| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yajO [H]
Identifier: 66045034
GI number: 66045034
Start: 2042710
End: 2043705
Strand: Reverse
Name: yajO [H]
Synonym: Psyr_1790
Alternate gene names: 66045034
Gene position: 2043705-2042710 (Counterclockwise)
Preceding gene: 66045040
Following gene: 66045033
Centisome position: 33.54
GC content: 59.64
Gene sequence:
>996_bases ATGGACTACGTAAAGCTTGGCAACACAGGACTGGATATTTCCAGACTGTGCCTGGGATGCATGACATTCGGCGAGCCCGA TGCCGGAACGCATCCCTGGACACTGGGCGAAGAAGCAAGCAGACCGATCATCAAACACGCCGTCGAGCAAGGCATCAATT TTTTTGACACGGCCAATAGCTACTCGGCAGGTACTTCGGAAACCATCGTCGGTAAATTGCTCAAAGAGTTCACACGTCGC GACGAGACCGTGATCGCCACGAAGGTGTTCTTTCCGGCAAACATGTGGGAAGGCTCGACCCGCCCCAACGAAAAGGGGCT CTCGCGCAAGGCCATCATGTCCAGTATCGACGCGAGCCTGACGCGACTCGGCACTGACTATGTCGACCTGTACCAGATCC ATCGCTGGGACTATGACACGCCCATCGAAGAAACCATGGAAGCCCTGCACGATGTGGTCAGGGCCGGCAAGGCCAGGTAC ATCGGCGCGTCTTCCATGTACGTATGGCAGTTCGCCAAGGCCCAGCAGGTCGCGACCGCGCATGGCTGGAGCAGGTTCGT CTCGATGCAGAACTACCTGAACCTGGTCTATCGCGAAGAAGAGCGCGAGATGATCCCGCTGTGTATCGATCAGGGGGTCG GCCTGATGCCGTGGAGCCCGATGGCACGCGGCAGGCTGACCAGGCCCCATGGTCAGCAGACCGAGCGGACCAGAACCGAC GTATCCGGCCAGTCGTTTTACGAGGCGACAGAAAAGGAAGACGGTCGCGTGATCGATGCCGTGGAACAGCTGGCCGCAGA GCGCGGGGTGCCGATGGCGCAAATCGCACTGGCCTGGGTATTGGCCAAGCGCGGTGTATCCGCGCCCATCGTCGGCGCCT CCAAGGCGACGCAACTGGACGATGCCATCGCGGCACTGCAACTGGTGCTCAGTGATGAGGACATCAAACGCCTCGAGGCA CCGTACGTGCCCCATGCAGTAACCGGATTCGTCTGA
Upstream 100 bases:
>100_bases GAACCAATCGCGTCAAAGCGAGTTGTTCCGGGCAGACGTTGCCCAACTGTAAACGCGAAACGGCTCGGCGGCTGCTCAAT CAACGATAGACGGAGGATTC
Downstream 100 bases:
>100_bases CCGGCGCTGCAAACACCCCGGAAACCGGCGAACGGCATGAGCCTCGCCGGTTACCCGCTGCACACAGCGACGACGAGCGC CGGTAAAGATCGCACCGTAC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MDYVKLGNTGLDISRLCLGCMTFGEPDAGTHPWTLGEEASRPIIKHAVEQGINFFDTANSYSAGTSETIVGKLLKEFTRR DETVIATKVFFPANMWEGSTRPNEKGLSRKAIMSSIDASLTRLGTDYVDLYQIHRWDYDTPIEETMEALHDVVRAGKARY IGASSMYVWQFAKAQQVATAHGWSRFVSMQNYLNLVYREEEREMIPLCIDQGVGLMPWSPMARGRLTRPHGQQTERTRTD VSGQSFYEATEKEDGRVIDAVEQLAAERGVPMAQIALAWVLAKRGVSAPIVGASKATQLDDAIAALQLVLSDEDIKRLEA PYVPHAVTGFV
Sequences:
>Translated_331_residues MDYVKLGNTGLDISRLCLGCMTFGEPDAGTHPWTLGEEASRPIIKHAVEQGINFFDTANSYSAGTSETIVGKLLKEFTRR DETVIATKVFFPANMWEGSTRPNEKGLSRKAIMSSIDASLTRLGTDYVDLYQIHRWDYDTPIEETMEALHDVVRAGKARY IGASSMYVWQFAKAQQVATAHGWSRFVSMQNYLNLVYREEEREMIPLCIDQGVGLMPWSPMARGRLTRPHGQQTERTRTD VSGQSFYEATEKEDGRVIDAVEQLAAERGVPMAQIALAWVLAKRGVSAPIVGASKATQLDDAIAALQLVLSDEDIKRLEA PYVPHAVTGFV >Mature_331_residues MDYVKLGNTGLDISRLCLGCMTFGEPDAGTHPWTLGEEASRPIIKHAVEQGINFFDTANSYSAGTSETIVGKLLKEFTRR DETVIATKVFFPANMWEGSTRPNEKGLSRKAIMSSIDASLTRLGTDYVDLYQIHRWDYDTPIEETMEALHDVVRAGKARY IGASSMYVWQFAKAQQVATAHGWSRFVSMQNYLNLVYREEEREMIPLCIDQGVGLMPWSPMARGRLTRPHGQQTERTRTD VSGQSFYEATEKEDGRVIDAVEQLAAERGVPMAQIALAWVLAKRGVSAPIVGASKATQLDDAIAALQLVLSDEDIKRLEA PYVPHAVTGFV
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=318, Percent_Identity=33.3333333333333, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI4504825, Length=316, Percent_Identity=33.2278481012658, Blast_Score=148, Evalue=9e-36, Organism=Homo sapiens, GI27436964, Length=318, Percent_Identity=33.3333333333333, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI27436962, Length=318, Percent_Identity=33.3333333333333, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI27436971, Length=319, Percent_Identity=33.8557993730408, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI27436966, Length=318, Percent_Identity=33.0188679245283, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI223718702, Length=309, Percent_Identity=27.5080906148867, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI41327764, Length=301, Percent_Identity=28.2392026578073, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI41152114, Length=309, Percent_Identity=26.2135922330097, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI223718708, Length=142, Percent_Identity=34.5070422535211, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI87081735, Length=330, Percent_Identity=57.2727272727273, Blast_Score=401, Evalue=1e-113, Organism=Escherichia coli, GI1789375, Length=332, Percent_Identity=32.8313253012048, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1789199, Length=346, Percent_Identity=30.635838150289, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1788070, Length=334, Percent_Identity=32.3353293413174, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1788081, Length=304, Percent_Identity=28.2894736842105, Blast_Score=101, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6325169, Length=336, Percent_Identity=43.75, Blast_Score=287, Evalue=2e-78, Organism=Saccharomyces cerevisiae, GI6323998, Length=327, Percent_Identity=33.3333333333333, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319958, Length=307, Percent_Identity=32.8990228013029, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6319951, Length=287, Percent_Identity=33.1010452961672, Blast_Score=142, Evalue=9e-35, Organism=Saccharomyces cerevisiae, GI6322615, Length=257, Percent_Identity=33.852140077821, Blast_Score=129, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6321052, Length=153, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24640980, Length=333, Percent_Identity=28.5285285285285, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI45549126, Length=333, Percent_Identity=28.5285285285285, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24646155, Length=328, Percent_Identity=27.7439024390244, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24646159, Length=173, Percent_Identity=32.9479768786127, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36796; Mature: 36796
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYVKLGNTGLDISRLCLGCMTFGEPDAGTHPWTLGEEASRPIIKHAVEQGINFFDTANS CCCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCHHCCCCC YSAGTSETIVGKLLKEFTRRDETVIATKVFFPANMWEGSTRPNEKGLSRKAIMSSIDASL CCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHHHH TRLGTDYVDLYQIHRWDYDTPIEETMEALHDVVRAGKARYIGASSMYVWQFAKAQQVATA HHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHH HGWSRFVSMQNYLNLVYREEEREMIPLCIDQGVGLMPWSPMARGRLTRPHGQQTERTRTD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHC VSGQSFYEATEKEDGRVIDAVEQLAAERGVPMAQIALAWVLAKRGVSAPIVGASKATQLD CCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH DAIAALQLVLSDEDIKRLEAPYVPHAVTGFV HHHHHHHHHHCCHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure MDYVKLGNTGLDISRLCLGCMTFGEPDAGTHPWTLGEEASRPIIKHAVEQGINFFDTANS CCCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCHHCCCCC YSAGTSETIVGKLLKEFTRRDETVIATKVFFPANMWEGSTRPNEKGLSRKAIMSSIDASL CCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHHHH TRLGTDYVDLYQIHRWDYDTPIEETMEALHDVVRAGKARYIGASSMYVWQFAKAQQVATA HHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHH HGWSRFVSMQNYLNLVYREEEREMIPLCIDQGVGLMPWSPMARGRLTRPHGQQTERTRTD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHC VSGQSFYEATEKEDGRVIDAVEQLAAERGVPMAQIALAWVLAKRGVSAPIVGASKATQLD CCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH DAIAALQLVLSDEDIKRLEAPYVPHAVTGFV HHHHHHHHHHCCHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]