| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045116
Identifier: 66045116
GI number: 66045116
Start: 2147502
End: 2147873
Strand: Reverse
Name: 66045116
Synonym: Psyr_1872
Alternate gene names: NA
Gene position: 2147873-2147502 (Counterclockwise)
Preceding gene: 66045118
Following gene: 66045106
Centisome position: 35.25
GC content: 58.87
Gene sequence:
>372_bases ATGCGCCAATGGATTGCTGTTTGTGCACTTGTCAGCAGTTTCGCAGCACACGCGGGGATGGTCGATCAGGCTGCAGCCGT GGCGGCGCTGAAGGAAGGCAAACTGGCGATGGATGTGCGTAGCCAGACCGACTATGACGCAGGCACGGTACTGAACGCGG TACGCGTCGATGATCGACGGCTGGTCAATCAGATGAAACAGGTGCTCACCGACCGCAATGCGGTGTTCGTGATTTTCAGC AGCACGGACAGCAAGGCCGACAAGGCCCAGGAAAAGCTCCGGGCTGCCGGCTACTTCAGCGTCATCAATGGCGGCAACTA TGAAGAGCTGCACAACGCGCTCTACGACATCACCGACGACCCCGCCGAATGA
Upstream 100 bases:
>100_bases ATCGTGCCTAACCTGAATCGATTGTTTGGTTGATCCACGCGCTTTCGATCAACGTTCATCTGTGCCACTCTTTCCCTTCG CACTGAGGGAGGTTGAATGT
Downstream 100 bases:
>100_bases ACAATGGCCAGGCAATTGAGCCCGGCCACTTCATGATGCGCAGACCCGCTGCGGATTACTGATGCTGCGTCTGGACCTGC ACGCGGGTTTTCACTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRQWIAVCALVSSFAAHAGMVDQAAAVAALKEGKLAMDVRSQTDYDAGTVLNAVRVDDRRLVNQMKQVLTDRNAVFVIFS STDSKADKAQEKLRAAGYFSVINGGNYEELHNALYDITDDPAE
Sequences:
>Translated_123_residues MRQWIAVCALVSSFAAHAGMVDQAAAVAALKEGKLAMDVRSQTDYDAGTVLNAVRVDDRRLVNQMKQVLTDRNAVFVIFS STDSKADKAQEKLRAAGYFSVINGGNYEELHNALYDITDDPAE >Mature_123_residues MRQWIAVCALVSSFAAHAGMVDQAAAVAALKEGKLAMDVRSQTDYDAGTVLNAVRVDDRRLVNQMKQVLTDRNAVFVIFS STDSKADKAQEKLRAAGYFSVINGGNYEELHNALYDITDDPAE
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13426; Mature: 13426
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQWIAVCALVSSFAAHAGMVDQAAAVAALKEGKLAMDVRSQTDYDAGTVLNAVRVDDRR CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHH LVNQMKQVLTDRNAVFVIFSSTDSKADKAQEKLRAAGYFSVINGGNYEELHNALYDITDD HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCC PAE CCC >Mature Secondary Structure MRQWIAVCALVSSFAAHAGMVDQAAAVAALKEGKLAMDVRSQTDYDAGTVLNAVRVDDRR CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHH LVNQMKQVLTDRNAVFVIFSSTDSKADKAQEKLRAAGYFSVINGGNYEELHNALYDITDD HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCC PAE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA