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The map label for this gene is yceD [H]

Identifier: 66044888

GI number: 66044888

Start: 1849690

End: 1850217

Strand: Direct

Name: yceD [H]

Synonym: Psyr_1643

Alternate gene names: 66044888

Gene position: 1849690-1850217 (Clockwise)

Preceding gene: 66044886

Following gene: 66044889

Centisome position: 30.35

GC content: 55.49

Gene sequence:

>528_bases
ATGTTGAATGACCCGATTCCATCTCACGTTGACCCGCGCAAATTGTCCGATCGCGGCACTACCCTTCAGGGTGAAGTGCT
GCTGGGCGATCTGAAGAGACTCTGCGACCCGCTTGCCGACACTGTCGGTACGGTGCAGGCGAAATTCGTTTTTGAGCGTG
ACGAACGCCGTTCTGTGGTTATCCACAGTTCGATAGACGTCCCGGTCAAGATGGTTTGCCAGCGTTGTCTTGAGCTGGTG
ACCCTGCCGATCCACAGCGAATGCAGTTACGTTGTGGTGAAGGAGGGTGCGAATACCCAGTCGTTACCGAAAGGTTATGA
CGTGCTGGAACTGGGCGAAGATCCTTTGGATCTGCTGGCATTGATCGAGGAGGAGCTATTGCTCGCCTTGCCCATTGTGC
CTGCTCATCATCCTGAAGAATGCCAGCAACCGGCGGGTCTCGATGAGCCCGAACCGAGCGTGGACGAGGTAACGCGGTCC
AACCCGTTCAGTGTATTGGCGCAGTTAAAGCGTGACCCAAACGTTTAG

Upstream 100 bases:

>100_bases
CTCCGTAGGCTGAGCGTTGATTCTAAAGAGTGGCCGGAGTGACGAACAGGCCTGAATTTCCTTTGACATGCCCGGGGGGC
ATCCCTAGAATGCTGCGCCT

Downstream 100 bases:

>100_bases
GAGTTAATCAATTATGGCTGTTCAGCAGAACAAAAAATCCCGCTCTGCCCGTGACATGCGTCGTTCGCACGACGCTCTTG
AGGCAAGCACTCTGTCGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: G30K [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLNDPIPSHVDPRKLSDRGTTLQGEVLLGDLKRLCDPLADTVGTVQAKFVFERDERRSVVIHSSIDVPVKMVCQRCLELV
TLPIHSECSYVVVKEGANTQSLPKGYDVLELGEDPLDLLALIEEELLLALPIVPAHHPEECQQPAGLDEPEPSVDEVTRS
NPFSVLAQLKRDPNV

Sequences:

>Translated_175_residues
MLNDPIPSHVDPRKLSDRGTTLQGEVLLGDLKRLCDPLADTVGTVQAKFVFERDERRSVVIHSSIDVPVKMVCQRCLELV
TLPIHSECSYVVVKEGANTQSLPKGYDVLELGEDPLDLLALIEEELLLALPIVPAHHPEECQQPAGLDEPEPSVDEVTRS
NPFSVLAQLKRDPNV
>Mature_175_residues
MLNDPIPSHVDPRKLSDRGTTLQGEVLLGDLKRLCDPLADTVGTVQAKFVFERDERRSVVIHSSIDVPVKMVCQRCLELV
TLPIHSECSYVVVKEGANTQSLPKGYDVLELGEDPLDLLALIEEELLLALPIVPAHHPEECQQPAGLDEPEPSVDEVTRS
NPFSVLAQLKRDPNV

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0159 [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=167, Percent_Identity=29.3413173652695, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 19318; Mature: 19318

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDPIPSHVDPRKLSDRGTTLQGEVLLGDLKRLCDPLADTVGTVQAKFVFERDERRSVV
CCCCCCCCCCCCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEE
IHSSIDVPVKMVCQRCLELVTLPIHSECSYVVVKEGANTQSLPKGYDVLELGEDPLDLLA
EECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHH
LIEEELLLALPIVPAHHPEECQQPAGLDEPEPSVDEVTRSNPFSVLAQLKRDPNV
HHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNDPIPSHVDPRKLSDRGTTLQGEVLLGDLKRLCDPLADTVGTVQAKFVFERDERRSVV
CCCCCCCCCCCCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEE
IHSSIDVPVKMVCQRCLELVTLPIHSECSYVVVKEGANTQSLPKGYDVLELGEDPLDLLA
EECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHH
LIEEELLLALPIVPAHHPEECQQPAGLDEPEPSVDEVTRSNPFSVLAQLKRDPNV
HHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]