| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044946
Identifier: 66044946
GI number: 66044946
Start: 1909129
End: 1911519
Strand: Direct
Name: 66044946
Synonym: Psyr_1701
Alternate gene names: NA
Gene position: 1909129-1911519 (Clockwise)
Preceding gene: 66044945
Following gene: 66044947
Centisome position: 31.33
GC content: 59.31
Gene sequence:
>2391_bases ATGAGCACGCACCAGCACGCGCAAGATCCGGATGAAAAAGCAACCTTCCTTGAACGCCTTATTTTCAACCATCGCCCGGC AGTGATTCTCCTCTGCCTGCTGGCCAGCCTCTTTCTGTTCTGGCAGGCCACGCAGGTGCGGCCTTCCACCAGTTTCGAGA AGATGATCCCGCTGTCTCATCCGTTCGTTCAGAACATGCTCAAACATCGTAACGATCTGGCGAACCTTGGTAACACGGTG CGCATATCGGTCGAAGCGGTGGACGGCGACATCTTCTCCAAGGAGTACATGGAGACCCTGCGCCAGATCAGCGACGAAGT GTTTTACATCCCCGGCGTGGACCGCTCCGGGCTCAAGTCGCTGTGGAGCCCCAGCGTGCGCTGGACCGAAGTGACGGAAG AAGGCTTTGCGGGAGGCGAGGTGATCCCGCAGAGCTACGACGGCTCGGACGCCAGTCTGGACCAGTTGCGCAACAACGTG CTCAAGTCCGGACAGGTCGGGCGCCTGGTCGCCAACGATTTCAGATCGAGCATCATTGATGTTCCGCTGCAGGAGTCTTA CCCCGACCCGGCAGACCAGGGCAAATTACTGGCGCTGGACTATCAGCAATTCTCCCACCAGCTCGAAGAAAAGATCCGCG ACAAGTATCAGGCGCAAAACCCCGACATCAGGATTCACATCGTCGGCTTCGCCAAGAAGGTCGGCGACCTGATCGACGGT CTGTTCATGGTGGTGATGTTCTTTGGCATCGCCTTTCTGATCACGCTGGTTATGCTGATCTGGTTCACCCGGTGTATCCG CAGCACGGTGGCGGTACTGAGCACCACGCTGATCGCGGTGATCTGGCAATTGGGGCTGATGCATGTGGTCGGCTTCGGTA TCGACCCGTATTCGATGCTGGTGCCGTTTCTGATTTTCGCCATCGGCATCTCTCACGGTGTGCAGAAAATCAACGGTATT GCCCTGCAATCCAGCGAGGCCGACAACGCCCTAACCGCTGCGCGGCGGACGTTTCGTCAGCTGTTTCTGCCCGGCATGAT TGCGATTCTGGCCGATGCGGTGGGCTTTATCACGCTGCTGATTATCGACATCGGGGTGATCCGCGAGCTGGCCATCGGCG CTTCCATTGGTGTGGCGGTGATCGTGTTCACCAACCTGATCCTGCTGCCGGTGGCGATTTCCTACGTGGGCATCAGCAAA AAGGCAGTGAGCCGCAGCAAGCAGGATGCGGTCTCCGAGCATCCTTTCTGGCGATTGCTGGCGAACTTTGCCAGCGCCAG AGTCGCGCCGGTGTCGATTGTGCTGGCGCTGCTGGCCTTCGGAGGGGGGCTTTGGTACAGCCAGAACCTGAAGATCGGCG ACCTGGATCAGGGCGCGCCCGAACTGCGCCCCGACTCGCGTTACAACAGGGACAACGCGTTCATCATCAACCATTACTCG ACCAGTTCCGATGTGCTGGTGGTCATGGTCAAGACAGGCCCCGAGGGTTGCTCGGCGTATTCGACAATGTCAGCGATCAA CGAGCTGGCCTGGAAGATGGAGAACACCCAGGGCGTGCAGTCGGCCATTTCCCTGGTCACGGTGTCCAGACAGATGATCA AGGGCATGAACGAGGGCAACCTGAAATGGGAGAGTCTGTCGCGTAACAAAGACGTGCTGAACAACTCCATCGCCCGCGCC GACGGCCTGTACAACACCGATTGTTCGCTGGCGCCGCTGCTGGTGTTCCTCAACGACCATAAAGCCGAAACCCTCCACCG GGCGGTGCATGCAGTGCAGGACTTCGCCAGACAGAACGATACGCCGGACCGGCAATTTCTGCTGGCCGCCGGCAACGCCG GCATCGAGGCCGCGACCAACGAAGTGATCAAGCAGTCCGAGTGGGTGATTCTGCTGCTGGTCTACCTCTGCGTGGCCGCG ATGTGCATGATCACCTTCCGCTCATGGGCCGCCACGCTGTGCATCGTCCTGCCGCTGGTGCTGACCTCGGTGCTGGGCAA CGCCCTGATGGCCTTCATAGGCATCGGTGTCAAGGTCGCGACCCTGCCGGTGGTGGCGCTGGGCGTTGGCATCGGCGTCG ATTACGGCATCTACATTTACAGCCGTCTCGAGAGTTTCCTGCGCGCCGGACTGCCATTGCAGGAAGCCTATTACGAAACC CTCAAATCCACCGGCAAGGCCGTGCTGTTCACTGGCCTGTGTCTGGCCATCGGTGTGTGCACCTGGATCTTCTCGGCGAT CAAGTTCCAGGCCGACATGGGCCTGATGCTGACCTTCATGCTGCTGTGGAACATGTTCGGCGCACTGTGGCTGCTGCCTG CGCTGGCGCGGTTTCTGATCAGGCCGGAGAAGATGGCGGGGAAGGTGGGGAATTCGTTGTTTTCACATTGA
Upstream 100 bases:
>100_bases CAATCTGATTCTGGTAGGACAGGGCGGCGTTCGCCTCACCTCGTCGACGGGCGCCGATACGACCCAACAATAAGACCTTT CAGGGCGGGGATATTCAGGC
Downstream 100 bases:
>100_bases GACACACATGAGGTTATCCATCCTCTTCTTGGTGACGTGTCTTCGCTCTGTGCTGAACGTTTCGCAGCGCGCGGTTGCTT TGCTGAACGGCTTGTGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 796; Mature: 795
Protein sequence:
>796_residues MSTHQHAQDPDEKATFLERLIFNHRPAVILLCLLASLFLFWQATQVRPSTSFEKMIPLSHPFVQNMLKHRNDLANLGNTV RISVEAVDGDIFSKEYMETLRQISDEVFYIPGVDRSGLKSLWSPSVRWTEVTEEGFAGGEVIPQSYDGSDASLDQLRNNV LKSGQVGRLVANDFRSSIIDVPLQESYPDPADQGKLLALDYQQFSHQLEEKIRDKYQAQNPDIRIHIVGFAKKVGDLIDG LFMVVMFFGIAFLITLVMLIWFTRCIRSTVAVLSTTLIAVIWQLGLMHVVGFGIDPYSMLVPFLIFAIGISHGVQKINGI ALQSSEADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIGVIRELAIGASIGVAVIVFTNLILLPVAISYVGISK KAVSRSKQDAVSEHPFWRLLANFASARVAPVSIVLALLAFGGGLWYSQNLKIGDLDQGAPELRPDSRYNRDNAFIINHYS TSSDVLVVMVKTGPEGCSAYSTMSAINELAWKMENTQGVQSAISLVTVSRQMIKGMNEGNLKWESLSRNKDVLNNSIARA DGLYNTDCSLAPLLVFLNDHKAETLHRAVHAVQDFARQNDTPDRQFLLAAGNAGIEAATNEVIKQSEWVILLLVYLCVAA MCMITFRSWAATLCIVLPLVLTSVLGNALMAFIGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYET LKSTGKAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIRPEKMAGKVGNSLFSH
Sequences:
>Translated_796_residues MSTHQHAQDPDEKATFLERLIFNHRPAVILLCLLASLFLFWQATQVRPSTSFEKMIPLSHPFVQNMLKHRNDLANLGNTV RISVEAVDGDIFSKEYMETLRQISDEVFYIPGVDRSGLKSLWSPSVRWTEVTEEGFAGGEVIPQSYDGSDASLDQLRNNV LKSGQVGRLVANDFRSSIIDVPLQESYPDPADQGKLLALDYQQFSHQLEEKIRDKYQAQNPDIRIHIVGFAKKVGDLIDG LFMVVMFFGIAFLITLVMLIWFTRCIRSTVAVLSTTLIAVIWQLGLMHVVGFGIDPYSMLVPFLIFAIGISHGVQKINGI ALQSSEADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIGVIRELAIGASIGVAVIVFTNLILLPVAISYVGISK KAVSRSKQDAVSEHPFWRLLANFASARVAPVSIVLALLAFGGGLWYSQNLKIGDLDQGAPELRPDSRYNRDNAFIINHYS TSSDVLVVMVKTGPEGCSAYSTMSAINELAWKMENTQGVQSAISLVTVSRQMIKGMNEGNLKWESLSRNKDVLNNSIARA DGLYNTDCSLAPLLVFLNDHKAETLHRAVHAVQDFARQNDTPDRQFLLAAGNAGIEAATNEVIKQSEWVILLLVYLCVAA MCMITFRSWAATLCIVLPLVLTSVLGNALMAFIGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYET LKSTGKAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIRPEKMAGKVGNSLFSH >Mature_795_residues STHQHAQDPDEKATFLERLIFNHRPAVILLCLLASLFLFWQATQVRPSTSFEKMIPLSHPFVQNMLKHRNDLANLGNTVR ISVEAVDGDIFSKEYMETLRQISDEVFYIPGVDRSGLKSLWSPSVRWTEVTEEGFAGGEVIPQSYDGSDASLDQLRNNVL KSGQVGRLVANDFRSSIIDVPLQESYPDPADQGKLLALDYQQFSHQLEEKIRDKYQAQNPDIRIHIVGFAKKVGDLIDGL FMVVMFFGIAFLITLVMLIWFTRCIRSTVAVLSTTLIAVIWQLGLMHVVGFGIDPYSMLVPFLIFAIGISHGVQKINGIA LQSSEADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIGVIRELAIGASIGVAVIVFTNLILLPVAISYVGISKK AVSRSKQDAVSEHPFWRLLANFASARVAPVSIVLALLAFGGGLWYSQNLKIGDLDQGAPELRPDSRYNRDNAFIINHYST SSDVLVVMVKTGPEGCSAYSTMSAINELAWKMENTQGVQSAISLVTVSRQMIKGMNEGNLKWESLSRNKDVLNNSIARAD GLYNTDCSLAPLLVFLNDHKAETLHRAVHAVQDFARQNDTPDRQFLLAAGNAGIEAATNEVIKQSEWVILLLVYLCVAAM CMITFRSWAATLCIVLPLVLTSVLGNALMAFIGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYETL KSTGKAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIRPEKMAGKVGNSLFSH
Specific function: Unknown
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 87698; Mature: 87567
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHQHAQDPDEKATFLERLIFNHRPAVILLCLLASLFLFWQATQVRPSTSFEKMIPLSH CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC PFVQNMLKHRNDLANLGNTVRISVEAVDGDIFSKEYMETLRQISDEVFYIPGVDRSGLKS HHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH LWSPSVRWTEVTEEGFAGGEVIPQSYDGSDASLDQLRNNVLKSGQVGRLVANDFRSSIID HCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC VPLQESYPDPADQGKLLALDYQQFSHQLEEKIRDKYQAQNPDIRIHIVGFAKKVGDLIDG CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH LFMVVMFFGIAFLITLVMLIWFTRCIRSTVAVLSTTLIAVIWQLGLMHVVGFGIDPYSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VPFLIFAIGISHGVQKINGIALQSSEADNALTAARRTFRQLFLPGMIAILADAVGFITLL HHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIDIGVIRELAIGASIGVAVIVFTNLILLPVAISYVGISKKAVSRSKQDAVSEHPFWRLL HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCHHHHHH ANFASARVAPVSIVLALLAFGGGLWYSQNLKIGDLDQGAPELRPDSRYNRDNAFIINHYS HHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC TSSDVLVVMVKTGPEGCSAYSTMSAINELAWKMENTQGVQSAISLVTVSRQMIKGMNEGN CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC LKWESLSRNKDVLNNSIARADGLYNTDCSLAPLLVFLNDHKAETLHRAVHAVQDFARQND CCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC TPDRQFLLAAGNAGIEAATNEVIKQSEWVILLLVYLCVAAMCMITFRSWAATLCIVLPLV CCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTSVLGNALMAFIGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYET HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH LKSTGKAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPEKMAGKVGNSLFSH CCHHHHHHHHHHHCCC >Mature Secondary Structure STHQHAQDPDEKATFLERLIFNHRPAVILLCLLASLFLFWQATQVRPSTSFEKMIPLSH CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC PFVQNMLKHRNDLANLGNTVRISVEAVDGDIFSKEYMETLRQISDEVFYIPGVDRSGLKS HHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH LWSPSVRWTEVTEEGFAGGEVIPQSYDGSDASLDQLRNNVLKSGQVGRLVANDFRSSIID HCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC VPLQESYPDPADQGKLLALDYQQFSHQLEEKIRDKYQAQNPDIRIHIVGFAKKVGDLIDG CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH LFMVVMFFGIAFLITLVMLIWFTRCIRSTVAVLSTTLIAVIWQLGLMHVVGFGIDPYSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VPFLIFAIGISHGVQKINGIALQSSEADNALTAARRTFRQLFLPGMIAILADAVGFITLL HHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIDIGVIRELAIGASIGVAVIVFTNLILLPVAISYVGISKKAVSRSKQDAVSEHPFWRLL HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCHHHHHH ANFASARVAPVSIVLALLAFGGGLWYSQNLKIGDLDQGAPELRPDSRYNRDNAFIINHYS HHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC TSSDVLVVMVKTGPEGCSAYSTMSAINELAWKMENTQGVQSAISLVTVSRQMIKGMNEGN CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC LKWESLSRNKDVLNNSIARADGLYNTDCSLAPLLVFLNDHKAETLHRAVHAVQDFARQND CCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC TPDRQFLLAAGNAGIEAATNEVIKQSEWVILLLVYLCVAAMCMITFRSWAATLCIVLPLV CCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTSVLGNALMAFIGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYET HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH LKSTGKAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPEKMAGKVGNSLFSH CCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]