| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044836
Identifier: 66044836
GI number: 66044836
Start: 1790517
End: 1790909
Strand: Direct
Name: 66044836
Synonym: Psyr_1591
Alternate gene names: NA
Gene position: 1790517-1790909 (Clockwise)
Preceding gene: 66044835
Following gene: 66044838
Centisome position: 29.38
GC content: 58.02
Gene sequence:
>393_bases GTGATTGATCATCTGGACCACCTGGTACTGACCACTGCCGATATCGACGCCTGCAAGGATTTTTACGTACGCGTTCTGGG CATGACCCCTGAACGCTTTCGTCAGGGGCGTCTGGCATTTCGCTTCGGCAATCAGAAAATCAACGTCCATGAACGCGGCA AGGAGTTCGAGCCCAAGGCTCACTTGCCGGTGCCAGGTGCGCTGGATCTGTGTTTCATCGCCACCATCCCGCTGGAGCAG GTGATTGTGCACCTGCAGGAGCAGGACTGGCCGATCGTCGAAGGTCCGGTCGAGCGCACCGGTGCTACCGGGCCGATCTG GTCGGTGTATGTGCGTGATCCGGATCTTAACCTGATCGAAATTTCCGAGCCGGCGGCTGATGCGTCGATGTAA
Upstream 100 bases:
>100_bases GACGCTGCCACCCGTGCCGAGTGGCGTCGGCTTGGCATTATCTGATCCGAAACCTGACCATTGTCGTAAACAGAACTCTA TTCCAAACGGAGCTGATCCC
Downstream 100 bases:
>100_bases TCGCGCTCGATGAGGGCGGTTGCATCATTGCATCAGCAGCCCTTCGCAGGCGCTCCGTCCTTCGGCACGAATGCGCCTTT TTCGCCTGGCTTGGTGATGA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MIDHLDHLVLTTADIDACKDFYVRVLGMTPERFRQGRLAFRFGNQKINVHERGKEFEPKAHLPVPGALDLCFIATIPLEQ VIVHLQEQDWPIVEGPVERTGATGPIWSVYVRDPDLNLIEISEPAADASM
Sequences:
>Translated_130_residues MIDHLDHLVLTTADIDACKDFYVRVLGMTPERFRQGRLAFRFGNQKINVHERGKEFEPKAHLPVPGALDLCFIATIPLEQ VIVHLQEQDWPIVEGPVERTGATGPIWSVYVRDPDLNLIEISEPAADASM >Mature_130_residues MIDHLDHLVLTTADIDACKDFYVRVLGMTPERFRQGRLAFRFGNQKINVHERGKEFEPKAHLPVPGALDLCFIATIPLEQ VIVHLQEQDWPIVEGPVERTGATGPIWSVYVRDPDLNLIEISEPAADASM
Specific function: Is critically involved in promoting the replication of S.typhimurium cells inside host macrophages, suggesting a role in the establishment of bacterial colonization within macrophages. May be involved in the biosynthesis and modification of the peptidogly
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI254039722, Length=122, Percent_Identity=56.5573770491803, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14659; Mature: 14659
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDHLDHLVLTTADIDACKDFYVRVLGMTPERFRQGRLAFRFGNQKINVHERGKEFEPKA CCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHCCCEEEEECCEEEECCCCCCCCCCCC HLPVPGALDLCFIATIPLEQVIVHLQEQDWPIVEGPVERTGATGPIWSVYVRDPDLNLIE CCCCCCCHHEEEEECCCHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCEEE ISEPAADASM ECCCCCCCCC >Mature Secondary Structure MIDHLDHLVLTTADIDACKDFYVRVLGMTPERFRQGRLAFRFGNQKINVHERGKEFEPKA CCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHCCCEEEEECCEEEECCCCCCCCCCCC HLPVPGALDLCFIATIPLEQVIVHLQEQDWPIVEGPVERTGATGPIWSVYVRDPDLNLIE CCCCCCCHHEEEEECCCHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCEEE ISEPAADASM ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]