| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044718
Identifier: 66044718
GI number: 66044718
Start: 1657290
End: 1657826
Strand: Direct
Name: 66044718
Synonym: Psyr_1471
Alternate gene names: NA
Gene position: 1657290-1657826 (Clockwise)
Preceding gene: 66044709
Following gene: 66044722
Centisome position: 27.2
GC content: 50.47
Gene sequence:
>537_bases GTGTTCAAAGCGGAGATACACTTCGCCCAGGGGGAAGGTATTCCCCGCATGGGTGGTAAAGCGAAATTTTACGACAATCA ATGCATGAATCTGAACGCAGTAAGCATAACGCCTACAGCAGCAGTCAGCATGACGGCCATACGAATGGTGAGTTTCAGTT CGAGTCTAGACTCGAGAGTGTCGATGTCGGCTTTTGTCGCGAGTTGCGTTTGCATATCCGACTCCAGAGCATCGACGACT GCAGCGGCGCGGTCTTCCGGAACATCGATTGAAATCAATGCTTGGTACAGCGCAATACTGCTTTTCATGAAGGTCTCCTG CTGGGCACGAGACCAACCCTACGGGAAAGGTCCCGATGGGGTGAGAGAATCATTGTGCATCCATCAACCAGATAAACTGA TCAACCGTTCGCGCTTCCGAATGCTTTGCGAACTGGGGGTTGGATTAATGCGAAAAACGCATCGTAGTCATGAAATCCAG ACTACCTCGGGCATGTTGCTGACAACGTCAGCGGTACATGGCTTCAGAATGATGTAA
Upstream 100 bases:
>100_bases CACTTCACGAATGCGGTTGAGATAGCCAATGCCGACGGTGTGCAGGTCGAAGTATTTGGTTTCGTTGGTAGAATTGCTCA TGATGTATCTCCAGTTTTGA
Downstream 100 bases:
>100_bases GCCTGATCCCTTTGTCAATCCTCCAAATGAAAAAGCCCTTCAATGAATGAGGGGCTAGTCAGGGAGGGGAGTATCAAGCA ATGAGCTGGTCCAAAGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MFKAEIHFAQGEGIPRMGGKAKFYDNQCMNLNAVSITPTAAVSMTAIRMVSFSSSLDSRVSMSAFVASCVCISDSRASTT AAARSSGTSIEINAWYSAILLFMKVSCWARDQPYGKGPDGVRESLCIHQPDKLINRSRFRMLCELGVGLMRKTHRSHEIQ TTSGMLLTTSAVHGFRMM
Sequences:
>Translated_178_residues MFKAEIHFAQGEGIPRMGGKAKFYDNQCMNLNAVSITPTAAVSMTAIRMVSFSSSLDSRVSMSAFVASCVCISDSRASTT AAARSSGTSIEINAWYSAILLFMKVSCWARDQPYGKGPDGVRESLCIHQPDKLINRSRFRMLCELGVGLMRKTHRSHEIQ TTSGMLLTTSAVHGFRMM >Mature_178_residues MFKAEIHFAQGEGIPRMGGKAKFYDNQCMNLNAVSITPTAAVSMTAIRMVSFSSSLDSRVSMSAFVASCVCISDSRASTT AAARSSGTSIEINAWYSAILLFMKVSCWARDQPYGKGPDGVRESLCIHQPDKLINRSRFRMLCELGVGLMRKTHRSHEIQ TTSGMLLTTSAVHGFRMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19515; Mature: 19515
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKAEIHFAQGEGIPRMGGKAKFYDNQCMNLNAVSITPTAAVSMTAIRMVSFSSSLDSRV CCCEEEEEECCCCCCCCCCCCEECCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHH SMSAFVASCVCISDSRASTTAAARSSGTSIEINAWYSAILLFMKVSCWARDQPYGKGPDG HHHHHHHHHHEECCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCH VRESLCIHQPDKLINRSRFRMLCELGVGLMRKTHRSHEIQTTSGMLLTTSAVHGFRMM HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCEECC >Mature Secondary Structure MFKAEIHFAQGEGIPRMGGKAKFYDNQCMNLNAVSITPTAAVSMTAIRMVSFSSSLDSRV CCCEEEEEECCCCCCCCCCCCEECCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHH SMSAFVASCVCISDSRASTTAAARSSGTSIEINAWYSAILLFMKVSCWARDQPYGKGPDG HHHHHHHHHHEECCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCH VRESLCIHQPDKLINRSRFRMLCELGVGLMRKTHRSHEIQTTSGMLLTTSAVHGFRMM HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA