| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is guaD [H]
Identifier: 66045056
GI number: 66045056
Start: 2085204
End: 2086538
Strand: Reverse
Name: guaD [H]
Synonym: Psyr_1812
Alternate gene names: 66045056
Gene position: 2086538-2085204 (Counterclockwise)
Preceding gene: 66045057
Following gene: 66045053
Centisome position: 34.24
GC content: 61.2
Gene sequence:
>1335_bases ATGAGTCACAACGAGAGTGCCATGAGTTCAGTTTCCCGCCGTAAAGCCTACCGCGCCGCCATCGTTCACAGCCTAGCCGA CCCGGCCGAAGTGGCGCTGGAGGCATCCTGTGAATACTTTGCCGACGGCTTGCTGCTGGTCGAGGACGGCAAGATCGTTT CGGTGGGTCACGCTGCCGATCTGCTGGGGCGGCTCGACGACGATGTCGAGTTGATCGAGTACACGGACGCACTGATAACA CCGGGGTTCATCGACACCCATATTCACTTGCCGCAAACCGGCATGATCGGCTCCTACGGCGAGCAATTGCTGGACTGGCT CAACACCTACACCTTCCCCTGCGAAAGTCAGTTCGCCGACCCCGCGCATTCGGCGCAGGTGGCCGACATCTTCATCAAGG AGCTGCTGCGCAACGGCACCACCACGGCGCTGGTGTTCGGCAGCGTGCACAAGGAATCGGTCGAGGCGTTTTTCAGCGCG GCCCAGGCACTTGATCTGCGCATGATCGCCGGCAAGGTGATGATGGACCGCAATGCGCCGGATTATCTGGTCGATACGCC AGAATCCGGGTATGCCGACAGCAAGGCACTGATCGAGCGCTGGCATGGCAAAGGTCGTTTGAGTTACGCAGTGACGCCGC GATTCGCGCCGACCAGCAGCCCGGAGCAATTGAGCCTGGCCGGCCAGTTGCTCACCGAGTATCCCGGCCTGTACCTGCAG ACCCACATCAGCGAGAACCTTCAGGAGATCGAGTGGGTCAAGGCGCTGTTCCCGGAGCGCAAGCATTACCTGGACGTCTA CGATCACTTCAACCTGCTAGGCGAGCGCTCGGTGTTCGCCCATGGCGTTCACCTGTGCGACGAACAATGCGCCCGACTGG CGCAGGCCGGTTCGGCGATTGCCTTCTGCCCGACCTCCAACCTGTTTTTGGGCAGCGGCCTGTTCAACCTGCCGATGGCC GAGAAGCACAAGGTGAATGTCGGTCTGGGCACCGACGTGGGCGGCGGCACCAGCTTTTCGATTCTGCAGACCCTGAACGA GGCCTACAAGGTCATGCAGATGCAGGGCGCACGGCTCAATCCGTTCAAGTCACTGTACCTGGCAACGCTGGGCGGCGCGC GGGCGCTGCGTCTGGAAGACAAGGTCGGCAGCCTGAAGCCCGGCAACGAGGCCGACTTCCTGGTGCTCGACTACAACGCC ACCCCACTGCTGTCGTATCGCTTGAAGCAGGCGAAGACTATCGAAGAGATTCTGTTCGTGCTGATGACCATCGGTGACGA CCGGACGGTGAAGCAGACCTGGTCGGGTGGGCGATTGGTGCATGACAGAGGCTAG
Upstream 100 bases:
>100_bases CGGAAATAATCGCCACTTACAATGTCAGCTTTGGCCAACACACCGCCAATGCCGAACCTATCGCCAGACTGCTGCCTGTA TCGCGCCGCAGTCGGTCGCA
Downstream 100 bases:
>100_bases CACCTCGTTCCTCACGCCCCAGCGTGCCAAGAGGACGCAGAGCGTCCGGAACGGCATGCCGACGCGGAGCGTCGCACGAT AGTTGAATTACGACGCAGAG
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MSHNESAMSSVSRRKAYRAAIVHSLADPAEVALEASCEYFADGLLLVEDGKIVSVGHAADLLGRLDDDVELIEYTDALIT PGFIDTHIHLPQTGMIGSYGEQLLDWLNTYTFPCESQFADPAHSAQVADIFIKELLRNGTTTALVFGSVHKESVEAFFSA AQALDLRMIAGKVMMDRNAPDYLVDTPESGYADSKALIERWHGKGRLSYAVTPRFAPTSSPEQLSLAGQLLTEYPGLYLQ THISENLQEIEWVKALFPERKHYLDVYDHFNLLGERSVFAHGVHLCDEQCARLAQAGSAIAFCPTSNLFLGSGLFNLPMA EKHKVNVGLGTDVGGGTSFSILQTLNEAYKVMQMQGARLNPFKSLYLATLGGARALRLEDKVGSLKPGNEADFLVLDYNA TPLLSYRLKQAKTIEEILFVLMTIGDDRTVKQTWSGGRLVHDRG
Sequences:
>Translated_444_residues MSHNESAMSSVSRRKAYRAAIVHSLADPAEVALEASCEYFADGLLLVEDGKIVSVGHAADLLGRLDDDVELIEYTDALIT PGFIDTHIHLPQTGMIGSYGEQLLDWLNTYTFPCESQFADPAHSAQVADIFIKELLRNGTTTALVFGSVHKESVEAFFSA AQALDLRMIAGKVMMDRNAPDYLVDTPESGYADSKALIERWHGKGRLSYAVTPRFAPTSSPEQLSLAGQLLTEYPGLYLQ THISENLQEIEWVKALFPERKHYLDVYDHFNLLGERSVFAHGVHLCDEQCARLAQAGSAIAFCPTSNLFLGSGLFNLPMA EKHKVNVGLGTDVGGGTSFSILQTLNEAYKVMQMQGARLNPFKSLYLATLGGARALRLEDKVGSLKPGNEADFLVLDYNA TPLLSYRLKQAKTIEEILFVLMTIGDDRTVKQTWSGGRLVHDRG >Mature_443_residues SHNESAMSSVSRRKAYRAAIVHSLADPAEVALEASCEYFADGLLLVEDGKIVSVGHAADLLGRLDDDVELIEYTDALITP GFIDTHIHLPQTGMIGSYGEQLLDWLNTYTFPCESQFADPAHSAQVADIFIKELLRNGTTTALVFGSVHKESVEAFFSAA QALDLRMIAGKVMMDRNAPDYLVDTPESGYADSKALIERWHGKGRLSYAVTPRFAPTSSPEQLSLAGQLLTEYPGLYLQT HISENLQEIEWVKALFPERKHYLDVYDHFNLLGERSVFAHGVHLCDEQCARLAQAGSAIAFCPTSNLFLGSGLFNLPMAE KHKVNVGLGTDVGGGTSFSILQTLNEAYKVMQMQGARLNPFKSLYLATLGGARALRLEDKVGSLKPGNEADFLVLDYNAT PLLSYRLKQAKTIEEILFVLMTIGDDRTVKQTWSGGRLVHDRG
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=446, Percent_Identity=35.2017937219731, Blast_Score=214, Evalue=1e-55, Organism=Escherichia coli, GI1789249, Length=440, Percent_Identity=52.9545454545455, Blast_Score=495, Evalue=1e-141, Organism=Saccharomyces cerevisiae, GI6319963, Length=395, Percent_Identity=32.9113924050633, Blast_Score=221, Evalue=1e-58, Organism=Drosophila melanogaster, GI24643849, Length=439, Percent_Identity=35.7630979498861, Blast_Score=228, Evalue=5e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 48807; Mature: 48676
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHNESAMSSVSRRKAYRAAIVHSLADPAEVALEASCEYFADGLLLVEDGKIVSVGHAAD CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHCCEEEEECCCEEEECHHHH LLGRLDDDVELIEYTDALITPGFIDTHIHLPQTGMIGSYGEQLLDWLNTYTFPCESQFAD HHHCCCCCHHHHHHHHHHHCCCCEECEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC PAHSAQVADIFIKELLRNGTTTALVFGSVHKESVEAFFSAAQALDLRMIAGKVMMDRNAP CCCCHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC DYLVDTPESGYADSKALIERWHGKGRLSYAVTPRFAPTSSPEQLSLAGQLLTEYPGLYLQ CCEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEE THISENLQEIEWVKALFPERKHYLDVYDHFNLLGERSVFAHGVHLCDEQCARLAQAGSAI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE AFCPTSNLFLGSGLFNLPMAEKHKVNVGLGTDVGGGTSFSILQTLNEAYKVMQMQGARLN EECCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PFKSLYLATLGGARALRLEDKVGSLKPGNEADFLVLDYNATPLLSYRLKQAKTIEEILFV HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH LMTIGDDRTVKQTWSGGRLVHDRG HHHCCCCCCHHHHCCCCEEECCCC >Mature Secondary Structure SHNESAMSSVSRRKAYRAAIVHSLADPAEVALEASCEYFADGLLLVEDGKIVSVGHAAD CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHCCEEEEECCCEEEECHHHH LLGRLDDDVELIEYTDALITPGFIDTHIHLPQTGMIGSYGEQLLDWLNTYTFPCESQFAD HHHCCCCCHHHHHHHHHHHCCCCEECEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC PAHSAQVADIFIKELLRNGTTTALVFGSVHKESVEAFFSAAQALDLRMIAGKVMMDRNAP CCCCHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC DYLVDTPESGYADSKALIERWHGKGRLSYAVTPRFAPTSSPEQLSLAGQLLTEYPGLYLQ CCEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEE THISENLQEIEWVKALFPERKHYLDVYDHFNLLGERSVFAHGVHLCDEQCARLAQAGSAI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE AFCPTSNLFLGSGLFNLPMAEKHKVNVGLGTDVGGGTSFSILQTLNEAYKVMQMQGARLN EECCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PFKSLYLATLGGARALRLEDKVGSLKPGNEADFLVLDYNATPLLSYRLKQAKTIEEILFV HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH LMTIGDDRTVKQTWSGGRLVHDRG HHHCCCCCCHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]