| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045127
Identifier: 66045127
GI number: 66045127
Start: 2154712
End: 2154969
Strand: Direct
Name: 66045127
Synonym: Psyr_1883
Alternate gene names: NA
Gene position: 2154712-2154969 (Clockwise)
Preceding gene: 66045123
Following gene: 66045128
Centisome position: 35.36
GC content: 52.33
Gene sequence:
>258_bases ATGTTTTCAAAACCCGATATTCAGCGAGTTCTTGAAACAGCCTTTCTGCCTTCAAAGTGCGAGTGCGTCGTAGCGCCAAA TGAAACCTTCTCGGTGAAGCTTCTCCACCCCGAGTCAGGTGATATCCAGCTCTACGTAACGGGGCTGTCCTTGTCCGAGG TAGACAGCAGCCGATCCATCGCACGGCTGGTGCTCTCGTTGAGAGAACAGAGAGATTTGATGGGGCAGATGAATTTGTCC CTGAGGCGGATGGCGTAA
Upstream 100 bases:
>100_bases CCCCCGCGCCGCGTGCGTCCGTTGCGCGGGTCGGAAACCTATTCGCCTGAAACTCGTCTACACTTCACATCACGATTTGG CCCCTTCCAGAGGACGCACC
Downstream 100 bases:
>100_bases GGACTGGGCTCGTATTTTGATTGCGGTTTTTTGATCGCATTCACGACGGCCTATCGTCTCCAGCAGGCTAATAGCGGGCA TTCGCCCATGCAGCGTCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MFSKPDIQRVLETAFLPSKCECVVAPNETFSVKLLHPESGDIQLYVTGLSLSEVDSSRSIARLVLSLREQRDLMGQMNLS LRRMA
Sequences:
>Translated_85_residues MFSKPDIQRVLETAFLPSKCECVVAPNETFSVKLLHPESGDIQLYVTGLSLSEVDSSRSIARLVLSLREQRDLMGQMNLS LRRMA >Mature_85_residues MFSKPDIQRVLETAFLPSKCECVVAPNETFSVKLLHPESGDIQLYVTGLSLSEVDSSRSIARLVLSLREQRDLMGQMNLS LRRMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9554; Mature: 9554
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKPDIQRVLETAFLPSKCECVVAPNETFSVKLLHPESGDIQLYVTGLSLSEVDSSRSI CCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCHHHCCCHHHH ARLVLSLREQRDLMGQMNLSLRRMA HHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure MFSKPDIQRVLETAFLPSKCECVVAPNETFSVKLLHPESGDIQLYVTGLSLSEVDSSRSI CCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCHHHCCCHHHH ARLVLSLREQRDLMGQMNLSLRRMA HHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA