Click here to switch to the map view.

The map label for this gene is 66045029

Identifier: 66045029

GI number: 66045029

Start: 2035635

End: 2037194

Strand: Direct

Name: 66045029

Synonym: Psyr_1785

Alternate gene names: NA

Gene position: 2035635-2037194 (Clockwise)

Preceding gene: 66045025

Following gene: 66045030

Centisome position: 33.41

GC content: 59.55

Gene sequence:

>1560_bases
ATGGCTGCGGAGCCTCTTCCATTGACCCAAGCCCCTCGTCTCCACCTGATCCTCGGCGATCAGCTTTCCTTCGATCTCGC
ATCCTTGGCGGGTCTGATCCCCGAGCGCGACACGGTCCTGATGGTCGAGGTCATGGAAGAGGCGAGTCATGTGCCGCATC
ATCCGCAGAAGATCGTGCTGATCTTCAGTGCCATGCGTCATTTTGCCGAGGCGCTGCGTGAGCGTGGTGTTCGGGTGCAG
TACGTCATGCTCGATGATCCGCAGAACACAGGGTCGGTGCCGGGTGAGTTACAGCGCTGGCAGGCCCTGTTGCGAGCAGA
AGAGTTGCACATCACCGAGTGCGGCGACTGGCGTCTGGAACAGTCGATCAAGGACTGCGGGTTGCCCATCCAGTGGCACG
CCGATACGCGCTTTCTTTGTTCCCGCGACGAGTTCTCGTCGTGGGCGCACGGCAAGAAGCAGTTGCGCATGGAGTTCTTC
TATAGGGAGATGCGCCGCAAAAGCAGGCTGCTGTTGAACGGCGACGGTACGCCGGTCGGTGGTGCCTGGAACTTTGATGC
CGAGAACCGCAAGGCGCTGCCCAAGGGCGTGGCAGCGCCTTATCCGCTGCGCTTTTCCGCCGACACCATTACCCGCCAGG
TACTGAAACTGGTAGGCGAGCGCTTTGCCAGCCATTACGGCTCGCTGGATAATTTCGACTATCCGGTTACGCATGCCGAT
GCCCAGGCGCTGTGGGAGTACTTTCTGGATTACGGCCTGGCCGGTTTCGGCGATTATCAGGACGCGATGGCCACTGATGA
GCCTTTTCTGTTTCATGCGCGCATCAGTGCTGCGTTGAACATCGGCCTGCTGGATTTACGCCAGGTGTGCAGTGACGTTG
AGTCCGCGTACTGGGCGGGCAGGGTGGGGCTGAATGCTGCCGAAGGTTTCATTCGCCAACTGATCGGCTGGCGGGAGTAT
GTGCGTGGCGTCTATTGGCTGAAAATGCCTGATTACGCGAGCGGCAATCTGTTCGGTAACAGCCGGCCGCTGCCCGAGTT
TTACTGGACCGGCGAAACGCAGATGAACTGCATGAGTCAGGCCATCGGCCAGAGCCTGAAGCATGCCTACGCCCACCACA
TTCAGCGCCTGATGGTCACCGGCAACTTTGCCCTGCTTGCCGGGATAGTGCCGGAGCAGATCTGCGAGTGGTACCTGGCG
ATCTACATGGATGCCTTCGACTGGGTCGAGCTGCCCAATACGCTGGGCATGGTCATGCATGCCGATGGCGGCTATCTGGG
CTCCAAACCCTATTGCGCCAGCGGCCAGTACATCAAGCGCATGTCTGACTATTGCCGCGGCTGTGCGTACAAGGTCACTG
AAAGCACCACTGAGGATGCCTGTCCGTTCAATGCGCTGTACTGGCATTTCCTGATGCGCCATGGCGACCTGTTGCGTCGC
AATCAGCGCATGGCGATTATCTATAAAAACCTTGATCGCATGGCTGAGCCCAAACAGCAGGCGCTGTGGGCGCGTGGCGA
GCATCTGCTGGCCAGGCTCGATGCCGGAGAGGCGCTTTGA

Upstream 100 bases:

>100_bases
CGCTGAGGCCGGGGGGCCGTCGTTTTGGGTGTCTGATAGGTACCCCATCGAAAAGCGCTATGAAAATCTTGTACATGAAA
TTACATTGGTACAAGTTTTT

Downstream 100 bases:

>100_bases
AAAAAGCCGAGCTGCCAGTCAAAACCTGTGTGGTCTGCGGGCTGCCGTTCACTTGGCGCAAGAAGTGGGCGCGCTGCTGG
GATGAGGTGCTTTATTGCTC

Product: deoxyribodipyrimidine photolyase-like protein protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MAAEPLPLTQAPRLHLILGDQLSFDLASLAGLIPERDTVLMVEVMEEASHVPHHPQKIVLIFSAMRHFAEALRERGVRVQ
YVMLDDPQNTGSVPGELQRWQALLRAEELHITECGDWRLEQSIKDCGLPIQWHADTRFLCSRDEFSSWAHGKKQLRMEFF
YREMRRKSRLLLNGDGTPVGGAWNFDAENRKALPKGVAAPYPLRFSADTITRQVLKLVGERFASHYGSLDNFDYPVTHAD
AQALWEYFLDYGLAGFGDYQDAMATDEPFLFHARISAALNIGLLDLRQVCSDVESAYWAGRVGLNAAEGFIRQLIGWREY
VRGVYWLKMPDYASGNLFGNSRPLPEFYWTGETQMNCMSQAIGQSLKHAYAHHIQRLMVTGNFALLAGIVPEQICEWYLA
IYMDAFDWVELPNTLGMVMHADGGYLGSKPYCASGQYIKRMSDYCRGCAYKVTESTTEDACPFNALYWHFLMRHGDLLRR
NQRMAIIYKNLDRMAEPKQQALWARGEHLLARLDAGEAL

Sequences:

>Translated_519_residues
MAAEPLPLTQAPRLHLILGDQLSFDLASLAGLIPERDTVLMVEVMEEASHVPHHPQKIVLIFSAMRHFAEALRERGVRVQ
YVMLDDPQNTGSVPGELQRWQALLRAEELHITECGDWRLEQSIKDCGLPIQWHADTRFLCSRDEFSSWAHGKKQLRMEFF
YREMRRKSRLLLNGDGTPVGGAWNFDAENRKALPKGVAAPYPLRFSADTITRQVLKLVGERFASHYGSLDNFDYPVTHAD
AQALWEYFLDYGLAGFGDYQDAMATDEPFLFHARISAALNIGLLDLRQVCSDVESAYWAGRVGLNAAEGFIRQLIGWREY
VRGVYWLKMPDYASGNLFGNSRPLPEFYWTGETQMNCMSQAIGQSLKHAYAHHIQRLMVTGNFALLAGIVPEQICEWYLA
IYMDAFDWVELPNTLGMVMHADGGYLGSKPYCASGQYIKRMSDYCRGCAYKVTESTTEDACPFNALYWHFLMRHGDLLRR
NQRMAIIYKNLDRMAEPKQQALWARGEHLLARLDAGEAL
>Mature_518_residues
AAEPLPLTQAPRLHLILGDQLSFDLASLAGLIPERDTVLMVEVMEEASHVPHHPQKIVLIFSAMRHFAEALRERGVRVQY
VMLDDPQNTGSVPGELQRWQALLRAEELHITECGDWRLEQSIKDCGLPIQWHADTRFLCSRDEFSSWAHGKKQLRMEFFY
REMRRKSRLLLNGDGTPVGGAWNFDAENRKALPKGVAAPYPLRFSADTITRQVLKLVGERFASHYGSLDNFDYPVTHADA
QALWEYFLDYGLAGFGDYQDAMATDEPFLFHARISAALNIGLLDLRQVCSDVESAYWAGRVGLNAAEGFIRQLIGWREYV
RGVYWLKMPDYASGNLFGNSRPLPEFYWTGETQMNCMSQAIGQSLKHAYAHHIQRLMVTGNFALLAGIVPEQICEWYLAI
YMDAFDWVELPNTLGMVMHADGGYLGSKPYCASGQYIKRMSDYCRGCAYKVTESTTEDACPFNALYWHFLMRHGDLLRRN
QRMAIIYKNLDRMAEPKQQALWARGEHLLARLDAGEAL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59148; Mature: 59017

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEPLPLTQAPRLHLILGDQLSFDLASLAGLIPERDTVLMVEVMEEASHVPHHPQKIVL
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCHHHHH
IFSAMRHFAEALRERGVRVQYVMLDDPQNTGSVPGELQRWQALLRAEELHITECGDWRLE
HHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHH
QSIKDCGLPIQWHADTRFLCSRDEFSSWAHGKKQLRMEFFYREMRRKSRLLLNGDGTPVG
HHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
GAWNFDAENRKALPKGVAAPYPLRFSADTITRQVLKLVGERFASHYGSLDNFDYPVTHAD
CEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AQALWEYFLDYGLAGFGDYQDAMATDEPFLFHARISAALNIGLLDLRQVCSDVESAYWAG
HHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEHEEHHHHHHCCHHHHHHHHHHHHHHHHHC
RVGLNAAEGFIRQLIGWREYVRGVYWLKMPDYASGNLFGNSRPLPEFYWTGETQMNCMSQ
CCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHH
AIGQSLKHAYAHHIQRLMVTGNFALLAGIVPEQICEWYLAIYMDAFDWVELPNTLGMVMH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHCEEEE
ADGGYLGSKPYCASGQYIKRMSDYCRGCAYKVTESTTEDACPFNALYWHFLMRHGDLLRR
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
NQRMAIIYKNLDRMAEPKQQALWARGEHLLARLDAGEAL
CCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AAEPLPLTQAPRLHLILGDQLSFDLASLAGLIPERDTVLMVEVMEEASHVPHHPQKIVL
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCHHHHH
IFSAMRHFAEALRERGVRVQYVMLDDPQNTGSVPGELQRWQALLRAEELHITECGDWRLE
HHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHH
QSIKDCGLPIQWHADTRFLCSRDEFSSWAHGKKQLRMEFFYREMRRKSRLLLNGDGTPVG
HHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
GAWNFDAENRKALPKGVAAPYPLRFSADTITRQVLKLVGERFASHYGSLDNFDYPVTHAD
CEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AQALWEYFLDYGLAGFGDYQDAMATDEPFLFHARISAALNIGLLDLRQVCSDVESAYWAG
HHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEHEEHHHHHHCCHHHHHHHHHHHHHHHHHC
RVGLNAAEGFIRQLIGWREYVRGVYWLKMPDYASGNLFGNSRPLPEFYWTGETQMNCMSQ
CCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHH
AIGQSLKHAYAHHIQRLMVTGNFALLAGIVPEQICEWYLAIYMDAFDWVELPNTLGMVMH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHCEEEE
ADGGYLGSKPYCASGQYIKRMSDYCRGCAYKVTESTTEDACPFNALYWHFLMRHGDLLRR
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
NQRMAIIYKNLDRMAEPKQQALWARGEHLLARLDAGEAL
CCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA