| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is nadA [H]
Identifier: 66044788
GI number: 66044788
Start: 1735836
End: 1736894
Strand: Direct
Name: nadA [H]
Synonym: Psyr_1542
Alternate gene names: 66044788
Gene position: 1735836-1736894 (Clockwise)
Preceding gene: 66044787
Following gene: 66044790
Centisome position: 28.49
GC content: 60.81
Gene sequence:
>1059_bases ATGACACAGATCTCCGAACGTTTCCTGGTGCAGGCGCATCTCGATGCCAAACAGCCCAGGACGTTGAGCCCGGCAGAGCA GGCGCGTTACCGTGCCGACATTGCTGCTGAACTCAAGAAGCAGGACGCCGTGCTGGTTGCTCACTATTACTGTGATCCGG TTATCCAGGCGCTGGCCGAGGAGACCGGTGGCTGCGTGGCCGACTCCCTGGAAATGGCGCGCTTCAGCAATAACCACGCG GCCAGCACTGTATTGGTGGCGGGTGTGCGTTTCATGGGCGAAACCGCGAAGATCCTCAACCCGGAAAAACGCGTGTTCAT GCCGACGCTTGAAGCCACCTGCTCGCTTGACGTGGGGTGCCCGGTCGACGAGTTTTCCGCCTTTTGCGACCAGCACCCGG AACGTACCGTGGTGGTGTATGCCAACACCTCGGCAGCCGTCAAAGCCCGCGCGGACTGGGTGGTGACCTCAGGCTGTGCG CTGGAAATCGTTGAGAGCCTGATGGACAACGGTGAGAAAATCATCTGGGCGCCAGACAAGCACCTGGGTCGCTACATCCA GCGTGAAACCGGTGCCGACATGCTGTTGTGGGACGGTGCCTGCATCGTTCACGAAGAGTTCAAGTCCAAGCAGCTCGAAG ACATGAAAGCCCTGTACCCCGAGGCGGCGATTCTGGTTCACCCGGAGTCGCCGGAAGCGGTCATCGAGCTGGCTGACGTG GTCGGCTCGACCAGTCAGATGATTGCGGCAGCGCAACGCCTGCCCAACAAGACGTTCATCGTTGCCACTGACCGGGGCAT CTTCTACAAGATGCAGCAGCTGTGCCCGGACAAGATCTTCATCGAGGCGCCTACGGCCGGCAACGGCGCGGCGTGCCGGA GTTGTGCACATTGCCCATGGATGGCGATGAATACGCTTGAACGCACCTTGCAGTGCCTGCGTGAGGGCAGTAACGAGATA TTCGTCGACCCGGCGCTGATCCCCCATGCTGTACGCCCCTTGCAGCGCATGCTGGACTTCACTCAGGCAGCGCGTTTGCG ACAGGCCGGCAACGCCTGA
Upstream 100 bases:
>100_bases CTTTGTACAGATGGCGCAGCCTCTGTCAGGCTTTTTTTATTGCCTGTATTTCGGGTGTAAACTTGCCTTTCGCGCACTGG CGCTTTCAGGTCCCGTGAAC
Downstream 100 bases:
>100_bases CAGCGGTCATGAAAAAGCCCGACTGAAGCGTCGGGCTTTTCATTGTTGTACGTGTCAAGCCGTCTTGCGACGCCGGACGA TCAGTTCATCATGTCCTTGA
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTQISERFLVQAHLDAKQPRTLSPAEQARYRADIAAELKKQDAVLVAHYYCDPVIQALAEETGGCVADSLEMARFSNNHA ASTVLVAGVRFMGETAKILNPEKRVFMPTLEATCSLDVGCPVDEFSAFCDQHPERTVVVYANTSAAVKARADWVVTSGCA LEIVESLMDNGEKIIWAPDKHLGRYIQRETGADMLLWDGACIVHEEFKSKQLEDMKALYPEAAILVHPESPEAVIELADV VGSTSQMIAAAQRLPNKTFIVATDRGIFYKMQQLCPDKIFIEAPTAGNGAACRSCAHCPWMAMNTLERTLQCLREGSNEI FVDPALIPHAVRPLQRMLDFTQAARLRQAGNA
Sequences:
>Translated_352_residues MTQISERFLVQAHLDAKQPRTLSPAEQARYRADIAAELKKQDAVLVAHYYCDPVIQALAEETGGCVADSLEMARFSNNHA ASTVLVAGVRFMGETAKILNPEKRVFMPTLEATCSLDVGCPVDEFSAFCDQHPERTVVVYANTSAAVKARADWVVTSGCA LEIVESLMDNGEKIIWAPDKHLGRYIQRETGADMLLWDGACIVHEEFKSKQLEDMKALYPEAAILVHPESPEAVIELADV VGSTSQMIAAAQRLPNKTFIVATDRGIFYKMQQLCPDKIFIEAPTAGNGAACRSCAHCPWMAMNTLERTLQCLREGSNEI FVDPALIPHAVRPLQRMLDFTQAARLRQAGNA >Mature_351_residues TQISERFLVQAHLDAKQPRTLSPAEQARYRADIAAELKKQDAVLVAHYYCDPVIQALAEETGGCVADSLEMARFSNNHAA STVLVAGVRFMGETAKILNPEKRVFMPTLEATCSLDVGCPVDEFSAFCDQHPERTVVVYANTSAAVKARADWVVTSGCAL EIVESLMDNGEKIIWAPDKHLGRYIQRETGADMLLWDGACIVHEEFKSKQLEDMKALYPEAAILVHPESPEAVIELADVV GSTSQMIAAAQRLPNKTFIVATDRGIFYKMQQLCPDKIFIEAPTAGNGAACRSCAHCPWMAMNTLERTLQCLREGSNEIF VDPALIPHAVRPLQRMLDFTQAARLRQAGNA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=332, Percent_Identity=67.4698795180723, Blast_Score=462, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 38752; Mature: 38621
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQISERFLVQAHLDAKQPRTLSPAEQARYRADIAAELKKQDAVLVAHYYCDPVIQALAE CCCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH ETGGCVADSLEMARFSNNHAASTVLVAGVRFMGETAKILNPEKRVFMPTLEATCSLDVGC HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCHHEEEECHHHHEEECCCC PVDEFSAFCDQHPERTVVVYANTSAAVKARADWVVTSGCALEIVESLMDNGEKIIWAPDK CHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEECCHHHHHHHHHHCCCCEEEECCCH HLGRYIQRETGADMLLWDGACIVHEEFKSKQLEDMKALYPEAAILVHPESPEAVIELADV HHHHHHHHHCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH VGSTSQMIAAAQRLPNKTFIVATDRGIFYKMQQLCPDKIFIEAPTAGNGAACRSCAHCPW HCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCH MAMNTLERTLQCLREGSNEIFVDPALIPHAVRPLQRMLDFTQAARLRQAGNA HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TQISERFLVQAHLDAKQPRTLSPAEQARYRADIAAELKKQDAVLVAHYYCDPVIQALAE CCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH ETGGCVADSLEMARFSNNHAASTVLVAGVRFMGETAKILNPEKRVFMPTLEATCSLDVGC HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCHHEEEECHHHHEEECCCC PVDEFSAFCDQHPERTVVVYANTSAAVKARADWVVTSGCALEIVESLMDNGEKIIWAPDK CHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEECCHHHHHHHHHHCCCCEEEECCCH HLGRYIQRETGADMLLWDGACIVHEEFKSKQLEDMKALYPEAAILVHPESPEAVIELADV HHHHHHHHHCCCCEEEECCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH VGSTSQMIAAAQRLPNKTFIVATDRGIFYKMQQLCPDKIFIEAPTAGNGAACRSCAHCPW HCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCH MAMNTLERTLQCLREGSNEIFVDPALIPHAVRPLQRMLDFTQAARLRQAGNA HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]