Click here to switch to the map view.

The map label for this gene is 66044759

Identifier: 66044759

GI number: 66044759

Start: 1698449

End: 1698973

Strand: Reverse

Name: 66044759

Synonym: Psyr_1512

Alternate gene names: NA

Gene position: 1698973-1698449 (Counterclockwise)

Preceding gene: 66044760

Following gene: 66044758

Centisome position: 27.88

GC content: 56.95

Gene sequence:

>525_bases
ATGCAAAACACCACTCACTCCGCTCGGGCGAACCAGATCGGTTATATCTCGATTGAATTGCTCTTCGTTCTCATCGTTAT
CCTGATCGGGATGGGCTACGCCCTTTACAACGGTTGGGGCGCGATGGGCAGTTCGGACGTCAACAACGAACAGGGTAACG
TCGGTCAATTGATCGCGAACACTCGCAAGCTCAAAGGCAGTACCGGTTACGGAGCGTCAGGGACCGATCTGATCGCCCAG
CTCAGCTCGATACGTGGCCTGCCCAATATGTCGTTCTCCAGCGGCAAGCTCTACAACGCCTGGAGTGGCCAGGTCACTGT
GGTTGCCAACGGGATGACATTCACCGTGACCGAGGCCGGTTTGCCCCAAGATGCCTGTGTGACACTGGCCACGAAGATTG
GACGCGGGCAGAAGGTCACCACCTCTATCAATGGCGGCACAGCTGTGAACGGCGAGGTGAGTTCAGCTGCTGCCACCAGT
GGCTGCTCTACTGATAGCAACACGTTGGCTTGGACGGCCTACTGA

Upstream 100 bases:

>100_bases
TTCTGGTCATGGTCGGGGCCTACAGCATGACCGGCAATGCCACACAAGGCATGACGCACTGAGCACTACACCCGTTACCC
ACATACCCAGGACCACACAC

Downstream 100 bases:

>100_bases
GCATGAACCCAATTATCGACACGCCTTTTAGTGACCTCTACTTGGGGCCGGATTTTACGGACGTAAAAGGCCTGGATGGC
CAGAGCGGACGTGTCGAGGC

Product: prepilin

Products: NA

Alternate protein names: Type IV B Pilus Protein; Prepilin; Type IV Prepilin Domain-Containing Protein PilS

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQNTTHSARANQIGYISIELLFVLIVILIGMGYALYNGWGAMGSSDVNNEQGNVGQLIANTRKLKGSTGYGASGTDLIAQ
LSSIRGLPNMSFSSGKLYNAWSGQVTVVANGMTFTVTEAGLPQDACVTLATKIGRGQKVTTSINGGTAVNGEVSSAAATS
GCSTDSNTLAWTAY

Sequences:

>Translated_174_residues
MQNTTHSARANQIGYISIELLFVLIVILIGMGYALYNGWGAMGSSDVNNEQGNVGQLIANTRKLKGSTGYGASGTDLIAQ
LSSIRGLPNMSFSSGKLYNAWSGQVTVVANGMTFTVTEAGLPQDACVTLATKIGRGQKVTTSINGGTAVNGEVSSAAATS
GCSTDSNTLAWTAY
>Mature_174_residues
MQNTTHSARANQIGYISIELLFVLIVILIGMGYALYNGWGAMGSSDVNNEQGNVGQLIANTRKLKGSTGYGASGTDLIAQ
LSSIRGLPNMSFSSGKLYNAWSGQVTVVANGMTFTVTEAGLPQDACVTLATKIGRGQKVTTSINGGTAVNGEVSSAAATS
GCSTDSNTLAWTAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17939; Mature: 17939

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNTTHSARANQIGYISIELLFVLIVILIGMGYALYNGWGAMGSSDVNNEQGNVGQLIAN
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHH
TRKLKGSTGYGASGTDLIAQLSSIRGLPNMSFSSGKLYNAWSGQVTVVANGMTFTVTEAG
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCEEEEEECCC
LPQDACVTLATKIGRGQKVTTSINGGTAVNGEVSSAAATSGCSTDSNTLAWTAY
CCHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCHHCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MQNTTHSARANQIGYISIELLFVLIVILIGMGYALYNGWGAMGSSDVNNEQGNVGQLIAN
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHH
TRKLKGSTGYGASGTDLIAQLSSIRGLPNMSFSSGKLYNAWSGQVTVVANGMTFTVTEAG
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCEEEEEECCC
LPQDACVTLATKIGRGQKVTTSINGGTAVNGEVSSAAATSGCSTDSNTLAWTAY
CCHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCHHCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA