACCTGATCGATACGCGTGCCAGCCTGTTGTCTGCCGAGCGCATGGTCAGCGGTGATCGCTACACCTTCATTCGCA
ATGCCTACCTGCAGAACCGCGAGTTCAAGGTCAAGGACGGCAAGGTCGAAGACGATTTTTAA

Upstream 100 bases:

>100_bases
CCTGCCTTATTCTCGACAGAAGGCTTTATACTCCCTGTCCTAGCGTGTGGGGCGTAGCACCCGCGTCATTATTTCGATAT
CTCGATCAGGAGTGTCAGCT

Downstream 100 bases:

>100_bases
TCGCTACCTTGCATCGGCTTGAATCAATAAAGGCGACCCTGGGTCGCCTTTATTATTTTGTAAAAGTGTGAACCTGTTCC
GCCCGTTTTCACTTCATCGA

Product: VacJ-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MPVTGAGLIKRLLQLSLCAGIALVPVAVQAAEDDPWEGINRPIFKFNDILDAYTLKPLAKGYQYIAPQFVEDGIHNFFSN
IGDVGNLANNVLQAKPEAAGVDTARLIVNTTFGLLGFIDVGTRMGLQRNDEDFGQTLGYWGVPSGPFVVIPLLGPSTVRD
AIAKYPDTYTSPYRYIDHVPTRNTALGVNLIDTRASLLSAERMVSGDRYTFIRNAYLQNREFKVKDGKVEDDF

Sequences:

>Translated_233_residues
MPVTGAGLIKRLLQLSLCAGIALVPVAVQAAEDDPWEGINRPIFKFNDILDAYTLKPLAKGYQYIAPQFVEDGIHNFFSN
IGDVGNLANNVLQAKPEAAGVDTARLIVNTTFGLLGFIDVGTRMGLQRNDEDFGQTLGYWGVPSGPFVVIPLLGPSTVRD
AIAKYPDTYTSPYRYIDHVPTRNTALGVNLIDTRASLLSAERMVSGDRYTFIRNAYLQNREFKVKDGKVEDDF
>Mature_232_residues
PVTGAGLIKRLLQLSLCAGIALVPVAVQAAEDDPWEGINRPIFKFNDILDAYTLKPLAKGYQYIAPQFVEDGIHNFFSNI
GDVGNLANNVLQAKPEAAGVDTARLIVNTTFGLLGFIDVGTRMGLQRNDEDFGQTLGYWGVPSGPFVVIPLLGPSTVRDA
IAKYPDTYTSPYRYIDHVPTRNTALGVNLIDTRASLLSAERMVSGDRYTFIRNAYLQNREFKVKDGKVEDDF

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=208, Percent_Identity=33.1730769230769, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 25631; Mature: 25500

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTGAGLIKRLLQLSLCAGIALVPVAVQAAEDDPWEGINRPIFKFNDILDAYTLKPLAK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GYQYIAPQFVEDGIHNFFSNIGDVGNLANNVLQAKPEAAGVDTARLIVNTTFGLLGFIDV
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GTRMGLQRNDEDFGQTLGYWGVPSGPFVVIPLLGPSTVRDAIAKYPDTYTSPYRYIDHVP
HHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHCCC
TRNTALGVNLIDTRASLLSAERMVSGDRYTFIRNAYLQNREFKVKDGKVEDDF
CCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCC
>Mature Secondary Structure 
PVTGAGLIKRLLQLSLCAGIALVPVAVQAAEDDPWEGINRPIFKFNDILDAYTLKPLAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GYQYIAPQFVEDGIHNFFSNIGDVGNLANNVLQAKPEAAGVDTARLIVNTTFGLLGFIDV
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GTRMGLQRNDEDFGQTLGYWGVPSGPFVVIPLLGPSTVRDAIAKYPDTYTSPYRYIDHVP
HHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHCCC
TRNTALGVNLIDTRASLLSAERMVSGDRYTFIRNAYLQNREFKVKDGKVEDDF
CCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]