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The map label for this gene is 66044760

Identifier: 66044760

GI number: 66044760

Start: 1699012

End: 1700103

Strand: Reverse

Name: 66044760

Synonym: Psyr_1513

Alternate gene names: NA

Gene position: 1700103-1699012 (Counterclockwise)

Preceding gene: 66044761

Following gene: 66044759

Centisome position: 27.9

GC content: 56.59

Gene sequence:

>1092_bases
ATGCTCAGTAAGGTGATGGATGCCTGGTCTGGGCTTGTAGATGGCTTTTACAGGAACCAGTTTGGAGGCAATGAGCGGAT
CCGGCTTTACGAGAGCATGACCGCTCTGCTCGAGAACGGGGTGCCGCTCGACCTGGCCATTGATCGTATTGGATCGATCT
ACAGTGATGGAGGCCGACGTGCTCGACATCCGATCGCGCTTGCCAGCTATGGCATAGGCAAAGCTGTGGACGGCGGCAAG
ACGCTGGCCCAGGCCTGCCTTAACTGGGTGCCTTATCAGGAGCACGCCGTTATCAGCGCCGGCGAGAAGTCAGGGAACTT
GATCCAGGCATTCAGCGACTGCGTGCGGATCATCGAAGCTCGGCAAAAAGTGATGAAGCTGGTGGTCTCAACGGCCTCGT
ACCCGGTTTTTGTCTGGAGCCTGATGGCCTACTTGCTGAACGTAATCGCCACCCGGGTGGTGCCGGCCATGAGCCGCTCA
TCCAACCCAGAAGCCTGGTCCGGCGCACCCATGGTTCTGCACATGATCGCCACCTTTGTGACTAACTGGGGACTTCTGAC
TTTGTGCCTTGTGGTAGTCCTGGTTGTCACCAGTGTCGTCACTCTGCCTTACTTCCGTGGCCCTTGGCGGACAAGGCTGG
AGATCTTGCCTCCCTGGTCAATCTACAAAGCGCTCCACGGCTCAACGTTCCTCCTCAATATCGCGGTCATGCTGCGAGCA
AACATCGATCCGCTCGGAGCGTTGGACACGTTAAAGCGTGGGGCAAATCCGTGGCTGCGTGAACGCCTGGAAGCCGCCCA
CTACGGGGTTCGGATGGGTAAAAACTTTGGGGAGGCTTTAGATCTTTCCGGGCATGAATTCCCAGACCACGAAGCGATTC
AATTTCTGATTGTTCTCTCCACTACGCAGAGCTTCTCGGCTGCAGTGCACCGCTACAGCCTTCGCTGGTTGGAGATATCA
CTGAAACAGGTCGAGCGTTACGCAAAGACACTGTCCCTCGTATCCATGGTTCTGATCGGCCTGTTGATGATTCTGGTCAT
GGTCGGGGCCTACAGCATGACCGGCAATGCCACACAAGGCATGACGCACTGA

Upstream 100 bases:

>100_bases
AATACAGGACTGATTGACCCGCGCATGGCAGAGGCCGTAGTCGGTCCATTGGATTTTGACAGCTACATGCTGGATGCCGA
AGCGCCTGAGGCAGAAGTCC

Downstream 100 bases:

>100_bases
GCACTACACCCGTTACCCACATACCCAGGACCACACACATGCAAAACACCACTCACTCCGCTCGGGCGAACCAGATCGGT
TATATCTCGATTGAATTGCT

Product: type II secretion system protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein; Integral Membrane Protein; PilR Type IV Pilus Biosynthesis Protein; Type IV Pilus Integral Membrane Protein; Type IV Pilus Biogenesis Protein PilR; Type II Secretion System; Type IV Pilus Integral Inner Membrane Protein; Type II Secretion System F Domain Protein; Type II Secretion System F Domain-Containing Protein; Transmembrane Protein; Type IV Pilus Protein; Type IV Pilus Biosynthesis Protein; PilR Protein; General Protein Secretion Protein BfpE; Type IV Secretion System Protein PilR; Integral Membrane Protein PilR; Component Of Type II Secretion Apparatus; Type IV Pilus Transmembrane Protein PilR; Type II Secretory Pathway Component PulF; Type IV B Pilus Protein; Conjugal Transfer Protein; Type II Secretion System Protein F; PilR-Like Integral Membrane Protein

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLSKVMDAWSGLVDGFYRNQFGGNERIRLYESMTALLENGVPLDLAIDRIGSIYSDGGRRARHPIALASYGIGKAVDGGK
TLAQACLNWVPYQEHAVISAGEKSGNLIQAFSDCVRIIEARQKVMKLVVSTASYPVFVWSLMAYLLNVIATRVVPAMSRS
SNPEAWSGAPMVLHMIATFVTNWGLLTLCLVVVLVVTSVVTLPYFRGPWRTRLEILPPWSIYKALHGSTFLLNIAVMLRA
NIDPLGALDTLKRGANPWLRERLEAAHYGVRMGKNFGEALDLSGHEFPDHEAIQFLIVLSTTQSFSAAVHRYSLRWLEIS
LKQVERYAKTLSLVSMVLIGLLMILVMVGAYSMTGNATQGMTH

Sequences:

>Translated_363_residues
MLSKVMDAWSGLVDGFYRNQFGGNERIRLYESMTALLENGVPLDLAIDRIGSIYSDGGRRARHPIALASYGIGKAVDGGK
TLAQACLNWVPYQEHAVISAGEKSGNLIQAFSDCVRIIEARQKVMKLVVSTASYPVFVWSLMAYLLNVIATRVVPAMSRS
SNPEAWSGAPMVLHMIATFVTNWGLLTLCLVVVLVVTSVVTLPYFRGPWRTRLEILPPWSIYKALHGSTFLLNIAVMLRA
NIDPLGALDTLKRGANPWLRERLEAAHYGVRMGKNFGEALDLSGHEFPDHEAIQFLIVLSTTQSFSAAVHRYSLRWLEIS
LKQVERYAKTLSLVSMVLIGLLMILVMVGAYSMTGNATQGMTH
>Mature_363_residues
MLSKVMDAWSGLVDGFYRNQFGGNERIRLYESMTALLENGVPLDLAIDRIGSIYSDGGRRARHPIALASYGIGKAVDGGK
TLAQACLNWVPYQEHAVISAGEKSGNLIQAFSDCVRIIEARQKVMKLVVSTASYPVFVWSLMAYLLNVIATRVVPAMSRS
SNPEAWSGAPMVLHMIATFVTNWGLLTLCLVVVLVVTSVVTLPYFRGPWRTRLEILPPWSIYKALHGSTFLLNIAVMLRA
NIDPLGALDTLKRGANPWLRERLEAAHYGVRMGKNFGEALDLSGHEFPDHEAIQFLIVLSTTQSFSAAVHRYSLRWLEIS
LKQVERYAKTLSLVSMVLIGLLMILVMVGAYSMTGNATQGMTH

Specific function: Unknown

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40116; Mature: 40116

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKVMDAWSGLVDGFYRNQFGGNERIRLYESMTALLENGVPLDLAIDRIGSIYSDGGRR
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
ARHPIALASYGIGKAVDGGKTLAQACLNWVPYQEHAVISAGEKSGNLIQAFSDCVRIIEA
CCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
RQKVMKLVVSTASYPVFVWSLMAYLLNVIATRVVPAMSRSSNPEAWSGAPMVLHMIATFV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TNWGLLTLCLVVVLVVTSVVTLPYFRGPWRTRLEILPPWSIYKALHGSTFLLNIAVMLRA
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCCCHHHHHHHHHHHC
NIDPLGALDTLKRGANPWLRERLEAAHYGVRMGKNFGEALDLSGHEFPDHEAIQFLIVLS
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHEEEHEEE
TTQSFSAAVHRYSLRWLEISLKQVERYAKTLSLVSMVLIGLLMILVMVGAYSMTGNATQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
MTH
CCC
>Mature Secondary Structure
MLSKVMDAWSGLVDGFYRNQFGGNERIRLYESMTALLENGVPLDLAIDRIGSIYSDGGRR
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
ARHPIALASYGIGKAVDGGKTLAQACLNWVPYQEHAVISAGEKSGNLIQAFSDCVRIIEA
CCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
RQKVMKLVVSTASYPVFVWSLMAYLLNVIATRVVPAMSRSSNPEAWSGAPMVLHMIATFV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TNWGLLTLCLVVVLVVTSVVTLPYFRGPWRTRLEILPPWSIYKALHGSTFLLNIAVMLRA
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCCCHHHHHHHHHHHC
NIDPLGALDTLKRGANPWLRERLEAAHYGVRMGKNFGEALDLSGHEFPDHEAIQFLIVLS
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHEEEHEEE
TTQSFSAAVHRYSLRWLEISLKQVERYAKTLSLVSMVLIGLLMILVMVGAYSMTGNATQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
MTH
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA