BacMap

Definition	Pseudomonas syringae pv. syringae B728a, complete genome.
Accession	NC_007005
Length	6,093,698

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The map label for this gene is 66045104

Identifier: 66045104

GI number: 66045104

Start: 2136914

End: 2137459

Strand: Direct

Name: 66045104

Synonym: Psyr_1860

Alternate gene names: NA

Gene position: 2136914-2137459 (Clockwise)

Preceding gene: 66045102

Following gene: 66045105

Centisome position: 35.07

GC content: 60.07

Gene sequence:

>546_bases
ATGACCGATACAGATATCAGCGCTTCGAAAACCATGACTGAAGACGAAGCTGCCGAGTTCGCCGAGCAGGTATTCGATGT
GGCTCGCCAGGGGAATGCCGTCATGCTCGAGCGTCTGCTTGAAAAGGGCCTGCCGGCAGATCTGCGCAACCACAAGGGCG
ATACGCTGCTGATGCTGGCCAGCTATCACTGCCATGCGGATGCGGTCCGTGTGCTGCTGAACCACAAGGCTGATCCTGAA
ATCCGCAACGATAATGGCCAAAGCCCCATCGCCGGCGCAGCGTTCAAGGGCGATCTGGCAGTGGTCAGGTTGCTGGTCGA
GGCGGGTGCCGATATAGACGGTGCCTCTGCTGATGGCCGTACCGCATTGATGATGGCCGCGATGTTCAACCGCAACGAGA
TAGTCGATTACCTGATCAGTCAGGGCGCGGACCCGCATGCCACCGATGCCAAGGGCATCACTGCACTGGGCGCCGCTCAG
GCAATGGGCGCGACCGTCACCATCGAGCAGTTGAGCAAAATGGGCGTGCAGCCAGCCCGGTCCTGA

Upstream 100 bases:

>100_bases
GGATCGATGCTGATCGAACAGCTGGCGAGACTTGAGGTCAGTGTGTTTATCGATGCCGGGTCAACGCATGCCCGGAGTAC
CGTGCGCCAAGGAGTAGTTA

Downstream 100 bases:

>100_bases
CGGCGAGTGCATTGACCGCAAGGCATGAACACATAGAGGCGCGATGGATTTACCGTTATCCTTCGCGCCTCTTTTTTTGC
CCGCTATCAGGATCGCCCCC

Product: ankyrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTDTDISASKTMTEDEAAEFAEQVFDVARQGNAVMLERLLEKGLPADLRNHKGDTLLMLASYHCHADAVRVLLNHKADPE
IRNDNGQSPIAGAAFKGDLAVVRLLVEAGADIDGASADGRTALMMAAMFNRNEIVDYLISQGADPHATDAKGITALGAAQ
AMGATVTIEQLSKMGVQPARS

Sequences:

>Translated_181_residues
MTDTDISASKTMTEDEAAEFAEQVFDVARQGNAVMLERLLEKGLPADLRNHKGDTLLMLASYHCHADAVRVLLNHKADPE
IRNDNGQSPIAGAAFKGDLAVVRLLVEAGADIDGASADGRTALMMAAMFNRNEIVDYLISQGADPHATDAKGITALGAAQ
AMGATVTIEQLSKMGVQPARS
>Mature_180_residues
TDTDISASKTMTEDEAAEFAEQVFDVARQGNAVMLERLLEKGLPADLRNHKGDTLLMLASYHCHADAVRVLLNHKADPEI
RNDNGQSPIAGAAFKGDLAVVRLLVEAGADIDGASADGRTALMMAAMFNRNEIVDYLISQGADPHATDAKGITALGAAQA
MGATVTIEQLSKMGVQPARS

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI225543463, Length=154, Percent_Identity=35.0649350649351, Blast_Score=80, Evalue=7e-16,
Organism=Homo sapiens, GI268607595, Length=152, Percent_Identity=32.2368421052632, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI62988328, Length=152, Percent_Identity=32.2368421052632, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI225543461, Length=154, Percent_Identity=35.0649350649351, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI157739945, Length=157, Percent_Identity=32.484076433121, Blast_Score=79, Evalue=1e-15,
Organism=Homo sapiens, GI89363047, Length=139, Percent_Identity=30.9352517985612, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI55741641, Length=150, Percent_Identity=32, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI110431370, Length=155, Percent_Identity=35.4838709677419, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI70995267, Length=146, Percent_Identity=35.6164383561644, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI32967601, Length=132, Percent_Identity=34.8484848484849, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI52426735, Length=144, Percent_Identity=29.8611111111111, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI52426737, Length=144, Percent_Identity=29.8611111111111, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI188595682, Length=144, Percent_Identity=29.8611111111111, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI30425444, Length=137, Percent_Identity=30.6569343065693, Blast_Score=71, Evalue=5e-13,
Organism=Homo sapiens, GI67906195, Length=179, Percent_Identity=33.5195530726257, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI267844887, Length=150, Percent_Identity=32, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI70780353, Length=148, Percent_Identity=31.7567567567568, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI70780359, Length=148, Percent_Identity=31.7567567567568, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI70780355, Length=148, Percent_Identity=31.7567567567568, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI215598574, Length=148, Percent_Identity=31.7567567567568, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI70780357, Length=148, Percent_Identity=31.7567567567568, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI17864094, Length=168, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI24233530, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI68131557, Length=182, Percent_Identity=30.2197802197802, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI38569428, Length=145, Percent_Identity=31.7241379310345, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI38569426, Length=145, Percent_Identity=31.7241379310345, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI239748583, Length=161, Percent_Identity=32.9192546583851, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI239754056, Length=161, Percent_Identity=32.9192546583851, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI239742602, Length=159, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI7657265, Length=122, Percent_Identity=34.4262295081967, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI16975496, Length=145, Percent_Identity=31.0344827586207, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI18252778, Length=195, Percent_Identity=27.1794871794872, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI224809478, Length=148, Percent_Identity=29.0540540540541, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI224809474, Length=148, Percent_Identity=29.0540540540541, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI224809472, Length=148, Percent_Identity=29.0540540540541, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI224809470, Length=148, Percent_Identity=29.0540540540541, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI224809468, Length=148, Percent_Identity=29.0540540540541, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI224809476, Length=148, Percent_Identity=29.0540540540541, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71981411, Length=146, Percent_Identity=32.1917808219178, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI212646031, Length=152, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI212646033, Length=152, Percent_Identity=31.5789473684211, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71981389, Length=144, Percent_Identity=30.5555555555556, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI212646035, Length=152, Percent_Identity=31.5789473684211, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17542700, Length=144, Percent_Identity=30.5555555555556, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17540144, Length=133, Percent_Identity=34.5864661654135, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25145251, Length=144, Percent_Identity=30.5555555555556, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71981414, Length=146, Percent_Identity=32.1917808219178, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI212645194, Length=122, Percent_Identity=36.0655737704918, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581260, Length=126, Percent_Identity=38.0952380952381, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24581258, Length=126, Percent_Identity=38.0952380952381, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281359521, Length=145, Percent_Identity=35.1724137931034, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281359519, Length=145, Percent_Identity=35.1724137931034, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28558752, Length=145, Percent_Identity=35.1724137931034, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28558750, Length=145, Percent_Identity=35.1724137931034, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28558756, Length=145, Percent_Identity=35.1724137931034, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28558754, Length=145, Percent_Identity=35.1724137931034, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330478, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330482, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330474, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330480, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363919, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45551135, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28573593, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330476, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45550479, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161082085, Length=137, Percent_Identity=32.8467153284672, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161082099, Length=137, Percent_Identity=32.8467153284672, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24650843, Length=165, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161082096, Length=137, Percent_Identity=32.8467153284672, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161082081, Length=137, Percent_Identity=32.8467153284672, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161082110, Length=137, Percent_Identity=32.8467153284672, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161082106, Length=137, Percent_Identity=32.8467153284672, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161082089, Length=137, Percent_Identity=32.8467153284672, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221472807, Length=141, Percent_Identity=34.0425531914894, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17998549, Length=141, Percent_Identity=34.0425531914894, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI45552223, Length=141, Percent_Identity=34.0425531914894, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI161082092, Length=151, Percent_Identity=31.1258278145695, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45553307, Length=132, Percent_Identity=34.8484848484849, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644921, Length=132, Percent_Identity=34.8484848484849, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644919, Length=132, Percent_Identity=34.8484848484849, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643883, Length=128, Percent_Identity=34.375, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161077993, Length=133, Percent_Identity=33.8345864661654, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161077991, Length=128, Percent_Identity=34.375, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571867, Length=148, Percent_Identity=32.4324324324324, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI28571865, Length=148, Percent_Identity=32.4324324324324, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 19149; Mature: 19018

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTDISASKTMTEDEAAEFAEQVFDVARQGNAVMLERLLEKGLPADLRNHKGDTLLMLA
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCEEEEEE
SYHCHADAVRVLLNHKADPEIRNDNGQSPIAGAAFKGDLAVVRLLVEAGADIDGASADGR
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
TALMMAAMFNRNEIVDYLISQGADPHATDAKGITALGAAQAMGATVTIEQLSKMGVQPAR
HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCC
S
C
>Mature Secondary Structure 
TDTDISASKTMTEDEAAEFAEQVFDVARQGNAVMLERLLEKGLPADLRNHKGDTLLMLA
CCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCEEEEEE
SYHCHADAVRVLLNHKADPEIRNDNGQSPIAGAAFKGDLAVVRLLVEAGADIDGASADGR
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
TALMMAAMFNRNEIVDYLISQGADPHATDAKGITALGAAQAMGATVTIEQLSKMGVQPAR
HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]