Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is cysW [C]

Identifier: 66044848

GI number: 66044848

Start: 1802565

End: 1803362

Strand: Reverse

Name: cysW [C]

Synonym: Psyr_1603

Alternate gene names: 66044848

Gene position: 1803362-1802565 (Counterclockwise)

Preceding gene: 66044849

Following gene: 66044847

Centisome position: 29.59

GC content: 60.4

Gene sequence:

>798_bases
ATGTCACGCGTTGAACGAGGGCCTGCGAGCATTTATCACAAGACGGTGGTCTGCCTGCTGTTCCTGATCCTGTTGCTGCC
GCTGGCCGGCACCTTCCTGTACTCGATCGCGACCAGCTGGTCGGCGACCATTCTGCCCAGTGGCCTGACCTTCAAATGGT
ACGTGGCGCTGTGGAGCGACCCACGCTTTCTGACGGCGTTCGGCCAGTCACTGCTGGTCTGCGTCGGCGCACTGATCCTT
TCGGTGGTGCTGATTCTGCCCCTGCTGTTCGTCGTGCATTACTACTTTCCGCGCCTCGACGGGCTGATGAACATCCTCAT
CCTGCTGCCGTTTGCCGTGCCACCCGTGGTTTCCTCGGTCGGCCTGCTGCAGCTGTATGGCTCAGGCCCCATGGCGATGG
TCGGCACACCGTGGATTCTGATCGGCTGTTACTTCACCGTCGCCCTGCCCTTCATGTACCGCGCCATCACCAACAACCTG
CAGGCCATCAACCTGACAGACCTGATGGACGCCGCCCGGTTGCTCGGCGCCAGCACCTGGCAGGCGGCGTTCATGGTGGT
GCTGCCCAACCTGCGCAAGGGCCTGATGATTGCCCTGCTGCTGTCGTTCTCGTTCCTGTTCGGCGAATTCGTATTCGCCA
ACCTGCTGGTCGGCACGCGCTATGAAACCCTGCAGGTGTACCTCAACAACATGCGCAACAGCAGCGGTCACTTCAACAGC
GCGCTGGTGATTTCCTATTTCCTCTTCGTGCTGGTGCTGACCTGGGCCGCCAATCGACTGAACAAGGACAAAGACTGA

Upstream 100 bases:

>100_bases
ACGCTGGACCCGAACATGGCCAGCGCGCTGGCGATGATTCTGGTCGGTCTCATGACCCTGGTCACGGTGGTCCATCAGTG
GCTGTTGAGAAGGAGCTACC

Downstream 100 bases:

>100_bases
GATGAGTTTTGTCAGCATTGAAAACCTGCAGAAAAGCTACGCCAGCACGTCAGTGTTCAGCGACATCAACTGCAGCATTG
CGAAAGGCGAGTTCGTTACC

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease; Permease Of ABC Transporter; ABC Transporter; ABC-Type Transporter Permease Component; Polyamine ABC Transporter Permease Protein; Transmembrane Component Of ABC Transporter; ABC Transporter Membrane Protein; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; Spermidine/Putrescine ABC Transporter Permease Component; ABC Transporter Integral Membrane Subunit; ABC Transporter Inner Membrane Protein; ABC Transport System Permease Component; Spermidine/Putrescine Abc Transporter Permease Protein; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSDPRFLTAFGQSLLVCVGALIL
SVVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSVGLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNL
QAINLTDLMDAARLLGASTWQAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNS
ALVISYFLFVLVLTWAANRLNKDKD

Sequences:

>Translated_265_residues
MSRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSDPRFLTAFGQSLLVCVGALIL
SVVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSVGLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNL
QAINLTDLMDAARLLGASTWQAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNS
ALVISYFLFVLVLTWAANRLNKDKD
>Mature_264_residues
SRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSDPRFLTAFGQSLLVCVGALILS
VVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSVGLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNLQ
AINLTDLMDAARLLGASTWQAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNSA
LVISYFLFVLVLTWAANRLNKDKD

Specific function: Part Of The Abc Transporter Complex Cysawtp (Tc 3.A.1.6.1) Involved In Sulfate/Thiosulfate Import. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29463; Mature: 29331

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEEECC
PRFLTAFGQSLLVCVGALILSVVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNLQAINLTDLMDAARLLGASTW
HHHHEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCHHH
QAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
ALVISYFLFVLVLTWAANRLNKDKD
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SRVERGPASIYHKTVVCLLFLILLLPLAGTFLYSIATSWSATILPSGLTFKWYVALWSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEEECC
PRFLTAFGQSLLVCVGALILSVVLILPLLFVVHYYFPRLDGLMNILILLPFAVPPVVSSV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLQLYGSGPMAMVGTPWILIGCYFTVALPFMYRAITNNLQAINLTDLMDAARLLGASTW
HHHHEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCHHH
QAAFMVVLPNLRKGLMIALLLSFSFLFGEFVFANLLVGTRYETLQVYLNNMRNSSGHFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
ALVISYFLFVLVLTWAANRLNKDKD
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA