| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is folE [H]
Identifier: 66045089
GI number: 66045089
Start: 2123976
End: 2124521
Strand: Reverse
Name: folE [H]
Synonym: Psyr_1845
Alternate gene names: 66045089
Gene position: 2124521-2123976 (Counterclockwise)
Preceding gene: 66045090
Following gene: 66045088
Centisome position: 34.86
GC content: 60.07
Gene sequence:
>546_bases GTGACACTGGAACAGAATTACACCGCCATCCTCGGGCAACTGGGCGAGGACGTCTCGCGCGAAGGTCTGCTGGACACCCC CAAGCGCGCCGCCAAGGCCATGCAGTATCTGTGTCGCGGTTACACGCAGACCCTGGAAGAAGTGACCAACGGCGCGCTGT TCAGCTCCGATGCCAGTGAAATGGTGATGGTCAAGGACATCGAGCTGTACTCGCTGTGCGAGCACCATCTGCTGCCGTTC ATTGGCAAGGCTCATGTGGCCTACATCCCGCAGGGCAAGGTGCTTGGCTTGTCGAAAGTGGCGCGTATCGTCGACATGTA TGCCCGCCGTCTGCAGATCCAGGAAAACCTCAGCCGCCAGATCGCCGAGGCCATCCAGCAGGTCACCGGCGCGCTGGGCG TTGCGGTGGTGATCGAAGCCAAGCACATGTGCATGATGATGCGTGGCGTCGAGAAGCAGAACTCGGCCATGATCACCTCG GTGATGCTGGGCGAATTCCGTGAAAACGCGGCCACCCGCAGTGAGTTTCTCAGCCTGATCAAGTGA
Upstream 100 bases:
>100_bases CCACTGGAGCGGGATCGGCAAACGGGACACCAGCTCGATTGGTAAAAAATCGGTACAGACCCAAACGTACCGCTCTGAAA CCTATACGGAATCACCCTCT
Downstream 100 bases:
>100_bases TCGTTCAGCCTGCGTTCACCTGCCGTGAGGCACGCTGAACGCACGGCTGGGCACGCCACCGCCCGCAAGAGGTATGACCT TGTTCATGAAAGCGTTAAGA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I 2; GTP-CH-I 2 [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTLEQNYTAILGQLGEDVSREGLLDTPKRAAKAMQYLCRGYTQTLEEVTNGALFSSDASEMVMVKDIELYSLCEHHLLPF IGKAHVAYIPQGKVLGLSKVARIVDMYARRLQIQENLSRQIAEAIQQVTGALGVAVVIEAKHMCMMMRGVEKQNSAMITS VMLGEFRENAATRSEFLSLIK
Sequences:
>Translated_181_residues MTLEQNYTAILGQLGEDVSREGLLDTPKRAAKAMQYLCRGYTQTLEEVTNGALFSSDASEMVMVKDIELYSLCEHHLLPF IGKAHVAYIPQGKVLGLSKVARIVDMYARRLQIQENLSRQIAEAIQQVTGALGVAVVIEAKHMCMMMRGVEKQNSAMITS VMLGEFRENAATRSEFLSLIK >Mature_180_residues TLEQNYTAILGQLGEDVSREGLLDTPKRAAKAMQYLCRGYTQTLEEVTNGALFSSDASEMVMVKDIELYSLCEHHLLPFI GKAHVAYIPQGKVLGLSKVARIVDMYARRLQIQENLSRQIAEAIQQVTGALGVAVVIEAKHMCMMMRGVEKQNSAMITSV MLGEFRENAATRSEFLSLIK
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=175, Percent_Identity=57.7142857142857, Blast_Score=231, Evalue=4e-61, Organism=Homo sapiens, GI4503949, Length=175, Percent_Identity=57.7142857142857, Blast_Score=231, Evalue=4e-61, Organism=Homo sapiens, GI66932970, Length=157, Percent_Identity=50.3184713375796, Blast_Score=174, Evalue=5e-44, Organism=Homo sapiens, GI66932972, Length=134, Percent_Identity=55.9701492537313, Blast_Score=173, Evalue=9e-44, Organism=Escherichia coli, GI1788476, Length=185, Percent_Identity=37.8378378378378, Blast_Score=117, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17560486, Length=174, Percent_Identity=59.7701149425287, Blast_Score=229, Evalue=8e-61, Organism=Saccharomyces cerevisiae, GI6321706, Length=173, Percent_Identity=58.9595375722543, Blast_Score=218, Evalue=4e-58, Organism=Drosophila melanogaster, GI24656791, Length=179, Percent_Identity=56.4245810055866, Blast_Score=213, Evalue=5e-56, Organism=Drosophila melanogaster, GI24656796, Length=179, Percent_Identity=56.4245810055866, Blast_Score=213, Evalue=7e-56, Organism=Drosophila melanogaster, GI24656782, Length=179, Percent_Identity=56.4245810055866, Blast_Score=213, Evalue=8e-56,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 20114; Mature: 19983
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEQNYTAILGQLGEDVSREGLLDTPKRAAKAMQYLCRGYTQTLEEVTNGALFSSDASE CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC MVMVKDIELYSLCEHHLLPFIGKAHVAYIPQGKVLGLSKVARIVDMYARRLQIQENLSRQ EEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH IAEAIQQVTGALGVAVVIEAKHMCMMMRGVEKQNSAMITSVMLGEFRENAATRSEFLSLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH K C >Mature Secondary Structure TLEQNYTAILGQLGEDVSREGLLDTPKRAAKAMQYLCRGYTQTLEEVTNGALFSSDASE CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC MVMVKDIELYSLCEHHLLPFIGKAHVAYIPQGKVLGLSKVARIVDMYARRLQIQENLSRQ EEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH IAEAIQQVTGALGVAVVIEAKHMCMMMRGVEKQNSAMITSVMLGEFRENAATRSEFLSLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]