| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is pabC [H]
Identifier: 66044895
GI number: 66044895
Start: 1855049
End: 1855864
Strand: Direct
Name: pabC [H]
Synonym: Psyr_1650
Alternate gene names: 66044895
Gene position: 1855049-1855864 (Clockwise)
Preceding gene: 66044894
Following gene: 66044896
Centisome position: 30.44
GC content: 62.01
Gene sequence:
>816_bases ATGCCCGACTGGGTCGATGGCTGCCCCGCAGACGCCTTGTCCCTCAAGGACCGAGGGCTGGCCTACGGCGATGGACTGTT TGAAACCATCGTCGTCAAGGCCGGGCAGCCATTGCTTCTGGAGCGTCATCTGCAGCGTCTCGAAAGCGGCTGCGCGCGCT TGTCGATCGCAACCGATCACGCGCTGATCCGTGCTGAAATGACCCGCTTCGCTGCAGAGCTTGGTGATGGGGTCATGAAG CTCATCCTTACCCGTGGCGACAGCCAGCGCGGCTACGCTCCTGCCCCCAATGCCCAATCGCGTCGAATCCTGCAGGGCGG CCCTGCGCCAGCCTATCCCGGTGCGCATGCCGAGCAGGGCGTGCGCCTGTTTGCCTGCCAGACGCGACTGGCGGAACAGC CGCTTCTGGCCGGCCTCAAGCACCTCAATCGTCTGGAGCAGGTACTGGCCCGCTCCGAGTGGCGTGACAGCGAGCACGCC GAGGGCTTGATGCGTGACACGTCAGGACGACTGATAGAGGGTGTCTACAGCAACCTGTTTCTGGTCAGTCAGGGCCGTTT GCTGACTGCTGATCTCAGCCGCTGCGGGGTCGCAGGTGTGATGCGTGCCGAATTGCTGGATCAGGCACCAAAGCTGGGGC TGACTGTCGATATCCGTGACCTGCACATGTCTGACCTTGAATCGGCAGACGAAGTGTTTCTATGCAACAGCGTGTACGGC GTCTGGCCGGTTTGCAGCTTTGCAGCGTTGAACTGGCCGGTCGGGCCGCTCACCCGTAAACTGCAAGGTATTGCTCGCAC CCTTCTGGATATCTGA
Upstream 100 bases:
>100_bases CTCACGAAGCGCGCCGCATGCCGATCGACGTCGTTCTGTCGAACTCCTTCGGCTTTGGTGGCACCAACGGCTCGCTGGTA TTCCGTCGGTTCGCCGAGTA
Downstream 100 bases:
>100_bases TTTTGATCCGAAAAATATTGGTGTTGCTGGAAACAGCGGTTGTCCTGGCAGGTTTGCTGTTCGGCTTTGCGTTCTGGCAG CAGTACCAGGCGCTGAACCA
Product: 4-amino-4-deoxychorismate lyase
Products: NA
Alternate protein names: 4-amino-4-deoxychorismate lyase; ADC lyase; ADCL [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MPDWVDGCPADALSLKDRGLAYGDGLFETIVVKAGQPLLLERHLQRLESGCARLSIATDHALIRAEMTRFAAELGDGVMK LILTRGDSQRGYAPAPNAQSRRILQGGPAPAYPGAHAEQGVRLFACQTRLAEQPLLAGLKHLNRLEQVLARSEWRDSEHA EGLMRDTSGRLIEGVYSNLFLVSQGRLLTADLSRCGVAGVMRAELLDQAPKLGLTVDIRDLHMSDLESADEVFLCNSVYG VWPVCSFAALNWPVGPLTRKLQGIARTLLDI
Sequences:
>Translated_271_residues MPDWVDGCPADALSLKDRGLAYGDGLFETIVVKAGQPLLLERHLQRLESGCARLSIATDHALIRAEMTRFAAELGDGVMK LILTRGDSQRGYAPAPNAQSRRILQGGPAPAYPGAHAEQGVRLFACQTRLAEQPLLAGLKHLNRLEQVLARSEWRDSEHA EGLMRDTSGRLIEGVYSNLFLVSQGRLLTADLSRCGVAGVMRAELLDQAPKLGLTVDIRDLHMSDLESADEVFLCNSVYG VWPVCSFAALNWPVGPLTRKLQGIARTLLDI >Mature_270_residues PDWVDGCPADALSLKDRGLAYGDGLFETIVVKAGQPLLLERHLQRLESGCARLSIATDHALIRAEMTRFAAELGDGVMKL ILTRGDSQRGYAPAPNAQSRRILQGGPAPAYPGAHAEQGVRLFACQTRLAEQPLLAGLKHLNRLEQVLARSEWRDSEHAE GLMRDTSGRLIEGVYSNLFLVSQGRLLTADLSRCGVAGVMRAELLDQAPKLGLTVDIRDLHMSDLESADEVFLCNSVYGV WPVCSFAALNWPVGPLTRKLQGIARTLLDI
Specific function: Converts 4-amino-4-deoxychorismate into 4-aminobenzoate (PABA) and pyruvate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787338, Length=263, Percent_Identity=34.9809885931559, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI48994963, Length=264, Percent_Identity=26.5151515151515, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017824 - InterPro: IPR001544 - InterPro: IPR018300 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =4.1.3.38 [H]
Molecular weight: Translated: 29549; Mature: 29418
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDWVDGCPADALSLKDRGLAYGDGLFETIVVKAGQPLLLERHLQRLESGCARLSIATDH CCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEHHHH ALIRAEMTRFAAELGDGVMKLILTRGDSQRGYAPAPNAQSRRILQGGPAPAYPGAHAEQG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCC VRLFACQTRLAEQPLLAGLKHLNRLEQVLARSEWRDSEHAEGLMRDTSGRLIEGVYSNLF CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCEE LVSQGRLLTADLSRCGVAGVMRAELLDQAPKLGLTVDIRDLHMSDLESADEVFLCNSVYG EEECCCEEEHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHCHHHHCCCCCEEEECCHHH VWPVCSFAALNWPVGPLTRKLQGIARTLLDI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDWVDGCPADALSLKDRGLAYGDGLFETIVVKAGQPLLLERHLQRLESGCARLSIATDH CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEHHHH ALIRAEMTRFAAELGDGVMKLILTRGDSQRGYAPAPNAQSRRILQGGPAPAYPGAHAEQG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCC VRLFACQTRLAEQPLLAGLKHLNRLEQVLARSEWRDSEHAEGLMRDTSGRLIEGVYSNLF CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCEE LVSQGRLLTADLSRCGVAGVMRAELLDQAPKLGLTVDIRDLHMSDLESADEVFLCNSVYG EEECCCEEEHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHCHHHHCCCCCEEEECCHHH VWPVCSFAALNWPVGPLTRKLQGIARTLLDI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550484 [H]