| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gufA [H]
Identifier: 66045106
GI number: 66045106
Start: 2138075
End: 2139001
Strand: Reverse
Name: gufA [H]
Synonym: Psyr_1862
Alternate gene names: 66045106
Gene position: 2139001-2138075 (Counterclockwise)
Preceding gene: 66045116
Following gene: 66045103
Centisome position: 35.1
GC content: 64.4
Gene sequence:
>927_bases ATGCCTACGCCCGCATCATCCCGAACGCCCTGGGCGGCCTGGTTAAACCAGCTTCAGGGCAGCCCGCTGGTAAGCCTGGG CTTCGCCCTCGCCCTGCTGATCGTCGTCGCCCTCGGTGGCATCAGCCTTTACAACGCCTTCTATGGCACCAGTCAGGTCA ACTTCAATCACGCCCTGCTGGGCGGTATCGCGGGTTTTCTGGCGACGGCGCTAGGCGCAGTGATGGCGGTTGCCCTGCGC AACGTCTCGCAACGCGCTCAGGACATCATGCTCGGGTTCGCTGCGGGGATGATGCTGGCGGCCAGTTCGTTCTCGCTGAT TCTTCCAGGCCTGGAAGCCGCCCGGGACATTACCGACAGCGGGCCGTGGGCAGCTGCGACGGTTGTCGCCGGCCTGGGGC TGGGGGTGCTGCTGATGCTGGGGCTGGACCGGTTCACCCCGCACGAACATGAAAGCGTAGGCCGCCAGGGGCCTCATTCG GATCGAATCAGTCGGGTCTGGCTGTTCGTGCTGGCGATCACCCTGCATAACCTGCCCGAGGGCATGGCGATTGGCGTCAG TTTCGCCAGCGGCGACATGAACGTCGGCCTGCCATTGACCACGGCCATCGCCATTCAGGACATTCCCGAAGGTCTGGCCA TTGCGCTGGCCCTGCGTGCGACCGGCCTGTCGGCCTTCAAGGCGATGCTGGTGGCCATCGGTTCCGGCCTCATGGAGCCG CTGGGCTCACTGGTGGGCCTGGGCATCTCCAGCGGCTTTGCCATCGCCTACCCCTTGAGCATGGGGCTGGCGGCAGGCGC GATGATCTTCGTGGTCTCTCATGAAGTCATCCCGGAAACCCACCGCAATGGCCATCAGACCTCGGCAACCCTGGGCCTGA TGGGCGGCTTTGCGGTGATGATGTTTCTCGATACGGCGCTGGGTTAA
Upstream 100 bases:
>100_bases GTTCCGTTGAACCAACCTTATATTCTCGGGCTCCCAGACGGGGTCGACTTTATATTTCAGTCACCATTGCTTCTCCCCCT TTACAAAGGTAGCCCTATCA
Downstream 100 bases:
>100_bases CCGCGCAAGGCTTGCAATGCAGGTGCGGCATGGATGCCGGCCGTTGCTGCCAGCTCGACTACGCGTGCTTCGTCACGGCC ATACACCAGCACCGCTTGCA
Product: Zinc transporter ZIP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MPTPASSRTPWAAWLNQLQGSPLVSLGFALALLIVVALGGISLYNAFYGTSQVNFNHALLGGIAGFLATALGAVMAVALR NVSQRAQDIMLGFAAGMMLAASSFSLILPGLEAARDITDSGPWAAATVVAGLGLGVLLMLGLDRFTPHEHESVGRQGPHS DRISRVWLFVLAITLHNLPEGMAIGVSFASGDMNVGLPLTTAIAIQDIPEGLAIALALRATGLSAFKAMLVAIGSGLMEP LGSLVGLGISSGFAIAYPLSMGLAAGAMIFVVSHEVIPETHRNGHQTSATLGLMGGFAVMMFLDTALG
Sequences:
>Translated_308_residues MPTPASSRTPWAAWLNQLQGSPLVSLGFALALLIVVALGGISLYNAFYGTSQVNFNHALLGGIAGFLATALGAVMAVALR NVSQRAQDIMLGFAAGMMLAASSFSLILPGLEAARDITDSGPWAAATVVAGLGLGVLLMLGLDRFTPHEHESVGRQGPHS DRISRVWLFVLAITLHNLPEGMAIGVSFASGDMNVGLPLTTAIAIQDIPEGLAIALALRATGLSAFKAMLVAIGSGLMEP LGSLVGLGISSGFAIAYPLSMGLAAGAMIFVVSHEVIPETHRNGHQTSATLGLMGGFAVMMFLDTALG >Mature_307_residues PTPASSRTPWAAWLNQLQGSPLVSLGFALALLIVVALGGISLYNAFYGTSQVNFNHALLGGIAGFLATALGAVMAVALRN VSQRAQDIMLGFAAGMMLAASSFSLILPGLEAARDITDSGPWAAATVVAGLGLGVLLMLGLDRFTPHEHESVGRQGPHSD RISRVWLFVLAITLHNLPEGMAIGVSFASGDMNVGLPLTTAIAIQDIPEGLAIALALRATGLSAFKAMLVAIGSGLMEPL GSLVGLGISSGFAIAYPLSMGLAAGAMIFVVSHEVIPETHRNGHQTSATLGLMGGFAVMMFLDTALG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577418, Length=162, Percent_Identity=38.8888888888889, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI229577422, Length=162, Percent_Identity=38.8888888888889, Blast_Score=101, Evalue=7e-22, Organism=Escherichia coli, GI1789419, Length=244, Percent_Identity=34.0163934426229, Blast_Score=76, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17507805, Length=314, Percent_Identity=32.1656050955414, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI24652846, Length=169, Percent_Identity=39.6449704142012, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 31617; Mature: 31485
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPASSRTPWAAWLNQLQGSPLVSLGFALALLIVVALGGISLYNAFYGTSQVNFNHALL CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH GGIAGFLATALGAVMAVALRNVSQRAQDIMLGFAAGMMLAASSFSLILPGLEAARDITDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCC GPWAAATVVAGLGLGVLLMLGLDRFTPHEHESVGRQGPHSDRISRVWLFVLAITLHNLPE CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC GMAIGVSFASGDMNVGLPLTTAIAIQDIPEGLAIALALRATGLSAFKAMLVAIGSGLMEP CEEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSLVGLGISSGFAIAYPLSMGLAAGAMIFVVSHEVIPETHRNGHQTSATLGLMGGFAVM HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH MFLDTALG HHHHHHCC >Mature Secondary Structure PTPASSRTPWAAWLNQLQGSPLVSLGFALALLIVVALGGISLYNAFYGTSQVNFNHALL CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH GGIAGFLATALGAVMAVALRNVSQRAQDIMLGFAAGMMLAASSFSLILPGLEAARDITDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCC GPWAAATVVAGLGLGVLLMLGLDRFTPHEHESVGRQGPHSDRISRVWLFVLAITLHNLPE CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC GMAIGVSFASGDMNVGLPLTTAIAIQDIPEGLAIALALRATGLSAFKAMLVAIGSGLMEP CEEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSLVGLGISSGFAIAYPLSMGLAAGAMIFVVSHEVIPETHRNGHQTSATLGLMGGFAVM HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH MFLDTALG HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]