Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yedI [H]

Identifier: 66045047

GI number: 66045047

Start: 2076321

End: 2077280

Strand: Direct

Name: yedI [H]

Synonym: Psyr_1803

Alternate gene names: 66045047

Gene position: 2076321-2077280 (Clockwise)

Preceding gene: 66045046

Following gene: 66045054

Centisome position: 34.07

GC content: 58.75

Gene sequence:

>960_bases
ATGATTCAATCAGTGCCGTTTCCTTTTTTTACTTGCTCAAGGATTTTCATTTTGGCTGCTGGAAGCTTGCTTACCCTGCT
TGACGATATTGCGACGCTGCTCGATGACGTGGCACTGGCCACGAAGAAGACGGCGGGTGTGCTGGGTGATGATCTGGCGC
TCAATGCCCAGCAGGTCACCGGTGTTTCGGCGGATCGCGAGTTGCCGGTTGTCTGGGCCGTGGCCAAGGGGTCGCTGCTC
AACAAGGCCATTCTGGTTCCGGCAGCGTTGCTGATCAGTGCTTTCGCACCCTGGGCGATTCTGCCGTTGCTGATGATCGG
CGGTGCGTTTCTGTGCTTCGAGGGCTTCGAGAAAATCGCCCATAAATGGCTGCATCCCGAAACCGGCGAAGAGCATGAGC
AGCGCAAGCAGGCGTCGACGGATGCCTCAGTGGACATGGTGGCGTTCGAAAAGGAGCGCGTAAAAGGCGCGATTCGTACG
GACTTCATTCTTTCTGCGGAAATCATCGTGCTCGCACTGGGTGTGGTCTCGGCCAGACCCTTCATGGATCAGGTCGGTGT
GCTGGTCATCGTCGCAGTGCTGATCACCGTCGGTGTCTACGGGCTGGTGGCCGGTATCGTCAAACTCGATGACCTGGGCC
TGTACCTGAAGAAAAGCGCAGGTTCGGCGTCACAAAAGATCGGTGCCGGCCTGTTGTGGCTGGCACCGGTGTTGATGAAA
GTGCTGTCGATCGTCGGTACGGCTGCGATGTTCATGGTCGGCGGCGGGATTCTGGTCCACGGCCTGCCGTTCGCTCATCA
TTGGGTCGAAGGCGTGACCGAAGCGGCAGCCGGTGCGGTAGGCGGTCTGTCGATGGTTGTTCCGACGCTGATCGATGCGC
TCGCCGGGGTCATTGCCGGTGCCGTGCTGGTGCTGGTCGTGACGTTGATTGGCAAGGTCTGGAAAGCTGCGAAGGAGTGA

Upstream 100 bases:

>100_bases
CTGACGGGGTTCGGCGTGGCCTGTTTGCTGCATGCAGCGTCAAACGTTCACATCTGACCAAGGTCAGAGTTGCTGACTGC
CACACGATTGACTCTGGCGC

Downstream 100 bases:

>100_bases
TTGAGGCGGTCATCCACACTTCTGATCCAAGGCCGTGAAGGCGAGCCGGGCGACGCTTCGCTTGCTCGCGAAGGGGTTGG
TACAGCCAACCGAAGGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MIQSVPFPFFTCSRIFILAAGSLLTLLDDIATLLDDVALATKKTAGVLGDDLALNAQQVTGVSADRELPVVWAVAKGSLL
NKAILVPAALLISAFAPWAILPLLMIGGAFLCFEGFEKIAHKWLHPETGEEHEQRKQASTDASVDMVAFEKERVKGAIRT
DFILSAEIIVLALGVVSARPFMDQVGVLVIVAVLITVGVYGLVAGIVKLDDLGLYLKKSAGSASQKIGAGLLWLAPVLMK
VLSIVGTAAMFMVGGGILVHGLPFAHHWVEGVTEAAAGAVGGLSMVVPTLIDALAGVIAGAVLVLVVTLIGKVWKAAKE

Sequences:

>Translated_319_residues
MIQSVPFPFFTCSRIFILAAGSLLTLLDDIATLLDDVALATKKTAGVLGDDLALNAQQVTGVSADRELPVVWAVAKGSLL
NKAILVPAALLISAFAPWAILPLLMIGGAFLCFEGFEKIAHKWLHPETGEEHEQRKQASTDASVDMVAFEKERVKGAIRT
DFILSAEIIVLALGVVSARPFMDQVGVLVIVAVLITVGVYGLVAGIVKLDDLGLYLKKSAGSASQKIGAGLLWLAPVLMK
VLSIVGTAAMFMVGGGILVHGLPFAHHWVEGVTEAAAGAVGGLSMVVPTLIDALAGVIAGAVLVLVVTLIGKVWKAAKE
>Mature_319_residues
MIQSVPFPFFTCSRIFILAAGSLLTLLDDIATLLDDVALATKKTAGVLGDDLALNAQQVTGVSADRELPVVWAVAKGSLL
NKAILVPAALLISAFAPWAILPLLMIGGAFLCFEGFEKIAHKWLHPETGEEHEQRKQASTDASVDMVAFEKERVKGAIRT
DFILSAEIIVLALGVVSARPFMDQVGVLVIVAVLITVGVYGLVAGIVKLDDLGLYLKKSAGSASQKIGAGLLWLAPVLMK
VLSIVGTAAMFMVGGGILVHGLPFAHHWVEGVTEAAAGAVGGLSMVVPTLIDALAGVIAGAVLVLVVTLIGKVWKAAKE

Specific function: Unknown

COG id: COG2354

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788268, Length=303, Percent_Identity=57.0957095709571, Blast_Score=315, Evalue=3e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008526 [H]

Pfam domain/function: PF05661 DUF808 [H]

EC number: NA

Molecular weight: Translated: 33289; Mature: 33289

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSVPFPFFTCSRIFILAAGSLLTLLDDIATLLDDVALATKKTAGVLGDDLALNAQQVT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHC
GVSADRELPVVWAVAKGSLLNKAILVPAALLISAFAPWAILPLLMIGGAFLCFEGFEKIA
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKWLHPETGEEHEQRKQASTDASVDMVAFEKERVKGAIRTDFILSAEIIVLALGVVSARP
HHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
FMDQVGVLVIVAVLITVGVYGLVAGIVKLDDLGLYLKKSAGSASQKIGAGLLWLAPVLMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH
VLSIVGTAAMFMVGGGILVHGLPFAHHWVEGVTEAAAGAVGGLSMVVPTLIDALAGVIAG
HHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLVLVVTLIGKVWKAAKE
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQSVPFPFFTCSRIFILAAGSLLTLLDDIATLLDDVALATKKTAGVLGDDLALNAQQVT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHC
GVSADRELPVVWAVAKGSLLNKAILVPAALLISAFAPWAILPLLMIGGAFLCFEGFEKIA
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKWLHPETGEEHEQRKQASTDASVDMVAFEKERVKGAIRTDFILSAEIIVLALGVVSARP
HHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
FMDQVGVLVIVAVLITVGVYGLVAGIVKLDDLGLYLKKSAGSASQKIGAGLLWLAPVLMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH
VLSIVGTAAMFMVGGGILVHGLPFAHHWVEGVTEAAAGAVGGLSMVVPTLIDALAGVIAG
HHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLVLVVTLIGKVWKAAKE
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]